BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0467300 Os09g0467300|AK064135
(390 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0467300 Protein of unknown function DUF6, transmembran... 598 e-171
Os09g0467400 Protein of unknown function DUF6, transmembran... 284 6e-77
Os09g0467500 Protein of unknown function DUF6, transmembran... 194 7e-50
Os03g0187800 Protein of unknown function DUF250 domain cont... 171 7e-43
Os02g0689200 Protein of unknown function DUF250 domain cont... 142 4e-34
Os04g0587300 Similar to Purine permease-like protein 135 4e-32
Os01g0680200 Protein of unknown function DUF6, transmembran... 129 4e-30
Os09g0548600 114 1e-25
Os05g0556800 Protein of unknown function DUF250 domain cont... 108 6e-24
Os04g0587400 Protein of unknown function DUF250 domain cont... 97 2e-20
Os01g0504100 Protein of unknown function DUF6, transmembran... 86 5e-17
>Os09g0467300 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 390
Score = 598 bits (1541), Expect = e-171, Method: Compositional matrix adjust.
Identities = 308/390 (78%), Positives = 308/390 (78%)
Query: 1 MEVEAATTQRQPCKNAITTKXXXXXXXXLSTGRLFRSPLLVVNFVLMVVGSACGPLLLRA 60
MEVEAATTQRQPCKNAITTK LSTGRLFRSPLLVVNFVLMVVGSACGPLLLRA
Sbjct: 1 MEVEAATTQRQPCKNAITTKQQQQQQQQLSTGRLFRSPLLVVNFVLMVVGSACGPLLLRA 60
Query: 61 YFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEVEDDXXXXXXXXTPLFLMTPR 120
YFLRGGNRKWLSSLLQTAGWPLLLAPLCFSY EVEDD TPLFLMTPR
Sbjct: 61 YFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYSSRRRRREVEDDGAGAGAAATPLFLMTPR 120
Query: 121 LLVASAVVGLMTGVDDXXXXXXXXXXPVSTSSILISTQXXXXXXXXXXXVRQRFTAFSVN 180
LLVASAVVGLMTGVDD PVSTSSILISTQ VRQRFTAFSVN
Sbjct: 121 LLVASAVVGLMTGVDDLLYAYGLAYLPVSTSSILISTQLAFTAAFALLLVRQRFTAFSVN 180
Query: 181 AVVLLSVGAAMLGMNAGGDRPAGVSRAQYCXXXXXXXXXXXLYGLVLPVMELSQAHHAAA 240
AVVLLSVGAAMLGMNAGGDRPAGVSRAQYC LYGLVLPVMELSQAHHAAA
Sbjct: 181 AVVLLSVGAAMLGMNAGGDRPAGVSRAQYCAGFAMTLAAAALYGLVLPVMELSQAHHAAA 240
Query: 241 RGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGEAHEFXXXXXXXXXXXXXXXX 300
RGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGEAHEF
Sbjct: 241 RGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGEAHEFGLGQAGYYLLLAGSAA 300
Query: 301 MYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFV 360
MYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFV
Sbjct: 301 MYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFV 360
Query: 361 SYFYGEVXXXXXXXXXXXSDEPPKPDHLDP 390
SYFYGEV SDEPPKPDHLDP
Sbjct: 361 SYFYGEVRAAKAAHRRRHSDEPPKPDHLDP 390
>Os09g0467400 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 361
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 200/334 (59%), Gaps = 11/334 (3%)
Query: 32 GRLFRSPLLVVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSY 91
GR R L+ +N ++VVG+ GPL+ R YF +GG+R+WLS+ LQTAGWPLLL P+ SY
Sbjct: 20 GRAARWLLVALNCGMLVVGTTGGPLISRLYFSKGGHRQWLSAWLQTAGWPLLLVPVAASY 79
Query: 92 XXXXXXXEVEDDXXXXXXXXTPLFLMTPRLLVASAVVGLMTGVDDXXXXXXXXXXPVSTS 151
D PLFL R+L+A +G + G DD PVSTS
Sbjct: 80 LSR----RARDRR-------APLFLTPTRVLLAGVGLGFLNGADDFIYAYGLAYLPVSTS 128
Query: 152 SILISTQXXXXXXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRPAGVSRAQYCX 211
+ILISTQ VRQRFTA ++NAV LL++GA +LG++A DRPAGV+ +Y
Sbjct: 129 AILISTQLAFTVFFACLIVRQRFTAATLNAVALLTIGAVVLGLHASKDRPAGVTSGKYWM 188
Query: 212 XXXXXXXXXXLYGLVLPVMELSQAHHAAARGAVTYTLVMEMQLVIGFVATAFSAVGMLVN 271
LYGL+LP++EL+ H A AVTY LVMEMQLV+GF ATAF VGM+VN
Sbjct: 189 GFFLTLGAAALYGLILPLVELAYKHAAGGGRAVTYALVMEMQLVMGFFATAFCTVGMVVN 248
Query: 272 NDFHAIPGEAHEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIMTVLIPV 331
DF AIP EA ++ +++ FF+G +G IF LLAG+I+ V IP+
Sbjct: 249 KDFQAIPREAKQYELGEARYYVVLVFNAVLWEFFFVGAVGVIFCVHTLLAGIIIAVFIPI 308
Query: 332 TEVLAVMFFHEPFNGTKGVALALSLWGFVSYFYG 365
TEVL V+F HE F+ KGVAL LSLWG SY YG
Sbjct: 309 TEVLGVIFLHEKFSSEKGVALVLSLWGLASYSYG 342
>Os09g0467500 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 253
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 155/275 (56%), Gaps = 23/275 (8%)
Query: 1 MEVEAATTQRQPCKNAITTKXXXXXXXXLSTGRLFRSPLLVVNFVLMVVGSACGPLLLRA 60
M+VEA CK+ + + GR R L+ +N +++VG+ GPL+ R
Sbjct: 1 MDVEAT------CKDVVHEQAAP------GRGRAARWLLVALNCGMLMVGTTGGPLISRL 48
Query: 61 YFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEVEDDXXXXXXXXTPLFLMTPR 120
YF +GG+R+WLS+ L+TAGWPLLL P+ SY D PLFL R
Sbjct: 49 YFSKGGHRQWLSAWLETAGWPLLLVPVSASYLGR----RARDRG-------APLFLTPRR 97
Query: 121 LLVASAVVGLMTGVDDXXXXXXXXXXPVSTSSILISTQXXXXXXXXXXXVRQRFTAFSVN 180
+L+A +G++TG DD PVSTS+IL ST VRQR TA ++N
Sbjct: 98 VLLACVGLGVLTGADDFIYAYGLDYLPVSTSAILTSTHLAFTVFFACLIVRQRLTAATLN 157
Query: 181 AVVLLSVGAAMLGMNAGGDRPAGVSRAQYCXXXXXXXXXXXLYGLVLPVMELSQAHHAAA 240
AV LL++GA +LG++ DRPAGV+ +Y LYGL+LP++EL+ H AA
Sbjct: 158 AVALLTIGAVVLGLHVSKDRPAGVTNGKYWMGFFLIIGAAALYGLILPLVELAYKHVAAR 217
Query: 241 RGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFH 275
AVTY LVMEMQLV+GF ATAF VGM+VN DF
Sbjct: 218 GRAVTYALVMEMQLVMGFFATAFCTVGMVVNKDFQ 252
>Os03g0187800 Protein of unknown function DUF250 domain containing protein
Length = 399
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 164/313 (52%), Gaps = 20/313 (6%)
Query: 59 RAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEVEDDXXXXXXXXTPLFLMT 118
R YF+ GG R WLS+ LQ +GWPLLL PLC S L+
Sbjct: 68 RVYFVHGGTRLWLSATLQISGWPLLLPPLCVSLYRGRRHGIGN--------------LLL 113
Query: 119 PRLLV-ASAVVGLMTGVDDXXXXXXXXXXPVSTSSILISTQXXXXXXXXXXXVRQRFTAF 177
PR LV A+AV+G + V P+STSS+L++TQ V RFT F
Sbjct: 114 PRRLVGAAAVLGGLYAVSCFVYALGSQALPLSTSSLLLATQLAFTAVFAFLFVGLRFTPF 173
Query: 178 SVNAVVLLSVGAAMLGMNAGGDRPAGVSRAQYCXXXXXXXXXXXLYGLVLPVMELSQAHH 237
S NAVVLL++G A+LG+ +PAG S Y L GLV+P++E++ A +
Sbjct: 174 SANAVVLLTIGPAVLGVGPSSGKPAGESSRAYWTGFCEAIGAAALAGLVIPLVEVATARY 233
Query: 238 A-----AARGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGEAHEFXXXXXXXX 292
AAR Y VM+MQ V+G TA +GM + DF A+ EA F
Sbjct: 234 GRRTGPAARVPPPYATVMQMQAVMGAAGTAVCVLGMAIKGDFQAVAREAAAFGLGAANYY 293
Query: 293 XXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVAL 352
+Q LG +G I S+LLAG+++ VL+P+++VLAV+F HE F+GTKG+AL
Sbjct: 294 LVLAWDAVSWQLLNLGIMGLITCASSLLAGIMIAVLLPLSQVLAVIFLHEKFDGTKGIAL 353
Query: 353 ALSLWGFVSYFYG 365
LSLWGF SY YG
Sbjct: 354 VLSLWGFASYLYG 366
>Os02g0689200 Protein of unknown function DUF250 domain containing protein
Length = 382
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 11/321 (3%)
Query: 42 VNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEVE 101
VN ++ G LL R Y+ +GGN KW+S+ +QTAG+P+L L + V
Sbjct: 51 VNMFFLIAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPILFIALFLFHSKTSSTQTVT 110
Query: 102 DDXXXXXXXXTPLFLMTPRLLVASAVVGLMTGVDDXXXXXXXXXXPVSTSSILISTQXXX 161
+ P++ + V+GL+ DD PVST S++ ++Q
Sbjct: 111 SSPAPT--------ISIPKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 162
Query: 162 XXXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRPAGVSRAQYCXXXXXXXXXXX 221
Q+FT N+VVLL+ A++LG++ +S +Y
Sbjct: 163 NAVFSYFLNAQKFTPLIFNSVVLLTFSASLLGVDEDSQGTTSISHGKYILGFLLTLGASA 222
Query: 222 LYGLVLPVMELSQAHHAAARGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGEA 281
Y L+L +M+++ T+++V+ MQ+ VAT S VG+ + ++ + GE
Sbjct: 223 TYSLILSLMQVTFEKVIKRE---TFSVVLNMQIYTALVATLASLVGLFASGEWMTLQGEM 279
Query: 282 HEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFFH 341
H F +Q +G +G IF S+L + VI T+ +P+ V AV+FFH
Sbjct: 280 HAFQSGKLSYVMTLLWTAISWQVASVGVVGLIFVVSSLFSNVISTLALPIIPVFAVIFFH 339
Query: 342 EPFNGTKGVALALSLWGFVSY 362
+ +G K +A+ +++WGF+SY
Sbjct: 340 DKMDGVKIIAMLMAIWGFMSY 360
>Os04g0587300 Similar to Purine permease-like protein
Length = 376
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 29/339 (8%)
Query: 32 GRLFRS-PLLVVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFS 90
G+ FR ++ V+ ++ G LL R Y+ +GG KW+S+ ++TAG+P+L L F
Sbjct: 41 GKPFRWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGFPILFFTLFF- 99
Query: 91 YXXXXXXXEVEDDXXXXXXXXTPLFLMTPRLLVASAVVGLMTGVDDXXXXXXXXXXPVST 150
TP+ +L V V+GL+ DD P ST
Sbjct: 100 ----------FPSKSPSSCTNTPM----AKLAVIYIVLGLIIAADDMMYTGGLKYLPAST 145
Query: 151 SSILISTQXXXXXXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRPAGVSRAQYC 210
S++ ++Q Q+ T N+VVLL++ A+++G++ GVS +Y
Sbjct: 146 YSLICASQLAFNVVFSYVLNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYL 205
Query: 211 XXXXXXXXXXXLYGLVLPVMELS-----QAHHAAARGAVTYTLVMEMQLVIGFVATAFSA 265
Y L+L +M+L+ + H T++ V+ MQ+ VATA S
Sbjct: 206 LGFVLTLGASCTYSLILALMQLTFETIIKKH--------TFSAVLNMQIYTALVATAASV 257
Query: 266 VGMLVNNDFHAIPGEAHEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIM 325
VG+ + ++ ++ GE + F +Q +G +G IF SAL + VI
Sbjct: 258 VGLFASGEWRSLRGEMNAFRSGQFSYLMTLLWAAVSWQVANIGVLGLIFEVSALFSNVIS 317
Query: 326 TVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFVSYFY 364
TV +PV AV+ FH+ NG K VA+ +++WGF+SY +
Sbjct: 318 TVSLPVIPFFAVVVFHDRMNGVKIVAMLIAIWGFISYLF 356
>Os01g0680200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 387
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 24/326 (7%)
Query: 43 NFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEVED 102
N+ ++ GS LL R YF GG+ +W+++L+Q+ G+P LL P+
Sbjct: 40 NYAALLGGSVASSLLSRYYFAHGGHNRWVATLVQSVGFPFLLVPVY-------------- 85
Query: 103 DXXXXXXXXTPLFLMTPRLLVASAVVGLMTGVDDXXXXXXXXXXPVSTSSILISTQXXXX 162
P T RLL A V+G++ GV++ PVSTSS+L+STQ
Sbjct: 86 -AGRSPSQPRPFAWFTRRLLAACVVIGVLMGVNNLLFSYSSSYLPVSTSSLLLSTQLAFT 144
Query: 163 XXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAG--GDRPAGVSRAQYCXXXXXXXXXX 220
VR ++NAVVLL++ + ++ + + G++P G SRA+Y
Sbjct: 145 LVLAAIIVRHPLNFSNLNAVVLLTLSSVLIALRSSDSGEQPGGGSRARYFVGFAVTLGAA 204
Query: 221 XLYGLVLPVMELSQAHHAAARGAVTYTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGE 280
L+ LPVMEL + A G + + +E+Q+++ ATA + G+ + E
Sbjct: 205 GLFAAYLPVMEL--VYRKAVSGG--FRMAVEVQVIMQAAATALAVAGLAAAGGWKE---E 257
Query: 281 AHEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFF 340
+ +Q +GT G ++ S+L +GV MT ++ + V+ F
Sbjct: 258 LARWDLSPAAYWAVLAALVATWQACLMGTAGMVYLTSSLHSGVCMTAVLTANVIGGVVVF 317
Query: 341 HEPFNGTKGVALALSLWGFVSYFYGE 366
+PF K VA L +WGF SY YGE
Sbjct: 318 RDPFGADKAVATVLCVWGFSSYLYGE 343
>Os09g0548600
Length = 346
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 148/349 (42%), Gaps = 60/349 (17%)
Query: 41 VVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEV 100
+V+ ++++VG A PLL R Y+ GGN W+ +L Q+AG PLL+ P
Sbjct: 1 MVDMLMLLVGEAMAPLLTRLYYNSGGNSLWMVTLAQSAGAPLLVIP-------------- 46
Query: 101 EDDXXXXXXXXTPLFLMTPR---------------LLVASAVVGLMTGVDDXXXXXXXXX 145
FL+TPR ++ +GL+ G D+
Sbjct: 47 --------------FLLTPRAAAVGEPRPAPAASKMVAICVALGLVVGCDNLMYSYAMLY 92
Query: 146 XPVSTSSILISTQXXXXXXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRPAGV- 204
PVST S+L +TQ QRFT VN+VV+L+ AA+LG+ D P+
Sbjct: 93 LPVSTFSLLAATQLAFNAVTSRLINAQRFTPLVVNSVVVLTFSAALLGV----DDPSSSV 148
Query: 205 ---------SRAQYCXXXXXXXXXXXLYGLVLPVMELSQAHHAAARGAVTYTLVMEMQLV 255
R ++ +Y L+L + E A GA T V++MQ+
Sbjct: 149 GGGAGGDAVQRGKHAAGVVLTLSASAVYALILSLFE---ATFDKVIGAATPRWVLKMQIS 205
Query: 256 IGFVATAFSAVGMLVNNDFHAIPGEAHEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFY 315
VA SA + + ++ I GE F +Q LG + I
Sbjct: 206 TNAVAATVSATALFASGEWRTIGGEMAAFKGGKAAYAATVVGVAVGWQAATLGAVRLIAR 265
Query: 316 GSALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFVSYFY 364
S+L A V T+ +P+ VLAV F + GTK VA+ +++WGF+SY Y
Sbjct: 266 VSSLFANVTGTLALPMVPVLAVALFGDKMTGTKVVAMLMAVWGFLSYVY 314
>Os05g0556800 Protein of unknown function DUF250 domain containing protein
Length = 394
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 147/340 (43%), Gaps = 24/340 (7%)
Query: 33 RLFRSPLLVVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYX 92
R R LL+ N+ ++VGS LL R YF GG +W+ +L+Q+AG+PLL+A
Sbjct: 26 RRRRMLLLMANYAALLVGSVASSLLSRFYFTHGGRNRWVVTLVQSAGFPLLVAGAL---- 81
Query: 93 XXXXXXEVEDDXXXXXXXXTPLFLMTPRLLVASAVVGLMTGVDDXXXXXXXXXXPVSTSS 152
P ++ R L V+G + G ++ PVSTSS
Sbjct: 82 ----------AGGRPASAPRPFTWLSRRFLAVCLVIGALMGANNLLFAYSTSLLPVSTSS 131
Query: 153 ILISTQXXXXXXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRPAG------VSR 206
+L+STQ VR T ++NAVVLL++ + +L + +G R
Sbjct: 132 LLLSTQLAFTLVLAVVIVRHPVTFVNLNAVVLLTLSSVLLALRSGDSGETAEGGVGGGGR 191
Query: 207 AQYCXXXXXXXXXXXLYGLVLPVMELSQAHHAAARGAVTYTLVMEMQLVIGFVATAFSAV 266
Y L+ LPVMEL + A G + L +E+Q V+ +A+ +AV
Sbjct: 192 KSYLVGFVVTLGAAGLFSAYLPVMEL--VYREAVSGG--FVLAVEVQAVMQAMASLIAAV 247
Query: 267 GMLVNNDFHAIPGEAHEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIMT 326
G+ + + +Q F+GT G I+ S+L +GV M
Sbjct: 248 GLAASGGVADDVSGWVDGGSSPAVYWAVVATLVLTWQACFMGTAGVIYLTSSLHSGVCMA 307
Query: 327 VLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFVSYFYGE 366
++ + + V F +PF K +A AL WGF SY YGE
Sbjct: 308 AVLTLNVLGGVAVFGDPFGAEKALATALCAWGFSSYLYGE 347
>Os04g0587400 Protein of unknown function DUF250 domain containing protein
Length = 408
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 39/347 (11%)
Query: 29 LSTGRLFRSPLLVVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLC 88
+S+ RL +++ N V ++ G + LL R Y+ +GG WL++++Q+ G PL + PL
Sbjct: 64 VSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAV-PLL 122
Query: 89 FSYXXXXXXXEVEDDXXXXXXXXTPLFLMTPRLLVASAV---VGLMTGVDDXXXXXXXXX 145
+ +P+ P LL +A+ +G++ D+
Sbjct: 123 LYFRRPEA---------------SPV--ARPPLLKIAAIYAGLGVLLAGDNLMYSYALLY 165
Query: 146 XPVSTSSILISTQXXXXXXXXXXXVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRP-AGV 204
P+ST S++ +TQ ++RFTA +N+VVLL+ AA++G++ + + V
Sbjct: 166 LPLSTYSLVCATQLCFNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSV 225
Query: 205 SRAQYCXXXXXXXXXXXLYGLVLPVMEL-------SQAHHAAARGAVTYTLVMEMQLVIG 257
++ + L+L +M+L S A HA V+E+QL
Sbjct: 226 PEGKFALGFVLALSASAAFALILSLMQLTFDTVLRSNAAHA----------VLELQLWSN 275
Query: 258 FVATAFSAVGMLVNNDFHAIPGEAHEFXXXXXXXXXXXXXXXXMYQCFFLGTIGAIFYGS 317
A+ S G+ ++ ++ ++ E + +Q +G +G + S
Sbjct: 276 AAASCVSVAGLFISGEWSSLTAEMDGYKKGEVAYGMTLAWTAISWQLATMGMVGLVATVS 335
Query: 318 ALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFVSYFY 364
+L VI TV +P++ ++AV+F + +G K +A+ + +WGF+SY Y
Sbjct: 336 SLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVIAMLIGIWGFLSYVY 382
>Os01g0504100 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 379
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 141/314 (44%), Gaps = 28/314 (8%)
Query: 59 RAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYXXXXXXXEVEDDXXXXXXXXTPLFLMT 118
R YF GG +WL++L+Q+AG+P LL PL P T
Sbjct: 68 RFYFAHGGADRWLATLVQSAGFPALLLPL----------------MCARRPASRPFAGFT 111
Query: 119 PRLLVASAVVGLMTGVDDXXXXXXXXXXPVSTSSILISTQXXXXXXXXXXXVRQRFTAFS 178
PRL++ ++GL+ G+++ PVST+++L+S Q VR + +
Sbjct: 112 PRLVMYCVLLGLVMGLNNLLYSCGTSYLPVSTTALLLSMQLAFTLALAAALVRVPLSFAN 171
Query: 179 VNAVVLLSVGAAMLGMNAGGDRPAGVSRA---QYCXXXXXXXXXXXLYGLVLPVMELSQA 235
NAVVLL++ + +L + G G + A Y L+ L LP EL
Sbjct: 172 FNAVVLLTLSSLLLALRHGAGGGGGGADATSPDYLVGVAATLGAALLFALYLPAAELVYR 231
Query: 236 HHAAARGAVT-YTLVMEMQLVIGFVATAFSAVGMLVNNDFHAIPGEAHE--FXXXXXXXX 292
H G VT + +V+E Q+++ VATA A GM V++ P + E +
Sbjct: 232 H-----GGVTGFRMVVEAQVIMEAVATAVGAAGM-VSSAGGKWPWDGVEATWDLSPAAYY 285
Query: 293 XXXXXXXXMYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVAL 352
+Q FLGT G +F ++L G+ MT L+ V V+ F + F K VA+
Sbjct: 286 AVVGAAVLSWQLCFLGTAGTVFLTTSLHGGICMTALLAVNVAGGVVVFGDEFGPEKAVAM 345
Query: 353 ALSLWGFVSYFYGE 366
L LW F SY YGE
Sbjct: 346 LLCLWAFSSYVYGE 359
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,356,171
Number of extensions: 276987
Number of successful extensions: 719
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 692
Number of HSP's successfully gapped: 11
Length of query: 390
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 287
Effective length of database: 11,657,759
Effective search space: 3345776833
Effective search space used: 3345776833
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)