BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0272900 Os09g0272900|AK111610
(198 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0272900 Similar to Skp1 (Fragment) 321 2e-88
Os07g0145300 143 9e-35
Os07g0144800 130 8e-31
Os09g0273800 Similar to Fimbriata-associated protein (Fragm... 129 2e-30
Os09g0274700 125 2e-29
Os09g0274800 125 3e-29
Os07g0144900 124 4e-29
Os08g0375700 SKP1 component family protein 124 6e-29
Os06g0113800 Similar to Kinetechore (Skp1p-like) protein-like 122 2e-28
Os09g0274432 119 2e-27
Os11g0456300 Similar to Fimbriata-associated protein (Fragm... 114 4e-26
Os09g0272700 112 2e-25
Os08g0375500 110 7e-25
Os07g0409500 SKP1 component family protein 93 1e-19
Os09g0275200 Similar to Fimbriata-associated protein (Fragm... 92 2e-19
Os07g0625500 Similar to Fimbriata-associated protein (Fragm... 89 3e-18
Os07g0624900 85 4e-17
Os07g0625000 77 6e-15
Os07g0625200 69 2e-12
>Os09g0272900 Similar to Skp1 (Fragment)
Length = 198
Score = 321 bits (823), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/198 (80%), Positives = 160/198 (80%)
Query: 1 MITLSSPVMCFIHASSVFDRSMXXXXXXXXXXXXXGEMVTLISSDGARFEVPEAAVRLSQ 60
MITLSSPVMCFIHASSVFDRSM GEMVTLISSDGARFEVPEAAVRLSQ
Sbjct: 1 MITLSSPVMCFIHASSVFDRSMAAPAAPQETNAAAGEMVTLISSDGARFEVPEAAVRLSQ 60
Query: 61 TVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHXXXXXXXXXXXXXKTSKEEEELM 120
TVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH KTSKEEEELM
Sbjct: 61 TVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHASAAAAAINADTAKTSKEEEELM 120
Query: 121 MKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQRLADMIKGKTSEQMRQTLGITND 180
MKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQRLADMIKGKTSEQMRQTLGITND
Sbjct: 121 MKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQRLADMIKGKTSEQMRQTLGITND 180
Query: 181 FTPXXXXXXXXXXXXQWL 198
FTP QWL
Sbjct: 181 FTPEEEEEFRREDEEQWL 198
>Os07g0145300
Length = 164
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 95/147 (64%), Gaps = 15/147 (10%)
Query: 37 EMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTK 96
+ + LISSDG F VP AA LSQ V + M +DD NG+PLPNVA VLAKV+EYC K
Sbjct: 18 DTILLISSDGEHFNVPSAAASLSQLVSN-MIEDDC-TTNGVPLPNVASKVLAKVIEYCIK 75
Query: 97 HXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLAC 156
H + EEEE +KSFD EFI VD +MLY LL A++ M I+ L+DL C
Sbjct: 76 HA-------------AAGEEEEKDLKSFDAEFIDVDKNMLYDLLLASNFMNIKSLLDLCC 122
Query: 157 QRLADMIKGKTSEQMRQTLGITNDFTP 183
Q A++IKGK+ EQ+R+ GI NDFTP
Sbjct: 123 QHTANLIKGKSPEQIRKEFGIKNDFTP 149
>Os07g0144800
Length = 157
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 95/148 (64%), Gaps = 16/148 (10%)
Query: 37 EMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTK 96
+ + LISSDG F VP AA LSQ V + ++ D NG+PLPNVA VLAKV+EYC K
Sbjct: 11 DTILLISSDGEHFNVPSAAASLSQLVSNMIEND--CTTNGVPLPNVASKVLAKVIEYCVK 68
Query: 97 HXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFIL-VDNHMLYSLLTAADAMRIQGLMDLA 155
H + E+EE +KSFD EF++ VD +MLY LL A++ + I+ L+DL
Sbjct: 69 H-------------AAAAEDEEKELKSFDAEFMIDVDKNMLYGLLLASNFLNIKSLLDLC 115
Query: 156 CQRLADMIKGKTSEQMRQTLGITNDFTP 183
CQ A++IKGK+ EQ+R+ GI NDFTP
Sbjct: 116 CQHTANLIKGKSPEQIRKEFGIKNDFTP 143
>Os09g0273800 Similar to Fimbriata-associated protein (Fragment)
Length = 167
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 92/145 (63%), Gaps = 8/145 (5%)
Query: 39 VTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHX 98
+ LISSDG F+V EA +S+ V M +DD NG+PLPNVA +VLAKV++YC KH
Sbjct: 15 ILLISSDGQHFQVTEAEASMSKLV-SNMIEDDCTE-NGVPLPNVASNVLAKVLDYCKKHA 72
Query: 99 XXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQR 158
K ++EL KSFD FI VDN ML+ L+ AA+ + + L+DLACQ
Sbjct: 73 AAAAAAAEDVAVK----DQEL--KSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQH 126
Query: 159 LADMIKGKTSEQMRQTLGITNDFTP 183
AD+IKGKT +++R T GI NDFTP
Sbjct: 127 TADLIKGKTVQEIRDTFGIVNDFTP 151
>Os09g0274700
Length = 165
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 92/145 (63%), Gaps = 10/145 (6%)
Query: 39 VTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHX 98
+ LISSDG F+V EA +S+ V + + +D NG+PLPNVA +VLAKV+EYC KH
Sbjct: 15 ILLISSDGQHFQVTEAEASMSKLVSNMI--EDGCTENGVPLPNVASNVLAKVLEYCKKHA 72
Query: 99 XXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQR 158
K++E +KSFD FI VDN ML++L+ AA+ + + L+DLACQ
Sbjct: 73 AAAAAEDVAV-----KDQE---LKSFDASFIDVDNTMLFNLILAANYLNVPSLLDLACQH 124
Query: 159 LADMIKGKTSEQMRQTLGITNDFTP 183
AD+IKGKT +++R GI NDFTP
Sbjct: 125 TADLIKGKTVQEIRDMFGIVNDFTP 149
>Os09g0274800
Length = 172
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
Query: 37 EMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTK 96
+M+ LISSDGA+FE+ EAA LS+T L M +DD IPL NVA D+LAKVVEYC K
Sbjct: 16 KMILLISSDGAKFELSEAAASLSKT-LGNMIEDDCATNGAIPLANVASDILAKVVEYCNK 74
Query: 97 HXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLAC 156
H K S EEE + FD EF+ VD L+ L+ AA+ + + L++L C
Sbjct: 75 HAAATATATAAA--KASGEEE---LSKFDAEFVSVDRKKLFGLINAANFLNMPCLLELTC 129
Query: 157 QRLADMIKGKTSEQMRQTLGITNDFTP 183
QR AD+IK EQ+R+ GI NDFTP
Sbjct: 130 QRAADLIKDMMPEQVREVFGIENDFTP 156
>Os07g0144900
Length = 172
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 36 GEMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCT 95
G+M+ LIS+DG RFEV EA SQ ++ M +DD NG+ LPNV GD+L VV+YC
Sbjct: 14 GKMIILISADGKRFEVTEAVASQSQ-LISNMIEDDCTE-NGVRLPNVDGDILTMVVDYCN 71
Query: 96 KHXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFI-LVDNHMLYSLLTAADAMRIQGLMDL 154
H K S EEEL K FD E + ++N +L+ L+ AA+ + I+ L+D+
Sbjct: 72 MHAGDAAAAGDTM--KASSTEEEL--KKFDAELVQALENPVLFKLILAANFLNIKSLLDM 127
Query: 155 ACQRLADMIKGKTSEQMRQTLGITNDFTP 183
CQR+ADM+ GKT EQMR+T I NDFTP
Sbjct: 128 TCQRVADMMSGKTPEQMRETFSIENDFTP 156
>Os08g0375700 SKP1 component family protein
Length = 169
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 5/147 (3%)
Query: 38 MVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH 97
M+ LISSDG RFE+ EAA S+T L M +DD NG+PLPNV VLAKVVEY KH
Sbjct: 11 MILLISSDGERFELSEAAASQSKT-LSHMIEDDCTD-NGVPLPNVTAVVLAKVVEYFKKH 68
Query: 98 XXXXXX-XXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLAC 156
+K EEEL KSFD EF+ VD M++ L+ AA+ + Q L+DL C
Sbjct: 69 AAVTPKPATEAVAADKAKREEEL--KSFDAEFVDVDRTMVFELILAANFLNAQDLLDLTC 126
Query: 157 QRLADMIKGKTSEQMRQTLGITNDFTP 183
Q AD+IK + E++R+ ITNDFTP
Sbjct: 127 QHAADLIKDMSVEEVREVFNITNDFTP 153
>Os06g0113800 Similar to Kinetechore (Skp1p-like) protein-like
Length = 166
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 93/149 (62%), Gaps = 9/149 (6%)
Query: 37 EMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDD--YNAINGIPLPNVAGDVLAKVVEYC 94
+M+ +ISSDG FE+ EAA +S+ +L M +D + GI LPNVAG LAKV+EYC
Sbjct: 11 KMIKVISSDGEAFEMTEAAASMSRILL-HMIEDGCTGDGGAGITLPNVAGSALAKVIEYC 69
Query: 95 TKHXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDL 154
TKH + +KEE +K FD EF+ V MLY L+ AA+ M ++GL+ L
Sbjct: 70 TKHAIAAAEGSSSS--RKAKEE----LKKFDVEFMEVGIDMLYDLIMAANFMGVEGLLSL 123
Query: 155 ACQRLADMIKGKTSEQMRQTLGITNDFTP 183
A QR A++IKGK+ EQ+R+ GI ND TP
Sbjct: 124 AAQRTAELIKGKSPEQIREMFGIKNDHTP 152
>Os09g0274432
Length = 167
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 11/147 (7%)
Query: 37 EMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTK 96
+M+ L+SSDG +FE+ EAA LS+T L M +DD IPL NVA D+LA VVEYC +
Sbjct: 16 KMILLVSSDGVKFELSEAAASLSKT-LGNMIEDDCATNGAIPLANVAADILAMVVEYCNR 74
Query: 97 HXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLAC 156
H S +EE +++ FD EF+ +D L+ L+ AA+ + + L++L C
Sbjct: 75 HAAAAA--------NASGQEE--LIRKFDAEFVNIDRKKLFGLINAANFLNMPCLLELTC 124
Query: 157 QRLADMIKGKTSEQMRQTLGITNDFTP 183
QR AD+IK EQ+R+ GI NDFTP
Sbjct: 125 QRTADLIKDMMPEQVREVFGIENDFTP 151
>Os11g0456300 Similar to Fimbriata-associated protein (Fragment)
Length = 173
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 91/153 (59%), Gaps = 8/153 (5%)
Query: 37 EMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTK 96
+M+TL SSDG FEV E SQT+ M +DD A NGIPLPNV +L+KV+EYC K
Sbjct: 8 KMITLKSSDGEEFEVEEPVAMESQTIR-HMIEDDC-ADNGIPLPNVNSKILSKVIEYCNK 65
Query: 97 HXXXXXXXXXXXXXKTSKEEEELM------MKSFDDEFILVDNHMLYSLLTAADAMRIQG 150
H + + +K++D +F+ VD L+ L+ AA+ + I+G
Sbjct: 66 HVHAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKG 125
Query: 151 LMDLACQRLADMIKGKTSEQMRQTLGITNDFTP 183
L+DL CQ +ADMIKGKT E++R+T I NDFTP
Sbjct: 126 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 158
>Os09g0272700
Length = 142
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 84/144 (58%), Gaps = 18/144 (12%)
Query: 36 GEMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCT 95
G+MV LISSD FEV EA RL D + NGIP+PNVA +V+AK YC
Sbjct: 6 GKMVELISSDEEHFEVEEAVARL----------DHHAGDNGIPIPNVADNVIAK--RYCM 53
Query: 96 KHXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLA 155
KH K E+E +K FD FI VDN L L++AA+ M ++GL+DLA
Sbjct: 54 KHATLSSGTGDM---KAMHEDE---LKKFDRVFIKVDNDTLRRLISAANVMGVKGLIDLA 107
Query: 156 CQRLADMIKGKTSEQMRQTLGITN 179
CQR+ADM+K K ++MRQT GI N
Sbjct: 108 CQRVADMLKAKRLKKMRQTSGINN 131
>Os08g0375500
Length = 169
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 38 MVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH 97
M+ LISSDG RFE+ EAA S+T L M +DD NG+PLPNV VL KVVEY KH
Sbjct: 11 MILLISSDGERFELSEAAASQSKT-LSHMIEDDCTD-NGVPLPNVTAVVLVKVVEYFKKH 68
Query: 98 XXXXXX-XXXXXXXKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLAC 156
+K EEEL KSFD EF+ VD ML+ L+ AA+ + Q L+DL C
Sbjct: 69 AAVTPKPATEAVVADKAKREEEL--KSFDAEFVDVDRTMLFELILAANFLNAQDLLDLTC 126
Query: 157 QRLADMIKGKTSEQMRQTLGITNDFTP 183
Q AD+IK + E++R+ ITNDFTP
Sbjct: 127 QHAADLIKDMSVEEVREVFNITNDFTP 153
>Os07g0409500 SKP1 component family protein
Length = 190
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 36 GEMVTLISSDGARFEVPEAAVRLSQTV---LDEMKKDDYNAINGIPLPN-VAGDVLAKVV 91
G+ ++ SDG F +P AA LS + D+ D+ + I LP+ ++ + KV
Sbjct: 14 GKTISFRCSDGQAFHMPVAAAMLSTAIRKMFDKYPSIDHGGV--IELPHQISSGIFPKVK 71
Query: 92 EYCTKHXXXXXXXXXXXXXKTSK---------EEEELMMKSFDDEFILVDNHMLYSLLTA 142
EYCTKH T ++EE +K++D EF+ ++ L+ LL
Sbjct: 72 EYCTKHAKVDDKGNPTVSTNTGAAAAASSSSTDDEEEDLKNWDKEFVNMEVKPLHDLLLV 131
Query: 143 ADAMRIQGLMDLACQRLADMIKGKTSEQMRQTLGITNDFT 182
A + I+GL + C+++ADM+KGKTSE+MRQ L I NDFT
Sbjct: 132 AHLLDIKGLFHITCRKVADMLKGKTSEEMRQILNIRNDFT 171
>Os09g0275200 Similar to Fimbriata-associated protein (Fragment)
Length = 160
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 17/146 (11%)
Query: 39 VTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHX 98
+ L+S DG RFEV A L +T L M K Y I PLPNVA +LA+VV+Y +H
Sbjct: 16 IDLVSKDGERFEVARDAALLCKT-LRWMIKGGYGRI---PLPNVASPILARVVDYLARHA 71
Query: 99 XXXXXXXXXXXXKTSKEEEELMMKSFDDEFIL-VDNHMLYSLLTAADAMRIQGLMDLACQ 157
++ + FD +F+ VD L+ LL AA+ ++ GL+DLAC+
Sbjct: 72 AAAAAM------------DDDGLDRFDRDFLAGVDQDTLFDLLLAANYLQADGLLDLACK 119
Query: 158 RLADMIKGKTSEQMRQTLGITNDFTP 183
++A M+ GK+ EQMR+ I ND TP
Sbjct: 120 KVAAMMTGKSPEQMREIFHIVNDLTP 145
>Os07g0625500 Similar to Fimbriata-associated protein (Fragment)
Length = 174
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
Query: 38 MVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAIN-GIPLPNVAGDVLAKVVEYCTK 96
M+TL S++G F V EA+ R S T+ + DD ++ G PLPNV LA+V++YC +
Sbjct: 24 MITLTSNEGKAFVVTEASARQSATIRSMV--DDGGCVDKGFPLPNVDSKTLARVIQYCDE 81
Query: 97 HXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFIL---VDNHMLYSLLTAADAMRIQGLMD 153
H +E + FD +FI D LY + AA+ + IQGL+
Sbjct: 82 HGNKEPHTV----------DERAALAKFDRDFIAELDADKAFLYDVTMAANYLHIQGLLA 131
Query: 154 LACQRLADMIKGKTSEQMRQTLGITNDFT 182
L Q +AD IKGKT E++R GI D T
Sbjct: 132 LTTQCVADTIKGKTPEEIRTAFGIEYDLT 160
>Os07g0624900
Length = 200
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 17/147 (11%)
Query: 39 VTLISSDGARFEVPEAAVRLSQTVLDEM--KKDDYNAINGIPLPNVAGDVLAKVVEYCTK 96
+ L S DG + +V EA+ RLS+T+ + A IP P++ D L V++YC K
Sbjct: 51 IHLKSKDGKQHDVTEASARLSKTIAGMILAGGGGGGADQCIPTPDIDHDTLRVVMQYCDK 110
Query: 97 HXXXXXXXXXXXXXKTSKEEEELMMKSFDDEFI-LVDNHMLYSLLTAADAMRIQGLMDLA 155
H + + +E +K +D++F+ +D L+ ++ AA+ + I GL+DL
Sbjct: 111 H--------------AADDADEEDLKEWDEDFVDELDQDALFDVIAAANYLDIDGLLDLT 156
Query: 156 CQRLADMIKGKTSEQMRQTLGITNDFT 182
C+R+AD IKGKT E++R+ I ND +
Sbjct: 157 CKRVADTIKGKTPEEIRKEFNIVNDLS 183
>Os07g0625000
Length = 724
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 45 DGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHXXXXXXX 104
DG EV EA+ R+S+ + D++ D IPLP+V L KV+EYC +H
Sbjct: 115 DGEPVEVTEASARISKVIGDKI--DAGRGGEAIPLPHVDKKTLKKVIEYCDEHANENS-- 170
Query: 105 XXXXXXKTSKEEEELMM--KSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQRLADM 162
T +++EEL K+F DE D L+ +L A+ ++I GL+DL QR+AD
Sbjct: 171 ------DTDEQKEELKNWDKAFIDELDEDDGSFLFLVLLASSYLKIDGLLDLTYQRVADN 224
Query: 163 IKGKTSEQMRQTL 175
K KT+E++R+T
Sbjct: 225 SKAKTTEEIRKTF 237
>Os07g0625200
Length = 221
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 38 MVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH 97
M+TL SSDG +V EA+ RLS+T+ + + DD IPLP+V+ L KVVEYC KH
Sbjct: 100 MITLESSDGEVVKVKEASARLSKTIGNII--DDGRGDEAIPLPDVSYKTLKKVVEYCDKH 157
Query: 98 XXXXXXXXXXXXXKTSKEEEELMMKSFDDEFI---LVDNHMLYSLLTAADAMRIQGLMDL 154
K+ +E++ +K++D FI D+ L ++ A++ ++I GL +L
Sbjct: 158 ----------ADEKSDTDEQKEELKNWDKAFIDELAEDDDSLVKVIMASNYLKIDGLHNL 207
Query: 155 ACQ 157
A Q
Sbjct: 208 ASQ 210
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,563,327
Number of extensions: 138062
Number of successful extensions: 346
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 318
Number of HSP's successfully gapped: 19
Length of query: 198
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 102
Effective length of database: 12,023,257
Effective search space: 1226372214
Effective search space used: 1226372214
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)