BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0130800 Os09g0130800|AK066693
(981 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0130800 DEAD/DEAH box helicase, N-terminal domain cont... 1959 0.0
Os02g0704300 Conserved hypothetical protein 540 e-153
Os03g0586900 Putative DNA helicase family protein 361 1e-99
Os07g0495900 Similar to Regulator of nonsense transcripts 1... 226 9e-59
Os04g0588200 Conserved hypothetical protein 142 2e-33
Os06g0310200 Conserved hypothetical protein 141 2e-33
Os04g0424200 Conserved hypothetical protein 139 1e-32
Os03g0440200 Conserved hypothetical protein 137 3e-32
Os03g0160400 Similar to ACL098Cp 129 1e-29
AK110123 120 3e-27
Os04g0582000 Conserved hypothetical protein 115 1e-25
Os04g0599600 111 3e-24
Os10g0537600 Conserved hypothetical protein 105 2e-22
Os02g0684150 101 3e-21
Os03g0387000 Conserved hypothetical protein 84 7e-16
>Os09g0130800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 981
Score = 1959 bits (5075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 950/981 (96%), Positives = 950/981 (96%)
Query: 1 MAIKLTKYQFFSSRATALHLRRRELKLLXXXXXXXXXXXXXNTCSQQSHLLLVSSAGPRE 60
MAIKLTKYQFFSSRATALHLRRRELKLL NTCSQQSHLLLVSSAGPRE
Sbjct: 1 MAIKLTKYQFFSSRATALHLRRRELKLLPFPSFPCSSSSAPNTCSQQSHLLLVSSAGPRE 60
Query: 61 QTLLPADSRSSLPHGITDNXXXXXXXXXXXXXXXXXXAKDEGECVPSAEEVSIRVNTLYE 120
QTLLPADSRSSLPHGITDN AKDEGECVPSAEEVSIRVNTLYE
Sbjct: 61 QTLLPADSRSSLPHGITDNGTRKEGRRRRRGRKRKETAKDEGECVPSAEEVSIRVNTLYE 120
Query: 121 SGDPIGKKELGRCVVQWLKQGMHSMAIKYASTEMQNDGATFLLDGGSSEDNLGFVMLAQP 180
SGDPIGKKELGRCVVQWLKQGMHSMAIKYASTEMQNDGATFLLDGGSSEDNLGFVMLAQP
Sbjct: 121 SGDPIGKKELGRCVVQWLKQGMHSMAIKYASTEMQNDGATFLLDGGSSEDNLGFVMLAQP 180
Query: 181 YLSAIPMPKGQEALCLKASTHYPTLFDHFQRELRDVLLKQQNQGLISDWRTTQSWMLLKE 240
YLSAIPMPKGQEALCLKASTHYPTLFDHFQRELRDVLLKQQNQGLISDWRTTQSWMLLKE
Sbjct: 181 YLSAIPMPKGQEALCLKASTHYPTLFDHFQRELRDVLLKQQNQGLISDWRTTQSWMLLKE 240
Query: 241 LANSAQHRAAARKPKAPTTHSTLGISLDKTRLMQTKIEDFVKKMSDLLHIERDAELEFTQ 300
LANSAQHRAAARKPKAPTTHSTLGISLDKTRLMQTKIEDFVKKMSDLLHIERDAELEFTQ
Sbjct: 241 LANSAQHRAAARKPKAPTTHSTLGISLDKTRLMQTKIEDFVKKMSDLLHIERDAELEFTQ 300
Query: 301 EELNATPVMDGNSKKPLKPVEYLVTHGQSQQEQCDTICNLNVISSSTGLDGQHLVLFRVK 360
EELNATPVMDGNSKKPLKPVEYLVTHGQSQQEQCDTICNLNVISSSTGLDGQHLVLFRVK
Sbjct: 301 EELNATPVMDGNSKKPLKPVEYLVTHGQSQQEQCDTICNLNVISSSTGLDGQHLVLFRVK 360
Query: 361 DNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFS 420
DNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFS
Sbjct: 361 DNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFS 420
Query: 421 KLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMME 480
KLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMME
Sbjct: 421 KLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMME 480
Query: 481 QNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSY 540
QNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSY
Sbjct: 481 QNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSY 540
Query: 541 LIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNR 600
LIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNR
Sbjct: 541 LIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNR 600
Query: 601 RLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNAD 660
RLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNAD
Sbjct: 601 RLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNAD 660
Query: 661 VVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVL 720
VVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVL
Sbjct: 661 VVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVL 720
Query: 721 SREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVAS 780
SREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVAS
Sbjct: 721 SREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVAS 780
Query: 781 HLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHV 840
HLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHV
Sbjct: 781 HLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHV 840
Query: 841 LNLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMV 900
LNLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMV
Sbjct: 841 LNLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMV 900
Query: 901 RSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHVE 960
RSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHVE
Sbjct: 901 RSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHVE 960
Query: 961 PGSFGGDSGLGYTPPALPSIS 981
PGSFGGDSGLGYTPPALPSIS
Sbjct: 961 PGSFGGDSGLGYTPPALPSIS 981
>Os02g0704300 Conserved hypothetical protein
Length = 331
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/331 (78%), Positives = 289/331 (87%)
Query: 651 IIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG 710
+IRE LS A VVLSTN GAADPL+RR CFDLVIIDEAGQAIEPSCWIPILQGKRCILAG
Sbjct: 1 MIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG 60
Query: 711 DQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDG 770
D QLAPV+LSR+A+ GGL SLLERASSLHN LLTT+LT Q+RM+DSIASWAS EMY G
Sbjct: 61 DHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHG 120
Query: 771 FLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNN 830
LKSS SVAS LAD P +K TWITRC LLLDTRMPYG+L+ C E +D +GTGSFYN+
Sbjct: 121 LLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYND 180
Query: 831 GEADVVSQHVLNLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGR 890
GEAD+V+QHVLNLV CGVSPTAIAVQSPYIAQVQLLR+RLE+YP SGVEVSTIDSFQGR
Sbjct: 181 GEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGR 240
Query: 891 EADAVVISMVRSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHI 950
EADAVVISMVRSN LGAVGFLGD+RRMNVAITRA RHV +VCD+STIC++ FLARLLRHI
Sbjct: 241 EADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHI 300
Query: 951 RQHGQVRHVEPGSFGGDSGLGYTPPALPSIS 981
R++GQV+HV PGS G SGLG++ P LPSIS
Sbjct: 301 RRYGQVKHVVPGSLDGVSGLGFSQPTLPSIS 331
>Os03g0586900 Putative DNA helicase family protein
Length = 651
Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 239/686 (34%), Positives = 361/686 (52%), Gaps = 74/686 (10%)
Query: 277 IEDFVKKMSDLLHIERDAELEFTQEELNATPVMDGNSKKPLKPVEYLVTHGQSQQEQCDT 336
+++FV M+ L+ +E+ AE+ T ++ + +
Sbjct: 24 LQEFVSSMAPLIDLEKAAEISAES-----------------------ATSSKTLERRGCV 60
Query: 337 ICNLNVISSSTGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEITTSCM-QGF 395
+ NL + TGL G+ L+ F+ LPP D+V ++ N+ + ++ + QG
Sbjct: 61 MANLKCTDAQTGLMGKTLLEFQPNKGDVLPPHKFGTHDVVALKP--NKADAGSAALGQGV 118
Query: 396 IYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLLQRKG 455
+Y L + SITV D S L R++ LA+ +TY R +AL+ L KG
Sbjct: 119 VYRLKD--SSITVAFDDIPEDGLNSPL--------RLEKLANEVTYRRMKDALVQLS-KG 167
Query: 456 LQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITL 515
+Q S ++ LFG+ M + + + + + D SQ AI+
Sbjct: 168 IQT-GPSANLIPVLFGENPPMSSKDVAKFSPFNK--------------NLDESQKDAISK 212
Query: 516 GLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLD 575
L + R V ++ GPPGTGKT + +I V++G ++L A SN AVDN+VE+LS
Sbjct: 213 ALRS-RDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIAVDNIVERLSRYRTK 271
Query: 576 TVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHC------IQDDTL 629
VR+G+PAR+ P V +L V R + D+RK++K +D
Sbjct: 272 LVRLGHPARLLPQVLDSALDAQVLR------ADNSSLAGDIRKEMKVLNSKLLKAKDKNT 325
Query: 630 AAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAG 689
IR+ L+ L K +K+++ + +V+ NADVVLST GA+ + I FDLVIIDEA
Sbjct: 326 KRDIRKELRTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGI-TFDLVIIDEAA 384
Query: 690 QAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKL 749
QA+E +CWI +L+G RC+LAGD QL P + S EA + G+ +L ER + + + +T+ L
Sbjct: 385 QALEMACWIALLKGPRCVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLTEAYGDQITSML 444
Query: 750 TTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYG 809
T QYRMH+ I +W+S E+Y+ +K+ SVA H+L D +K + T +L+DT
Sbjct: 445 TIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPTIILIDT----- 499
Query: 810 SLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQSPYIAQVQLLRDR 869
D EE D S N GEA V H LV+ GV + I + +PY AQV L+
Sbjct: 500 -TGCDMEEVKDE--EESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQVTCLKMM 556
Query: 870 LEDYPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRMNVAITRARRHVA 929
+ +E+ST+D FQGRE +A++ISMVRSN+ VGFL D+RRMNVA+TRARR
Sbjct: 557 RNKDTKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCC 616
Query: 930 LVCDSSTICNNAFLARLLRHIRQHGQ 955
LVCD T+ N+ FL RL+ + ++G+
Sbjct: 617 LVCDVETVSNDKFLKRLVEYFEENGE 642
>Os07g0495900 Similar to Regulator of nonsense transcripts 1 homolog
Length = 1013
Score = 226 bits (575), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 242/462 (52%), Gaps = 46/462 (9%)
Query: 504 DFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGE-RVLVTAPSNAAV 562
+ +ASQ+ A+ L ++P+ +IQGPPGTGKT + ++ ++G+ +VLV APSN AV
Sbjct: 248 ELNASQVLAVKSVL--QKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 305
Query: 563 DNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDL-RKDLK 621
D + EK+S TGL VR+ +R E V+ ++ T ++ + D K
Sbjct: 306 DQLAEKISSTGLKVVRLCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSEL 354
Query: 622 HCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFD 681
H +Q G +L K +K ++ RE+L +ADV+ T +GA DP + F
Sbjct: 355 HKLQQLKDEQG--ELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANF-RFR 411
Query: 682 LVIIDEAGQAIEPSCWIPILQG-KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSL 740
V+IDE+ QA EP C IP++ G K+ +L GD QL PV++ ++A + GLA SL ER L
Sbjct: 412 QVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 471
Query: 741 HNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFL 800
+ +L QYRMH ++ + SN Y+G L++ +V P I W +
Sbjct: 472 --GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNER---QTPGIDFPWPVPNRPM 526
Query: 801 LLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQSPYI 860
+M +E + +GT S+ N EA V + V ++ GV P+ I V +PY
Sbjct: 527 FFYVQM--------GQEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 577
Query: 861 AQVQLLRDRLEDYPEASG---------VEVSTIDSFQGREADAVVISMVRSNTLGAVGFL 911
Q R + +Y +G +EV+++DSFQGRE D +++S VRSN +GFL
Sbjct: 578 GQ----RAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 633
Query: 912 GDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQH 953
D RR+NVA+TRAR + ++ + + LL H ++H
Sbjct: 634 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEH 675
>Os04g0588200 Conserved hypothetical protein
Length = 1287
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 198/450 (44%), Gaps = 93/450 (20%)
Query: 525 IIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPAR 584
+I G PGTGKT + + + + +GE +L+T+ +N+A+DN++ KL G+D +R+G
Sbjct: 887 LILGMPGTGKTYTMVHAVKSLLMRGESILLTSYTNSAIDNLLMKLKAEGVDFLRIGRHEA 946
Query: 585 ISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNF 644
+ P V HC+ +
Sbjct: 947 VHPDVKG------------------------------HCLSTTDI--------------- 961
Query: 645 KKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGK 704
+ + ++ + VV T +G PL+ FD I+DEAGQ P P++
Sbjct: 962 --QSVDAVKARMEQVQVVGVTCLGIYHPLLAHKK-FDTCIMDEAGQITLPVSLGPLMLAT 1018
Query: 705 RCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWAS 764
+ +L GD QL P+V S EA + G+ +SL R S H + ++ L QYRM I ++
Sbjct: 1019 KFVLVGDHYQLPPLVQSSEARENGMGVSLFWRLSEAHPQAISA-LRCQYRMSSGIMELSN 1077
Query: 765 NEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGT 824
+ +Y L S S +A+ A L L R P + + +E L+P
Sbjct: 1078 SLIYGNRL----SCGSLEIAN------------AKLKLSGRGP---VRLKLKEILNPDRA 1118
Query: 825 GSFYNNG-----------------EADVVSQHVLNLVQCGVSPTAIAVQSPYIAQVQLLR 867
F N EA +VS L++ GV+ + + +PY AQ L++
Sbjct: 1119 VVFANTDEVPAFEAKEHRTVNNPTEALIVSWITNELLKRGVAQDGVGIITPYNAQANLIQ 1178
Query: 868 DRLEDYPEASGVEVSTIDSFQGREADAVVISMVRSN---TLGAVGFLGDNRRMNVAITRA 924
++ + VEV TID +QGR+ + +++S VRSN LGD R+NV +TRA
Sbjct: 1179 QHVD-----ASVEVHTIDKYQGRDKECIIVSFVRSNGNTRASGSSLLGDWHRINVVLTRA 1233
Query: 925 RRHVALVCDSSTICNNAFLARLLRHIRQHG 954
++ + +V ++T+ L ++ + + G
Sbjct: 1234 KKKLIMVGSAATLSTIPLLRLMIEKVAERG 1263
>Os06g0310200 Conserved hypothetical protein
Length = 1029
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 210/462 (45%), Gaps = 81/462 (17%)
Query: 515 LGLNNKRPVLIIQGPPGTGKTG--LLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDT 572
+G+N + ++ + G G TG L +++ + VLV APSN+A+D +V ++ T
Sbjct: 373 IGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQT 432
Query: 573 GLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLK--HCIQDDTLA 630
G +R N +P + +R LK H ++ ++
Sbjct: 433 G---IRDENNNTYNPKI--------------------------VRIGLKAHHSVKAVSMD 463
Query: 631 AGIRQLLKQL------GKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIG-CFDLV 683
I+Q L + G+ + I +L A +V ST + + R+ FD+V
Sbjct: 464 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 523
Query: 684 IIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNE 743
IIDEA QA+ GD QL V+S A + G SL +R +
Sbjct: 524 IIDEAAQAV-----------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFP 566
Query: 744 LLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLD 803
+ K+ QYRMH I+ + S E Y+G L+ ++ K W + F
Sbjct: 567 VQMLKI--QYRMHPEISIFPSKEFYEGVLEDGEGLSK---------KRPWHSYSCF---- 611
Query: 804 TRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVS--QHVLNLVQCGV-SPTAIAVQSPYI 860
P+ ++D E P+G+GS+ N E + ++ H + + + S + +AV SPY
Sbjct: 612 --GPFCFFDVDGTES-QPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYR 668
Query: 861 AQVQLLRDRLED-YPEASG--VEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRM 917
QV+LL+D + + S ++V+T+D FQGRE + V+ S VR N +GF+ D RRM
Sbjct: 669 HQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRM 728
Query: 918 NVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHV 959
NVAITRAR V +V +ST+ + L+ ++ G+ V
Sbjct: 729 NVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQV 770
>Os04g0424200 Conserved hypothetical protein
Length = 836
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 208/463 (44%), Gaps = 83/463 (17%)
Query: 515 LGLNNKRPVLIIQGPPGTGKTG--LLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDT 572
+G+N + ++ + G G TG L +++ + VLV APSN+A+D +V ++
Sbjct: 343 IGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQI 402
Query: 573 GLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLK--HCIQDDTLA 630
G +R N +P + +R LK H ++ ++
Sbjct: 403 G---IRDENNNTYNPKI--------------------------VRIGLKAHHSVKAVSMD 433
Query: 631 AGIRQLLKQL------GKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIG-CFDLV 683
I+Q L + G+ + I +L A +V ST + + R+ FD+V
Sbjct: 434 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 493
Query: 684 IIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNE 743
IIDEA QA+ GD QL V+S A + G SL +R +
Sbjct: 494 IIDEAAQAV-----------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFP 536
Query: 744 LLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLD 803
+ K+ QYRMH I+ + S E Y+G L+ ++ K W + F
Sbjct: 537 VQMLKI--QYRMHPEISIFPSKEFYEGVLEDGEGLSK---------KRPWHSYSCF---- 581
Query: 804 TRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVS----QHVLNLVQCGVSPTAIAVQSPY 859
P+ ++D E P+G+GS+ N E + ++ Q + + S + +AV SPY
Sbjct: 582 --GPFCFFDVDGTES-QPSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPY 637
Query: 860 IAQVQLLRDRLED-YPEASG--VEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRR 916
QV+LL+D + + S ++V+T+D FQGRE + V+ S VR N +GF+ D RR
Sbjct: 638 RHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRR 697
Query: 917 MNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHV 959
MNVAITRAR V +V +ST+ + L+ ++ G+ V
Sbjct: 698 MNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQV 740
>Os03g0440200 Conserved hypothetical protein
Length = 824
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 209/462 (45%), Gaps = 81/462 (17%)
Query: 515 LGLNNKRPVLIIQGPPGTGKTG--LLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDT 572
+G+N + ++ + G G TG L +++ + VLV APSN+A+D +V ++ T
Sbjct: 343 IGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQT 402
Query: 573 GLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLK--HCIQDDTLA 630
G +R N +P + +R LK H ++ ++
Sbjct: 403 G---IRDENNNTYNPKI--------------------------VRIGLKAHHSVKAVSMD 433
Query: 631 AGIRQLLKQL------GKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIG-CFDLV 683
I+Q L + G+ + I +L A +V ST + + R+ FD+V
Sbjct: 434 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 493
Query: 684 IIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNE 743
IIDEA QA+ GD QL V+S A + G SL +R +
Sbjct: 494 IIDEAAQAV-----------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFP 536
Query: 744 LLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLD 803
+ K+ QYRMH I+ + S E Y+G L+ ++ K W + F
Sbjct: 537 VQMLKI--QYRMHPEISIFPSKEFYEGVLEDGEGLSK---------KRPWHSYSCF---- 581
Query: 804 TRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVS--QHVLNLVQCGV-SPTAIAVQSPYI 860
P+ ++D E P+G+GS+ N E + ++ H + + + S + +AV SPY
Sbjct: 582 --GPFCFFDVDGTES-QPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYR 638
Query: 861 AQVQLLRDRLED-YPEASG--VEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRM 917
QV+LL+D + + S ++V+T+D FQG E + V+ S VR N +GF+ D RRM
Sbjct: 639 HQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRM 698
Query: 918 NVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHV 959
NVAITRAR V +V +ST+ + L+ ++ G+ V
Sbjct: 699 NVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQV 740
>Os03g0160400 Similar to ACL098Cp
Length = 959
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 205/466 (43%), Gaps = 78/466 (16%)
Query: 512 AITLGLNNKRPVLIIQGPPGTGKTGLL--SYLIACAVRKGERVLVTAPSNAAVDNMVEKL 569
A LG P +I GPPGTGKT L S L ++ VL+ A SN+A D+++ KL
Sbjct: 404 ATILGCRGVAP-YVIYGPPGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKL 462
Query: 570 SDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTL 629
L + P+ I RL + ++E D ++ C D +
Sbjct: 463 ----LQASYLIRPSDIF--------------RLNAASRQYEDVDPDF---IRFCFFQDMV 501
Query: 630 --AAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDE 687
++ LL+ +I+ ++ ++ S I R G F + +DE
Sbjct: 502 FKCPPLQALLRY----------KIVISTYMSSSMLQSEGI--------RRGHFTHIFLDE 543
Query: 688 AGQAIEPSCWIPI--LQGKR--CILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNE 743
AGQA EP +P+ L G+ +LAGD QL PVV ++A + GL S L+R + +
Sbjct: 544 AGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQ 603
Query: 744 LLT------TKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRC 797
T TKL YR H +I S Y G L + + D
Sbjct: 604 YSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYD------------ 651
Query: 798 AFLLLDTRMPYGSLNID-CEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCG-VSPTAIAV 855
+ L + P + I C+E S++N EA V + NL + G V I V
Sbjct: 652 SIDLPNKSFPVLFVGIQGCDER--EGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGV 709
Query: 856 QSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVRS-------NTLGAV 908
+PY QV ++ LE + E ++V +++ FQG+E + ++IS VRS + +
Sbjct: 710 ITPYRQQVVKIKKALETF-EMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNL 768
Query: 909 GFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHG 954
GFL ++RR NVAITRA+ + ++ + I + RLLR+ +G
Sbjct: 769 GFLSNHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNG 814
>AK110123
Length = 1098
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 46/337 (13%)
Query: 633 IRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAI 692
I++ L +L + I E+L+ ADV+ + I A P + I +V DEA A
Sbjct: 702 IKKRLNRLKATYFFLRASIRGEILNGADVICGSAIAAGSPELDMID-LPVVFFDEASMAT 760
Query: 693 EPSCWIPILQGKRCI-LAGDQRQLAPVVLSREAMQGGLAMSLLER----ASSLHNELLTT 747
EP +P+++G R + + GD +QL PVV S EA QGGL+ SL ER ++ +++ +T
Sbjct: 761 EPVSLVPLMKGCRHLSIIGDHKQLPPVVTSAEAKQGGLSKSLFERLIESTAADGSKIPST 820
Query: 748 KLTTQYRMHDSIASWASNEMYDGFLKSS------PSVASHLLADYPFIK-ETWITRCAFL 800
L Q+RMH +A + + Y G L++ P+V S +P ++ + R F+
Sbjct: 821 MLNVQFRMHPRLAEFPNKTFYSGALENGSGTDKIPAVESGY---WPQVEGKDEAHRLCFI 877
Query: 801 LLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTA--IAVQSP 858
R E D + S N EA + +++++ T I + +P
Sbjct: 878 DHKGR----------ESKAD--NSLSLCNVAEARLAVDVAMDVLRRNPDLTGDDIGIVTP 925
Query: 859 YIAQVQLLRDRLE-----DYPEASG-----------VEVSTIDSFQGREADAVVISMVRS 902
Y Q LL L + A+G ++V T+D F+GRE ++ S VR+
Sbjct: 926 YAGQQILLEKMLHNDTSAERRRAAGALGARSSQLGCIDVHTVDGFEGREKKVILFSTVRT 985
Query: 903 NTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTICN 939
N G VGFL D RR+NVA+TRA+ + ++ + T N
Sbjct: 986 NAQGYVGFLADGRRLNVALTRAQSALFVLGNIDTFKN 1022
>Os04g0582000 Conserved hypothetical protein
Length = 813
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 213/494 (43%), Gaps = 102/494 (20%)
Query: 498 LKKNKYDFDASQLKAIT----LGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVL 553
L KY + SQL A+ + P+ +I GPP R G R L
Sbjct: 306 LNLEKYMLNNSQLNAVADCVLVSEKISSPIKLIWGPP----------------RTGHRTL 349
Query: 554 VTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELV---NRRLQKFTEEFE 610
AP+N AV + R+ SP+ + + L ++V N++ K
Sbjct: 350 TCAPTNTAVLEVAS----------RIVKLVHESPASSGQYLSDIVLFGNKKRMKIGH--- 396
Query: 611 RKKSDLRK--DLKHCIQDDTL-AAGIRQ-------LLKQLGKNFK------------KKE 648
SD K DL + D + IR+ +L+ L N K ++
Sbjct: 397 -GDSDPLKWPDLLASVHTDVCNKSKIRKARLLCVRILRYLKINLKLPDWDRLSLSDDDRK 455
Query: 649 KEIIREVLSNADVVLST--------NIGAADPLVRRIGCF---DLVIIDEAGQAIEPSCW 697
+EI +L +L T N+ D R C +L+++DEA Q E
Sbjct: 456 REIRVYLLQRTKCILCTVSSSYVLHNVSMDD----RSECLKPLELLVVDEAAQLKECETL 511
Query: 698 IPI-LQG-KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSL-HNELLTTKLTTQYR 754
IP+ L G K+ + GD+ QL +V S+ + S+ ER SSL +N+ L L QYR
Sbjct: 512 IPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERLSSLGYNKHL---LNIQYR 568
Query: 755 MHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRM--PYGSLN 812
M I+ + YDG + P+V S +Y K +L +M PY +N
Sbjct: 569 MRPEISKFPVASFYDGKISDGPNVVSK---NY---KRN--------ILPGKMFGPYSFIN 614
Query: 813 IDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGV---SPTAIAVQSPYIAQVQLLRDR 869
+D S N E V V L + V S + V SPY AQV+ ++++
Sbjct: 615 VDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVRAIQEK 674
Query: 870 L---EDYPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRMNVAITRARR 926
+ D + V+V ++D FQG E D ++IS VRSN G+VGFL + +R N+A+TRA+
Sbjct: 675 IGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRAKH 734
Query: 927 HVALVCDSSTICNN 940
+ +V + +T+ N+
Sbjct: 735 CLWIVGNGTTLSNS 748
>Os04g0599600
Length = 923
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 656 LSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQG--KRCILAGDQR 713
+ NA ++ T+ + I D++I+DEA Q E IP+ K +L GD
Sbjct: 529 MRNATLIFCTSSSSYRLHHMEIAPLDVLIVDEAAQVRECELIIPLRLHWLKHVVLVGDDC 588
Query: 714 QLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLK 773
QL P+V S+ + G +SL ER L E L QYRM I+ + + + Y +
Sbjct: 589 QLRPMVKSQVCKEAGFGISLFERLVVLDFE--KHLLNIQYRMDPRISLFPNVQFYGRKIL 646
Query: 774 SSPSVASHLL-ADYPFIKETWITRCAFLLLDTRMPYGS---LNIDCEEHLDPAGTGSFYN 829
P+V S + DY T +P+G+ +NI + + GTG+ +
Sbjct: 647 DGPNVMSSVYNKDY-----------------TNLPFGTYAFINIS-DGREEKEGTGNSWR 688
Query: 830 NGEADVVSQHVLNLVQCGVSP-------TAIAVQSPYIAQVQLLRDRL---EDYPEASGV 879
N V VL+L+Q +I V SPY +QV + RL D + V
Sbjct: 689 NLVEVAV---VLHLIQTIFKTWKRKGQMLSIGVISPYSSQVDSIESRLGKLYDTCDGFHV 745
Query: 880 EVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTI 937
V ++D FQG E D +++S VRSN G VGFL D +R NVA+TRAR + ++ +++T+
Sbjct: 746 RVKSVDGFQGEEDDIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWILGNANTL 803
>Os10g0537600 Conserved hypothetical protein
Length = 985
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 27/284 (9%)
Query: 682 LVIIDEAGQAIEPSCWIPILQG--KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASS 739
+++IDEA Q E +P+L + +L GD+ QL+ +V S+ A SL ER +
Sbjct: 235 ILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCT 294
Query: 740 LHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADY--PFIKETWITRC 797
+ L QYRMH I + + YD + PSV DY ++
Sbjct: 295 M--GYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQE---DYMKSYLPGPIYGAY 349
Query: 798 AFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLV-QCGVSP--TAIA 854
+F+ ++ M E LD G S N E V + V L +C T++
Sbjct: 350 SFIHIENDM----------EMLDELGQSS-KNMVEVAVATNIVERLAKECSEKRQRTSLG 398
Query: 855 VQSPYIAQVQLLRDRLEDY---PEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFL 911
V SPY AQV L++RL E V V +ID FQG E D ++IS VRSN G VGFL
Sbjct: 399 VISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFL 458
Query: 912 GDNRRMNVAITRARRHVALVCDSST-ICNNAFLARLLRHIRQHG 954
D R+NVA+TRA+ + ++ + +T + +N+ A L+ ++ G
Sbjct: 459 SDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDSKRRG 502
>Os02g0684150
Length = 375
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 122/278 (43%), Gaps = 47/278 (16%)
Query: 680 FDLVIIDEAGQAIEPSCWIPI-LQGKR-CILAGDQRQLAPVVLSREAMQGGLAMSLLERA 737
FDL+++DEA Q E IP+ L G R +L G + QL +V SR SL ER
Sbjct: 113 FDLLVVDEAAQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERL 172
Query: 738 SSL-HNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITR 796
SSL H + L L QYRMH I+ + + Y+ + +V P + +
Sbjct: 173 SSLGHPKHL---LDVQYRMHPGISKFPVSSFYENKISDGENVLHRDYERKPLAGPMYGS- 228
Query: 797 CAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQ----------- 845
Y +N+D + S N E V++ V L +
Sbjct: 229 -----------YSFINVDAGKESKGKHDKSLMNPIEVAAVTRIVQRLFKGTHCIMPLHSG 277
Query: 846 ----------CGVS-----PTAIAVQSPYIAQVQLLRDRLEDYPEASG---VEVSTIDSF 887
C S + V SPY QV+ +++RL E G V+V ++D F
Sbjct: 278 MASLSSDSLVCAESVDTGRKLCVGVVSPYKGQVRAIQERLGKAYETHGGFTVKVRSVDGF 337
Query: 888 QGREADAVVISMVRSNTLGAVGFLGDNRRMNVAITRAR 925
QG E D ++ S VRSNT G+VGFL + R NVA+TRA+
Sbjct: 338 QGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRAK 375
>Os03g0387000 Conserved hypothetical protein
Length = 600
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 42/275 (15%)
Query: 680 FDLVIIDEAGQAIEPSCWIPIL---------QGKRCILAGDQRQLAPVVLSREAMQGGLA 730
+D ++++E+ Q +E +IP+L + KRCIL GD QL PVV + A Q
Sbjct: 153 YDNLLMEESAQILEIETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNM-AFQKYSH 211
Query: 731 M--SLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPF 788
M SL R L + +L Q R SIA E+Y+ + L D P+
Sbjct: 212 MDQSLFTRFVRLG--VPYIELNAQGRARPSIA-----ELYNWRYRE--------LGDLPY 256
Query: 789 IKETWITRCAFLLLDTRMPYGSLNIDCEEHL---DPAGTGSFYNN-GEADVVSQHVLNLV 844
++E I F ++ Y +D + + A + FY N GEA+ + + +
Sbjct: 257 VREEAI----FHKANSGFSYDYQLVDVPDFRGRGESAPSPWFYQNEGEAEFIVSVYIYMR 312
Query: 845 QCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVE----VSTIDSFQGREADAVVISMV 900
G I++ + Y Q L+RD + + +E V+T+D FQG++ D +++S+V
Sbjct: 313 LIGYPANKISILTTYNGQKLLIRDVINRRCKPWNIEPPSKVTTVDKFQGQQNDFILLSLV 372
Query: 901 RSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSS 935
R+ VG L D RR+ VA++RAR + + C S
Sbjct: 373 RTRF---VGHLRDVRRLIVAMSRARLGLYVFCRRS 404
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,229,574
Number of extensions: 1323217
Number of successful extensions: 3829
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 3795
Number of HSP's successfully gapped: 15
Length of query: 981
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 871
Effective length of database: 11,292,261
Effective search space: 9835559331
Effective search space used: 9835559331
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)