Os04g0582000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0582000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.66 | 0.398 | 2.84 | -0.108 | 0.0864 | 0.289 | 0.0894 | 0.36 | 0.116 | 0.171 | 2.223 | 441 | -- | -- |
| 71.8 | 0.395 | 2.85 | -0.114 | 0.0912 | 0.324 | 0.0584 | -- | 0.117 | 24 | 2.3 | 446 | -- | -- |
| 71.69 | 0.394 | 2.85 | -0.111 | 0.0872 | 0.282 | -- | 0.347 | 0.114 | 0.232 | 2.3 | 440 | -- | -- |
| 71.82 | 0.395 | 2.85 | -0.121 | 0.0924 | 0.329 | -- | -- | 0.116 | 23.8 | 2.263 | 446 | -- | -- |
| 72.15 | 0.396 | 2.84 | -0.106 | -- | 0.264 | -- | 0.391 | 0.115 | -- | 2.3 | 440 | -- | -- |
| 73.21 | 0.401 | 2.86 | -0.0407 | 0.128 | -- | 0.156 | -- | 0.0805 | 4.01 | -- | -- | -- | -- |
| 73.28 | 0.401 | 2.86 | -0.0426 | 0.129 | -- | -- | -- | 0.0796 | 4.05 | -- | -- | -- | -- |
| 72.32 | 0.396 | 2.85 | -0.11 | -- | 0.306 | -- | -- | 0.117 | -- | 2.2 | 440 | -- | -- |
| 72.16 | 0.396 | 2.85 | -- | 0.0869 | 0.283 | -- | -- | 0.127 | 0.473 | 2.216 | 446 | -- | -- |
| 74.19 | 0.402 | 2.86 | -0.0374 | -- | -- | -- | -- | 0.083 | -- | -- | -- | -- | -- |
| 73.33 | 0.401 | 2.85 | -- | 0.128 | -- | -- | -- | 0.0843 | 4.06 | -- | -- | -- | -- |
| 72.61 | 0.397 | 2.85 | -- | -- | 0.264 | -- | -- | 0.12 | -- | 2.217 | 377 | -- | -- |
| 74.23 | 0.402 | 2.86 | -- | -- | -- | -- | -- | 0.0872 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.85 | wind | 1 | 720 | < th | dose dependent | rect. | 16 | 2 |
| 4 | 68.89 | wind | 1 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 6 | 68.91 | wind | 9 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 38 | 68.91 | wind | 9 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 70 | 68.92 | wind | 1 | 270 | < th | dose independent | rect. | 19 | 1 |
| 72 | 68.92 | wind | 1 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 74 | 68.93 | wind | 1 | 720 | < th | dose independent | rect. | 17 | 1 |
| 78 | 69.00 | wind | 1 | 720 | < th | dose independent | rect. | 16 | 4 |
| 99 | 69.46 | wind | 1 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 100 | 69.46 | humidity | 90 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 109 | 69.71 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 111 | 69.75 | wind | 1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 116 | 69.80 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 20 | 1 |
| 119 | 69.84 | humidity | 70 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 121 | 69.85 | wind | 1 | 720 | > th | dose independent | rect. | 15 | 8 |
| 125 | 69.90 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 190 | 69.99 | wind | 1 | 720 | < th | dose dependent | rect. | 14 | 7 |
| 191 | 70.00 | humidity | 70 | 270 | < th | dose independent | rect. | 8 | 1 |
| 210 | 70.01 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 1 |
| 231 | 70.04 | humidity | 80 | 1440 | < th | dose dependent | rect. | 22 | 11 |
| 233 | 70.06 | humidity | 70 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 271 | 70.12 | humidity | 60 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 273 | 70.12 | humidity | 70 | 30 | < th | dose independent | rect. | 8 | 2 |
| 322 | 70.15 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 325 | 70.15 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 326 | 70.16 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 353 | 70.16 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 354 | 70.16 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 17 |
| 356 | 70.16 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 630 | 70.18 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 657 | 70.20 | wind | 1 | 10 | > th | dose independent | rect. | 23 | 23 |
| 767 | 70.27 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 829 | 70.31 | radiation | 30 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 836 | 70.34 | wind | 1 | 10 | > th | dose independent | sin | 22 | NA |
| 838 | 70.34 | humidity | 80 | 30 | > th | dose independent | rect. | 21 | 2 |
| 839 | 70.34 | radiation | 1 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 853 | 70.35 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 857 | 70.37 | wind | 1 | 10 | > th | dose dependent | rect. | 22 | 1 |
| 880 | 70.38 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 911 | 70.42 | wind | 1 | 720 | < th | dose independent | rect. | 14 | 6 |
| 913 | 70.43 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 983 | 70.47 | wind | 1 | 10 | > th | dose independent | rect. | 23 | 7 |
| 984 | 70.47 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 991 | 70.48 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |