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Os03g0387000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0143) R2 : 0.737
β1 : 1.31 (0.0525) R2dD : 0.376 R2D : 0.278
β2 : 0.937 (0.0369) R2dC : 0.373 R2C : 0.324
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.352 (0.0306) R2dN8 : 0.102 R2N8 : 0.00367
σ : 0.27
deviance : 33.12
__
_____
C
peak time of C : 16.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.99 0.253 11.5 1.41 0.894 0.52 0.26 -1.07 0.4 16.8 80.32 1291 -- --
30.07 0.255 11.5 1.32 0.897 0.475 0.162 -- 0.38 16.7 80.36 1324 -- --
29.16 0.251 11.5 1.41 0.896 0.522 -- -1.02 0.4 16.7 80.54 1296 -- --
30.13 0.256 11.5 1.32 0.904 0.483 -- -- 0.381 16.7 80.82 1357 -- --
62.12 0.369 11.5 1.27 -- -0.393 -- -0.128 0.33 -- 80.54 1296 -- --
33.02 0.269 11.5 1.31 0.936 -- 0.2 -- 0.351 16.6 -- -- -- --
33.12 0.27 11.5 1.31 0.937 -- -- -- 0.352 16.6 -- -- -- --
62.23 0.369 11.5 1.27 -- -0.393 -- -- 0.33 -- 80.54 1296 -- --
74.38 0.402 11.5 -- 0.885 0.516 -- -- 0.317 16.8 84.06 2749 -- --
79.87 0.418 11.5 1.28 -- -- -- -- 0.327 -- -- -- -- --
78.65 0.415 11.6 -- 0.913 -- -- -- 0.206 16.7 -- -- -- --
104.61 0.478 11.5 -- -- -0.401 -- -- 0.189 -- 80.54 1296 -- --
122.97 0.518 11.5 -- -- -- -- -- 0.186 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.12 wind 5.0 270 < th dose independent rect. 3 2
2 26.32 precipitation 0.1 270 < th dose independent rect. 3 2
3 26.32 precipitation 0.1 270 < th dose dependent rect. 3 2
4 26.43 wind 9.0 270 < th dose independent rect. 5 22
6 26.59 wind 5.0 90 < th dose independent rect. 3 5
7 26.63 wind 9.0 270 < th dose dependent rect. 3 2
9 26.65 temperature 10.0 270 > th dose independent rect. 3 2
11 26.65 temperature 30.0 270 < th dose independent rect. 3 2
12 26.65 humidity 50.0 270 > th dose independent rect. 3 2
15 26.65 atmosphere 995.0 270 > th dose independent rect. 3 2
16 26.65 atmosphere 1010.0 270 < th dose independent rect. 3 2
18 26.65 radiation 20.0 270 < th dose independent rect. 3 2
21 26.65 temperature 10.0 270 > th dose independent rect. 5 22
22 26.66 radiation 20.0 270 < th dose dependent rect. 3 2
25 26.68 radiation 1.0 270 < th dose independent rect. 3 2
27 26.68 radiation 1.0 270 < th dose dependent rect. 3 2
31 26.75 precipitation 0.1 90 < th dose independent rect. 3 5
32 26.75 precipitation 0.1 90 < th dose dependent rect. 3 5
34 26.85 atmosphere 1005.0 30 > th dose independent rect. 4 4
36 26.88 atmosphere 1005.0 270 > th dose independent rect. 3 2
37 26.91 wind 9.0 90 < th dose independent rect. 8 19
38 26.92 wind 9.0 90 < th dose dependent rect. 3 5
45 26.98 temperature 10.0 90 > th dose independent rect. 3 5
47 26.98 temperature 30.0 90 < th dose independent rect. 3 5
48 26.98 humidity 50.0 90 > th dose independent rect. 3 5
50 26.98 atmosphere 995.0 90 > th dose independent rect. 3 5
51 26.98 atmosphere 1015.0 90 < th dose independent rect. 3 5
52 26.98 temperature 10.0 90 > th dose independent rect. 8 19
53 26.99 temperature 10.0 270 > th dose dependent rect. 3 2
54 27.00 radiation 40.0 90 < th dose independent rect. 3 5
56 27.02 precipitation 0.1 10 < th dose independent rect. 4 4
57 27.02 precipitation 0.1 10 < th dose dependent rect. 4 4
58 27.03 wind 9.0 10 < th dose independent rect. 8 20
62 27.06 precipitation 0.1 90 < th dose independent rect. 8 19
65 27.06 precipitation 0.1 90 < th dose dependent rect. 8 19
72 27.09 temperature 10.0 10 > th dose independent rect. 4 4
76 27.09 temperature 30.0 10 < th dose independent rect. 4 4
78 27.09 humidity 50.0 10 > th dose independent rect. 4 4
82 27.09 atmosphere 995.0 10 > th dose independent rect. 4 4
84 27.09 atmosphere 1015.0 10 < th dose independent rect. 4 4
87 27.09 temperature 10.0 10 > th dose independent rect. 8 20
91 27.10 wind 9.0 10 < th dose dependent rect. 4 4
92 27.12 atmosphere 1000.0 10 > th dose dependent rect. 4 4
94 27.14 wind 1.0 270 > th dose independent rect. 3 1
100 27.17 wind 9.0 270 < th dose independent rect. 6 20
106 27.19 radiation 20.0 270 < th dose dependent rect. 1 9
113 27.24 atmosphere 1000.0 270 > th dose dependent rect. 3 2
116 27.25 precipitation 0.1 270 < th dose independent rect. 5 22
118 27.25 precipitation 0.1 270 < th dose dependent rect. 5 22
128 27.28 temperature 10.0 10 > th dose dependent rect. 4 4
131 27.28 humidity 50.0 720 > th dose dependent rect. 21 6
135 27.30 humidity 50.0 270 > th dose dependent rect. 3 2
143 27.32 radiation 10.0 270 < th dose dependent rect. 2 5
157 27.33 temperature 10.0 270 > th dose independent rect. 6 20
162 27.35 radiation 40.0 270 < th dose dependent rect. 2 4
163 27.36 radiation 10.0 270 < th dose independent rect. 1 7
187 27.41 radiation 40.0 90 < th dose dependent rect. 3 8
236 27.48 atmosphere 995.0 30 > th dose independent rect. 8 20
244 27.51 radiation 20.0 90 < th dose independent rect. 3 8
254 27.53 precipitation 0.1 270 < th dose independent rect. 6 20
258 27.53 precipitation 0.1 270 < th dose dependent rect. 6 20
294 27.60 radiation 40.0 270 < th dose dependent rect. 15 15
364 27.66 radiation 20.0 270 < th dose independent rect. 15 15
368 27.66 humidity 70.0 90 > th dose dependent rect. 21 6
384 27.68 temperature 15.0 270 > th dose independent rect. 15 15
388 27.68 humidity 90.0 720 < th dose dependent rect. 20 1
456 27.75 radiation 40.0 270 < th dose independent rect. 11 19
479 27.76 temperature 10.0 90 > th dose dependent rect. 8 19
493 27.78 radiation 40.0 270 < th dose dependent rect. 1 16
503 27.79 temperature 10.0 10 > th dose dependent rect. 8 20
517 27.81 wind 1.0 270 > th dose independent rect. 1 6
522 27.81 humidity 50.0 30 > th dose dependent rect. 4 4
569 27.86 radiation 10.0 10 < th dose independent rect. 4 18
595 27.89 atmosphere 995.0 270 > th dose independent rect. 6 20
619 27.91 temperature 15.0 270 > th dose independent rect. 11 10
620 27.91 temperature 15.0 30 > th dose independent rect. 17 15
635 27.93 humidity 90.0 720 > th dose dependent rect. 22 3
646 27.94 radiation 40.0 270 < th dose independent rect. 10 21
655 27.95 precipitation 0.1 270 < th dose independent rect. 15 15
662 27.95 precipitation 0.1 270 < th dose dependent rect. 15 15
682 27.97 wind 7.0 270 < th dose independent rect. 6 8
708 28.00 radiation 40.0 90 < th dose independent rect. 3 18
710 28.00 atmosphere 1015.0 90 < th dose independent rect. 8 19
717 28.01 precipitation 0.1 270 < th dose independent rect. 6 9
721 28.01 precipitation 0.1 270 < th dose dependent rect. 6 9
724 28.02 wind 9.0 1440 < th dose independent rect. 4 5
725 28.02 temperature 10.0 1440 > th dose independent rect. 4 5
728 28.02 humidity 50.0 1440 > th dose independent rect. 4 5
730 28.02 atmosphere 995.0 1440 > th dose independent rect. 4 5
731 28.02 atmosphere 1015.0 1440 < th dose independent rect. 4 5
735 28.02 temperature 10.0 1440 > th dose independent rect. 9 19
746 28.03 temperature 30.0 270 < th dose dependent rect. 3 2
799 28.06 temperature 10.0 270 > th dose independent rect. 6 9
800 28.06 atmosphere 1015.0 270 < th dose independent rect. 6 9
805 28.06 atmosphere 1015.0 10 < th dose independent rect. 8 20
820 28.07 atmosphere 995.0 270 > th dose independent rect. 5 22
837 28.08 atmosphere 995.0 270 > th dose independent rect. 6 9
839 28.08 atmosphere 1015.0 270 < th dose dependent rect. 3 2
843 28.08 humidity 90.0 720 < th dose dependent rect. 19 6
867 28.11 radiation 10.0 270 < th dose independent rect. 1 17
907 28.14 precipitation 0.1 270 < th dose independent rect. 2 16
909 28.14 humidity 90.0 720 < th dose dependent rect. 19 3
913 28.14 precipitation 0.1 270 < th dose dependent rect. 2 16
928 28.16 humidity 50.0 10 > th dose independent rect. 8 20
939 28.17 radiation 10.0 270 < th dose dependent sin 4 NA
944 28.17 radiation 40.0 90 < th dose dependent rect. 13 19
981 28.20 humidity 50.0 270 > th dose independent rect. 21 14
984 28.20 wind 1.0 90 > th dose independent rect. 8 19