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Os10g0537600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.77 (0.0292) R2 : 0.348
β1 : 2.2 (0.142) R2dD : 0.715 R2D : -0.112
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.96 (0.202) R2dE : 0.256 R2E : -0.216
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 20.2 (1.75) R2dD*E : 0.52 R2D*E : -0.555
γ1 : 0.429 (0.0662) R2dN8 : 0.103 R2N8 : -0.106
σ : 0.51
deviance : 119.85
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 24.76
memory length : 57
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18
open length of G : 14

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
114.81 0.503 8.77 2.14 0.302 -1.96 -0.324 20.9 0.388 12.3 24.9 40 18 14
143.2 0.562 8.87 1.08 0.33 -0.305 -0.693 -- 0.112 11.3 22.77 22 18.6 13.3
114.96 0.499 8.76 2.13 0.308 -1.89 -- 20.2 0.401 12.5 24.85 48 18 14.1
144.89 0.561 8.87 1.05 0.342 -0.264 -- -- 0.104 11.5 22.1 12 18.6 14.2
119.85 0.51 8.77 2.2 -- -1.96 -- 20.2 0.429 -- 24.76 57 18 14
144.43 0.563 8.88 1.05 0.4 -- -0.646 -- 0.0612 11.4 -- -- -- --
146.18 0.566 8.88 1.03 0.403 -- -- -- 0.0594 11.7 -- -- -- --
145.66 0.565 8.88 1.06 -- -0.436 -- -- 0.116 -- 9.684 4 18.8 13.2
170.47 0.611 8.92 -- 0.455 0.372 -- -- -0.124 12.7 19.1 3 19.2 16.2
156.41 0.584 8.89 1.01 -- -- -- -- 0.0545 -- -- -- -- --
173.9 0.617 8.91 -- 0.391 -- -- -- -0.0548 11.6 -- -- -- --
158.37 0.586 8.96 -- -- 0.916 -- -- -0.126 -- 21.21 310 19.8 18
183.53 0.632 8.92 -- -- -- -- -- -0.058 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.45 temperature 25.0 30 > th dose dependent rect. 18 14
3 119.45 temperature 25.0 30 > th dose independent rect. 18 5
11 122.46 temperature 25.0 30 > th dose dependent rect. 18 6
14 123.07 temperature 25.0 30 > th dose independent rect. 18 14
24 124.92 atmosphere 1000.0 10 > th dose independent rect. 19 23
29 125.46 temperature 25.0 30 > th dose dependent rect. 18 10
43 126.04 atmosphere 1000.0 30 > th dose dependent rect. 17 6
47 126.29 temperature 30.0 10 < th dose dependent rect. 18 1
52 126.63 humidity 70.0 10 > th dose independent rect. 18 1
53 126.63 humidity 80.0 30 < th dose dependent rect. 18 1
55 126.71 temperature 25.0 90 > th dose dependent rect. 18 1
56 126.72 temperature 30.0 10 < th dose independent rect. 18 1
58 126.76 temperature 25.0 10 > th dose independent rect. 18 2
59 126.76 temperature 25.0 10 > th dose dependent rect. 18 2
62 126.85 atmosphere 1000.0 30 > th dose independent rect. 23 23
67 127.03 wind 1.0 10 > th dose dependent rect. 18 1
73 127.15 atmosphere 1005.0 10 > th dose dependent rect. 18 1
75 127.16 humidity 60.0 10 > th dose dependent rect. 18 1
78 127.28 radiation 1.0 43200 < th dose dependent rect. 19 1
81 127.31 atmosphere 1005.0 90 > th dose dependent rect. 17 2
87 127.43 temperature 25.0 30 > th dose independent rect. 18 10
90 127.46 radiation 10.0 30 < th dose independent rect. 6 17
106 127.85 atmosphere 1015.0 10 < th dose dependent rect. 18 1
109 127.91 humidity 80.0 10 < th dose independent rect. 18 1
119 128.04 atmosphere 1000.0 30 > th dose independent rect. 5 18
122 128.09 wind 1.0 10 > th dose independent rect. 18 1
123 128.09 temperature 10.0 10 > th dose independent rect. 18 1
126 128.09 atmosphere 1010.0 10 < th dose independent rect. 18 1
128 128.09 radiation 20.0 10 < th dose independent rect. 18 1
131 128.09 precipitation 0.1 10 < th dose independent rect. 18 1
132 128.09 temperature 10.0 10 > th dose independent rect. 19 23
133 128.09 precipitation 0.1 10 < th dose dependent rect. 18 1
134 128.12 atmosphere 995.0 10 > th dose independent rect. 18 1
136 128.14 wind 5.0 30 > th dose independent rect. 18 1
139 128.16 temperature 10.0 90 > th dose dependent rect. 23 18
143 128.24 atmosphere 995.0 10 > th dose dependent rect. 18 1
146 128.30 radiation 40.0 10 < th dose dependent rect. 18 1
149 128.34 temperature 10.0 10 > th dose dependent rect. 18 1
152 128.38 humidity 90.0 90 < th dose independent rect. 17 6
153 128.41 atmosphere 1000.0 270 > th dose independent rect. 24 23
155 128.42 radiation 10.0 43200 < th dose dependent rect. 23 1
169 128.68 radiation 1.0 10 < th dose independent rect. 18 1
203 128.87 radiation 1.0 30 < th dose dependent rect. 18 1
213 128.95 wind 9.0 10 < th dose independent rect. 18 1
227 129.13 precipitation 0.1 30 < th dose independent rect. 19 23
228 129.13 precipitation 0.1 30 < th dose dependent rect. 19 23
231 129.17 atmosphere 1000.0 90 > th dose independent rect. 17 6
233 129.19 wind 9.0 30 < th dose independent rect. 19 23
242 129.35 wind 9.0 30 < th dose dependent rect. 18 1
245 129.36 humidity 70.0 90 > th dose independent rect. 17 6
253 129.47 atmosphere 995.0 30 > th dose dependent rect. 5 18
255 129.48 humidity 70.0 90 > th dose independent rect. 15 8
271 129.62 temperature 10.0 1440 > th dose independent rect. 19 1
274 129.62 temperature 30.0 1440 < th dose independent rect. 19 1
278 129.62 humidity 50.0 1440 > th dose independent rect. 19 1
280 129.62 atmosphere 995.0 1440 > th dose independent rect. 19 1
284 129.62 radiation 1.0 1440 < th dose independent rect. 19 1
305 129.62 temperature 10.0 1440 > th dose independent rect. 20 23
308 129.62 radiation 1.0 1440 < th dose dependent rect. 19 1
321 129.66 radiation 20.0 90 < th dose independent rect. 15 8
322 129.72 atmosphere 1000.0 90 > th dose independent rect. 3 20
329 129.81 humidity 90.0 10 < th dose dependent rect. 22 1
337 129.87 radiation 30.0 90 < th dose dependent rect. 15 8
340 129.90 humidity 90.0 10 < th dose independent rect. 22 1
344 129.99 wind 9.0 30 < th dose independent rect. 23 23
346 130.02 radiation 20.0 90 < th dose independent rect. 13 10
355 130.09 atmosphere 1005.0 10 > th dose independent rect. 22 1
368 130.19 wind 9.0 1440 < th dose independent rect. 23 1
369 130.19 temperature 10.0 1440 > th dose independent rect. 23 1
372 130.19 temperature 30.0 1440 < th dose independent rect. 23 1
376 130.19 humidity 50.0 1440 > th dose independent rect. 23 1
386 130.19 atmosphere 995.0 1440 > th dose independent rect. 23 1
387 130.19 radiation 1.0 1440 < th dose independent rect. 23 1
407 130.19 temperature 10.0 1440 > th dose independent rect. 24 23
421 130.22 wind 5.0 30 < th dose dependent rect. 22 1
423 130.23 atmosphere 1005.0 30 > th dose dependent rect. 22 1
424 130.23 radiation 10.0 30 < th dose dependent rect. 6 17
427 130.25 temperature 25.0 30 > th dose independent rect. 22 1
428 130.25 temperature 30.0 90 < th dose independent rect. 17 6
430 130.26 wind 1.0 30 > th dose independent rect. 22 1
431 130.26 wind 5.0 90 < th dose independent rect. 17 6
433 130.27 wind 5.0 30 < th dose independent rect. 22 1
439 130.30 temperature 25.0 30 > th dose dependent rect. 22 1
441 130.31 radiation 30.0 90 < th dose dependent rect. 13 10
446 130.33 temperature 10.0 30 > th dose independent rect. 22 1
448 130.33 temperature 30.0 30 < th dose independent rect. 22 1
449 130.33 humidity 50.0 30 > th dose independent rect. 22 1
453 130.33 atmosphere 1010.0 30 < th dose independent rect. 22 1
455 130.33 radiation 1.0 30 < th dose independent rect. 22 1
460 130.33 precipitation 0.1 30 < th dose independent rect. 22 1
461 130.33 temperature 10.0 30 > th dose independent rect. 23 23
462 130.33 temperature 30.0 30 < th dose dependent rect. 22 1
464 130.33 radiation 1.0 30 < th dose dependent rect. 22 1
469 130.33 precipitation 0.1 30 < th dose dependent rect. 22 1
473 130.35 temperature 10.0 30 > th dose dependent rect. 22 1
474 130.36 temperature 25.0 10 > th dose dependent sin 11 NA
480 130.39 precipitation 0.1 30 < th dose independent rect. 23 23
482 130.39 precipitation 0.1 30 < th dose dependent rect. 23 23
483 130.40 temperature 25.0 270 > th dose independent rect. 15 5
486 130.42 humidity 90.0 30 < th dose independent rect. 5 18
488 130.43 humidity 50.0 30 > th dose dependent rect. 22 1
491 130.44 atmosphere 1015.0 30 < th dose dependent rect. 22 1
493 130.45 temperature 10.0 30 > th dose dependent rect. 23 23
500 130.50 temperature 25.0 270 > th dose dependent rect. 15 17
506 130.56 wind 9.0 90 < th dose independent rect. 23 18
512 130.58 atmosphere 995.0 90 > th dose dependent rect. 2 21
520 130.62 temperature 25.0 30 > th dose dependent rect. 21 11
523 130.64 atmosphere 1000.0 270 > th dose independent rect. 3 16
534 130.70 wind 1.0 30 > th dose dependent rect. 22 1
543 130.74 temperature 20.0 30 > th dose independent rect. 23 6
546 130.75 temperature 10.0 30 > th dose dependent rect. 23 6
547 130.76 temperature 30.0 270 < th dose independent rect. 2 17
553 130.79 atmosphere 995.0 30 > th dose dependent rect. 17 15
589 130.87 wind 1.0 90 > th dose independent rect. 17 6
590 130.87 wind 5.0 90 < th dose independent rect. 15 8
599 130.94 temperature 10.0 30 > th dose dependent rect. 19 23
606 130.98 temperature 20.0 30 > th dose independent rect. 23 18
610 130.99 precipitation 0.1 90 < th dose independent rect. 17 6
611 130.99 precipitation 0.1 90 < th dose dependent rect. 17 6
614 131.02 temperature 25.0 4320 > th dose dependent rect. 5 2
620 131.04 temperature 10.0 90 > th dose independent rect. 17 6
621 131.04 radiation 20.0 90 < th dose independent rect. 17 6
625 131.04 temperature 10.0 90 > th dose independent rect. 23 18
635 131.08 radiation 10.0 30 < th dose independent rect. 10 13
637 131.10 radiation 30.0 14400 < th dose independent rect. 17 7
639 131.11 temperature 25.0 4320 > th dose independent rect. 23 2
660 131.19 temperature 30.0 720 < th dose independent rect. 3 8
675 131.24 atmosphere 1015.0 90 < th dose independent rect. 17 6
683 131.27 precipitation 0.1 90 < th dose independent rect. 23 18
685 131.27 precipitation 0.1 90 < th dose dependent rect. 23 18
687 131.28 atmosphere 1000.0 90 > th dose independent rect. 5 14
698 131.33 temperature 20.0 90 > th dose independent rect. 23 3
728 131.45 temperature 30.0 30 < th dose independent rect. 19 23
734 131.47 wind 9.0 90 < th dose independent rect. 17 6
750 131.56 temperature 10.0 1440 > th dose independent rect. 18 6
753 131.56 humidity 50.0 1440 > th dose independent rect. 18 6
755 131.56 radiation 20.0 1440 < th dose independent rect. 18 6
767 131.56 temperature 10.0 1440 > th dose independent rect. 24 18
782 131.61 temperature 25.0 30 > th dose independent sin 12 NA
783 131.61 temperature 20.0 270 > th dose independent rect. 23 1
819 131.75 humidity 50.0 30 > th dose independent rect. 23 18
831 131.79 wind 9.0 30 < th dose dependent rect. 17 6
842 131.84 radiation 10.0 30 < th dose independent rect. 6 13
843 131.85 radiation 30.0 4320 > th dose independent rect. 15 1
875 131.88 wind 1.0 4320 > th dose dependent rect. 13 3
880 131.89 temperature 25.0 30 < th dose independent sin 12 NA
885 131.91 humidity 90.0 30 < th dose independent rect. 2 21
894 131.93 radiation 10.0 30 < th dose dependent rect. 23 7
895 131.94 temperature 25.0 4320 < th dose independent rect. 5 1
902 131.96 atmosphere 995.0 30 > th dose dependent rect. 17 17
905 131.97 wind 9.0 4320 < th dose dependent rect. 13 3
911 132.02 radiation 10.0 30 < th dose dependent rect. 10 13
919 132.05 wind 1.0 4320 > th dose dependent rect. 15 1
923 132.06 humidity 80.0 14400 < th dose dependent rect. 18 13
927 132.09 temperature 25.0 4320 < th dose independent rect. 23 3
934 132.10 atmosphere 1015.0 90 < th dose independent rect. 23 18
942 132.13 atmosphere 995.0 1440 > th dose independent rect. 18 6
944 132.13 wind 9.0 4320 < th dose dependent rect. 15 1
947 132.14 temperature 30.0 270 < th dose independent rect. 15 4
954 132.16 atmosphere 1000.0 270 > th dose independent rect. 15 16
955 132.16 wind 1.0 90 > th dose independent rect. 23 18
958 132.17 radiation 1.0 270 > th dose independent rect. 17 13
963 132.18 atmosphere 995.0 90 > th dose independent rect. 23 18