BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0556000 Os08g0556000|AK068463
(624 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0556000 Similar to YTH domain protein 2 (High-glucose-... 1245 0.0
Os08g0224200 Similar to Ythdf2-prov protein 462 e-130
Os04g0608800 YT521-B-like protein family protein 437 e-122
Os03g0748000 YT521-B-like protein family protein 309 3e-84
Os07g0170300 YT521-B-like protein family protein 305 9e-83
Os03g0158500 YT521-B-like protein family protein 293 3e-79
AK111489 289 4e-78
Os01g0679900 Similar to Ythdf2-prov protein 281 1e-75
Os04g0129300 YT521-B-like protein family protein 275 5e-74
Os03g0317000 Similar to High-glucose-regulated protein 8-like 269 4e-72
Os05g0105600 YT521-B-like protein family protein 260 2e-69
Os01g0329800 YT521-B-like protein family protein 225 9e-59
>Os08g0556000 Similar to YTH domain protein 2 (High-glucose-regulated protein 8)
(NY-REN-2 antigen) (CLL-associated antigen KW-14)
Length = 624
Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/624 (96%), Positives = 605/624 (96%)
Query: 1 MESAHGGSDRPGSMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEKVLEPTISHDSNGINLP 60
MESAHGGSDRPGSMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEKVLEPTISHDSNGINLP
Sbjct: 1 MESAHGGSDRPGSMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEKVLEPTISHDSNGINLP 60
Query: 61 SEGQAQAGTSNIGGGHNAAYPQTMYSSQAQPFYYQGPGYDNPSNEWDGYPPYVSVEGLEA 120
SEGQAQAGTSNIGGGHNAAYPQTMYSSQAQPFYYQGPGYDNPSNEWDGYPPYVSVEGLEA
Sbjct: 61 SEGQAQAGTSNIGGGHNAAYPQTMYSSQAQPFYYQGPGYDNPSNEWDGYPPYVSVEGLEA 120
Query: 121 GPAVVYNDDPQLMYHGGYGYDPYAHYSPISTPVPAAVSGDGQLYSPQQFSFSAPYYQQSV 180
GPAVVYNDDPQLMYHGGYGYDPYAHYSPISTPVPAAVSGDGQLYSPQQFSFSAPYYQQSV
Sbjct: 121 GPAVVYNDDPQLMYHGGYGYDPYAHYSPISTPVPAAVSGDGQLYSPQQFSFSAPYYQQSV 180
Query: 181 PPGMPYLSSPTPISQGEAMVPIDPTQGAFIAETLSPNSFLFGPRPEWFRSSEGNXXXXXX 240
PPGMPYLSSPTPISQGEAMVPIDPTQGAFIAETLSPNSFLFGPRPEWFRSSEGN
Sbjct: 181 PPGMPYLSSPTPISQGEAMVPIDPTQGAFIAETLSPNSFLFGPRPEWFRSSEGNGSFPSP 240
Query: 241 XXXXXXXXXXXXXFGQSNFPMASGMQSPQHRPFYGFGTPSDSYGRVFSHGGYFPQATNYG 300
FGQSNFPMASGMQSPQHRPFYGFGTPSDSYGRVFSHGGYFPQATNYG
Sbjct: 241 AASPQPAGGVSGPFGQSNFPMASGMQSPQHRPFYGFGTPSDSYGRVFSHGGYFPQATNYG 300
Query: 301 GPFPSFGLNGTSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDGGK 360
GPFPSFGLNGTSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDGGK
Sbjct: 301 GPFPSFGLNGTSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDGGK 360
Query: 361 DEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSA 420
DEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSA
Sbjct: 361 DEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSA 420
Query: 421 YREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIV 480
YREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIV
Sbjct: 421 YREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIV 480
Query: 481 KDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEE 540
KDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEE
Sbjct: 481 KDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEE 540
Query: 541 RERALLDNKARLHQQHQLPSSTVVEPKKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNS 600
RERALLDNKARLHQQHQLPSSTVVEPKKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNS
Sbjct: 541 RERALLDNKARLHQQHQLPSSTVVEPKKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNS 600
Query: 601 ADKGASGDSSVAAKPLEVKEAGLA 624
ADKGASGDSSVAAKPLEVKEAGLA
Sbjct: 601 ADKGASGDSSVAAKPLEVKEAGLA 624
>Os08g0224200 Similar to Ythdf2-prov protein
Length = 577
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/580 (46%), Positives = 346/580 (59%), Gaps = 54/580 (9%)
Query: 34 EEQTIPSKDEKVLEPTISHDSNGINLPSEGQAQAGTSNIG-GGHNAAYPQTMYSSQAQPF 92
+EQ + S +EK+ T S + S AQ S +G GG Y +Y+ Q Q
Sbjct: 20 KEQILSSTNEKM---TTSVPQGASSSKSPKGAQEKASFLGKGGEQPFYQPNVYAPQPQTI 76
Query: 93 YYQGPGYDNPSNEWDGYPPYVSVEGLEAGPAVVYNDDPQLMYHGGYGYDPYAHYSPISTP 152
Y GY N +W+ YP YV++EGL + +YND+ +M GY +P Y S
Sbjct: 77 Y--SGGYLNHLGQWEEYPHYVNMEGLHSVSPGIYNDNQSIMLSPGYANNPQMMYGAYSPG 134
Query: 153 VPAAVSGDGQLYSPQQFSFSAPYYQQSVPPGMPYLSSPTPISQGEAMVPIDPTQGAFIAE 212
V GDGQ Y P F FS+PYYQ P M Y +S T +SQG+ M+ E
Sbjct: 135 V-----GDGQPYLPLHFPFSSPYYQPPASPSMGYSNSATGMSQGDPMLQ---------QE 180
Query: 213 TLSPNSFLFGPRPEWFRSSEGNXXXXXXXXXXXXXXXXXXXFGQSNFPMASGMQSPQHRP 272
P+ L+ P P + + FGQ N P+A GM
Sbjct: 181 YFLPDGLLYSPTPGYHQ------PFGSFDRASTQPSSTPGLFGQGNTPLAFGMH------ 228
Query: 273 FYGFGTPSDSYGRVFSHGGYFP--QATNYGGPFPSFGLNGTSSIPMEKGRRRGRGNALLC 330
+G +++ G Y P Q +GG PS+ +G + + +G+
Sbjct: 229 ----------HGSMYAPGSYKPRQQGGKFGGTTPSWS-SGRRFGTFDLSANQQKGSMPFG 277
Query: 331 SCNGSLDFLNEQSRGPRATRPKKQPEDGG----KDEKPSAGVDCELYNRPDFVTEYKNAR 386
NG+L+FLNEQ+RGPRAT+PKKQ + K+EK VD ELYNRPDFVTEYK+A+
Sbjct: 278 IQNGALEFLNEQNRGPRATKPKKQDTENSSIDDKNEKNVPLVDSELYNRPDFVTEYKDAK 337
Query: 387 FFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQFC 446
FF+IKSY+ED+VH+SIKY VWAST +GN+KLDSAYR AKEKE++CPIFL FSVN S QFC
Sbjct: 338 FFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRLAKEKEDYCPIFLFFSVNGSGQFC 397
Query: 447 GVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNLFRHIILENNDNKPVTNSRD 506
GVAEMIGPVDF+KSVDYWQQDKW+GQFPVKWHI+KDVPNNL RHIILENNDNKPVTNSRD
Sbjct: 398 GVAEMIGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNNLLRHIILENNDNKPVTNSRD 457
Query: 507 TQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLDNKARLHQQHQLPSSTVVEP 566
TQEVKLE G++ML IFK+HE + +IL+DFDFYE+RE+AL +N+ + Q P+S ++
Sbjct: 458 TQEVKLEHGLQMLTIFKNHESETNILEDFDFYEQREKALQENR-----RQQQPASPELQK 512
Query: 567 KKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNSADKGAS 606
+L+ HI+ +F Q V+L E +N A +G S
Sbjct: 513 PAENKALGELMAHISDTFGQTVQLKETENGESKPAVEGVS 552
>Os04g0608800 YT521-B-like protein family protein
Length = 568
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/612 (42%), Positives = 345/612 (56%), Gaps = 94/612 (15%)
Query: 13 SMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEKVLEPTISHDSNGINLPSEGQAQAGTSNI 72
S D EP E + V+ +P + S+D L T H ++ + Q +
Sbjct: 10 SADHMEP---LESRLVVEKSPSTSILSSEDHN-LSSTALHGASSLKSTKSAQEKGSFLGK 65
Query: 73 GGGHNAAYPQTMYSSQAQPFYYQGPGYDNPSNEWDGYPPYVSVEGLEAGPAVVYNDDPQL 132
GG + Y +Y+ Q + GY N +W+ YP S +G +A V+Y+
Sbjct: 66 GGEQHFIYQPNVYTPQPHTVF--SGGYLNHLGQWEEYPHVASADGTDAASPVMYSS---- 119
Query: 133 MYHGGYGYDPYAHYSPISTPVPAAVSGDGQLYSPQQFSFSAPYYQQSVPPGMPYLSSPTP 192
YSP+ T GD Q Y P S+PYYQ P M Y +S T
Sbjct: 120 -------------YSPVPT------MGDSQPYYPLHCPLSSPYYQPPASPSMGYSNSATG 160
Query: 193 ISQGEAMVPIDPTQGAFIAETLSPNSFLFGPRP---EWFRSSEGNXXXXXXXXXXXXXXX 249
+SQ DP Q ++ P+ L+ P P + F S +G
Sbjct: 161 MSQ------FDPMQEYYL-----PDGLLYSPTPGFHQHFGSFDGTQMQQSVTGI------ 203
Query: 250 XXXXFGQSNFPMASGMQSPQHRPFYGFGTPSDSYGRVFSHGGYFP--QATNYGGPFPSFG 307
FGQ N P+ASGM G ++S G Y Q N+GG P++
Sbjct: 204 ----FGQGNIPLASGMHQ----------------GSMYSSGSYKARQQVGNFGGSTPNWS 243
Query: 308 LNGTSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDGG---KDEKP 364
P ++G + +G SL+F+NEQ+RGPRAT+PKK+ + K+ K
Sbjct: 244 AASRRFSPFDRGFKHDKG---------SLEFMNEQNRGPRATKPKKEVNNSSTEDKNRKS 294
Query: 365 SAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREA 424
+ D LYN+ DFV EY++A+FF+IKSY+ED+VHKSIKYGVWAST +GN+KLD+AYREA
Sbjct: 295 ALINDSNLYNQHDFVIEYEDAKFFVIKSYTEDHVHKSIKYGVWASTASGNRKLDAAYREA 354
Query: 425 KEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVP 484
KEKE CPIFL FSVN S QFCGVAEMIGPVDF+KSVDYWQQDKW+GQFPVKWHI+KDVP
Sbjct: 355 KEKEATCPIFLFFSVNGSGQFCGVAEMIGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVP 414
Query: 485 NNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERA 544
N+L RHIILENN+NKPVTNSRDTQEV+L+ G++ML IFK+HE + +IL+DFDFYE+RE+A
Sbjct: 415 NSLLRHIILENNENKPVTNSRDTQEVRLDHGLQMLTIFKNHEVETTILEDFDFYEQREKA 474
Query: 545 LLDNKARLHQQHQLPSSTVVEPKKPLTVA---TDLVGHITKSFAQAVRLGEAKNVSPNSA 601
+LD + R QQH T E +KP+ A DL+ I+ +FA+AV+LGE K +
Sbjct: 475 MLDIRQRQKQQH-----TDSEVQKPMVEAKEPVDLMNQISATFARAVQLGETKG---SRE 526
Query: 602 DKGASGDSSVAA 613
DK D+S AA
Sbjct: 527 DKPKVEDASAAA 538
>Os03g0748000 YT521-B-like protein family protein
Length = 661
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/322 (52%), Positives = 202/322 (62%), Gaps = 29/322 (9%)
Query: 256 QSNFPMASGMQSPQHRPFYGFGTPSDSY-GRVFSHGGYFPQATNYGGPFPS---FGLN-- 309
QS P A+ M P G G S SY R++ + Q YG + FG N
Sbjct: 283 QSQRPTANLMGMHAQIPSSGMGLTSPSYHTRMYPDNRLYGQYGQYGNALKTGLGFGSNMY 342
Query: 310 -----GTSSIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDG------ 358
G I K + RGR + S N D E +RGPR+ K Q + G
Sbjct: 343 NSRNNGRWGIVDSKYKPRGRASFGFGSEN--QDGFTELNRGPRSGGFKHQKQFGPSVTIA 400
Query: 359 ---------GKDEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWAS 409
GK E SA D +N+ F YK+A+FF+IKSYSED+VHKSIKY VWAS
Sbjct: 401 VKGQALPSVGKQEN-SAIPDKGQFNQEGFPVTYKDAKFFVIKSYSEDDVHKSIKYNVWAS 459
Query: 410 TTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKW 469
T NGNKKLD+ YREA+EK CP+FL FSVN S QF GVAEM+GPVDFEK+VDYWQQDKW
Sbjct: 460 TPNGNKKLDAGYREAQEKSSECPVFLFFSVNTSGQFVGVAEMVGPVDFEKTVDYWQQDKW 519
Query: 470 TGQFPVKWHIVKDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDA 529
G FP+KWH+VKDVPNN+ +HI L+NNDNKPVTNSRDTQEVKLEQG+EMLKIFKDH
Sbjct: 520 NGCFPIKWHVVKDVPNNILKHITLDNNDNKPVTNSRDTQEVKLEQGLEMLKIFKDHISKT 579
Query: 530 SILDDFDFYEERERALLDNKAR 551
SILDDF FYE R++ + + +A+
Sbjct: 580 SILDDFGFYENRQKLMQEKRAK 601
>Os07g0170300 YT521-B-like protein family protein
Length = 602
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/315 (52%), Positives = 204/315 (64%), Gaps = 22/315 (6%)
Query: 256 QSNFPMASGMQSPQHRPFYGFGTPS--DSYGRVFSHGGYFPQATNYGGPFPSFGL-NGTS 312
Q+ +P G+Q+P G PS + G +G + YG GL G +
Sbjct: 214 QNTYPHLMGLQTPTSP----LGPPSIYSASGMYGYNGSSYGSGLWYGSHLYGSGLYGGWN 269
Query: 313 SIPMEKGRRRGRGNALLCSCNGSLDFLNEQSRGPRA------------TRPKKQPEDGGK 360
++ K RGRGN +G+ D NE RGPR+ P K E
Sbjct: 270 ALSDGKYNPRGRGNGSYGYIHGNQDGFNELRRGPRSGLFNNQQGVGATVAPVKGQELSAS 329
Query: 361 DEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSA 420
D S V + YNR DFV Y +A+FFIIKSYSED+VHKSIKY VWAST+NGNKKLD+A
Sbjct: 330 DS--SLSVMKDQYNRADFVETYSDAKFFIIKSYSEDDVHKSIKYNVWASTSNGNKKLDAA 387
Query: 421 YREAKEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIV 480
Y+EAKEK +FLLFSVNAS QF G+AEM+G VDF K++++WQQDKWTG FPVKWHIV
Sbjct: 388 YQEAKEKSSDSSVFLLFSVNASGQFVGLAEMVGRVDFNKTLEHWQQDKWTGCFPVKWHIV 447
Query: 481 KDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEE 540
KDVPN+L +HIILENN+NKPVTN RDT EVKLE G+++LKIFKDH S+LDDFDFY+
Sbjct: 448 KDVPNSLLKHIILENNENKPVTNCRDTHEVKLEPGLQVLKIFKDHVCKTSLLDDFDFYDN 507
Query: 541 RERALLDNKARLHQQ 555
RE+ + + KA+ HQQ
Sbjct: 508 REKMMQERKAK-HQQ 521
>Os03g0158500 YT521-B-like protein family protein
Length = 707
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 170/242 (70%), Gaps = 14/242 (5%)
Query: 322 RGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDG-------------GKDEKPSAGV 368
RGRGN N S D E +RGPR+ R K Q G D + V
Sbjct: 387 RGRGNGYYGFGNESQDGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDV 446
Query: 369 -DCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEK 427
D +NR DF +Y +A+FF+IKSYSED++HKSIKY VWASTTNGNKKLD+AY+EA+ K
Sbjct: 447 PDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAK 506
Query: 428 EEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNL 487
CPIFL FSVN S QF GVAEM G VDFEK+++YWQQDKW G +KWHIVKDVPNN+
Sbjct: 507 SSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNI 566
Query: 488 FRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLD 547
+HIILENN+NKPVTNSRDTQEV L+QG++MLKIFK+H SILDDF FYE R++ + +
Sbjct: 567 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLMQE 626
Query: 548 NK 549
+
Sbjct: 627 KR 628
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 91 PFYYQGPGYDNPSNEWDGYPPYVSVEGLEAGPAVVYNDDPQLMYHGGYGYDPYAHYSPIS 150
P YY G GYD +EWD YP YV+ +G+E PA VY D +Y GYGY PY YSP S
Sbjct: 101 PAYYYG-GYDGSVSEWDDYPRYVNPDGVEITPA-VYGD----IY--GYGYAPYGAYSPAS 152
Query: 151 TPVPAAVSGDGQLYSPQQFSFSAPYYQQSVP 181
+PVP DGQ++ Q + + YYQ P
Sbjct: 153 SPVPTV---DGQMFG-QHYQYPTSYYQPPTP 179
>AK111489
Length = 615
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 169/242 (69%), Gaps = 14/242 (5%)
Query: 322 RGRGNALLCSCNGSLDFLNEQSRGPRATRPKKQPEDG-------------GKDEKPSAGV 368
RGRGN N S D E +RGPR+ R K Q G D + V
Sbjct: 295 RGRGNGYYGFGNESQDGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDV 354
Query: 369 -DCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEK 427
D +NR DF +Y +A+FF+IKSYSED++HKSIKY VWASTTNGNKKLD+AY+EA+ K
Sbjct: 355 PDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAK 414
Query: 428 EEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNL 487
CPIFL FSVN S QF GVAEM G VDFEK+++YWQQDKW G +KW IVKDVPNN+
Sbjct: 415 SSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWRIVKDVPNNI 474
Query: 488 FRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLD 547
+HIILENN+NKPVTNSRDTQEV L+QG++MLKIFK+H SILDDF FYE R++ + +
Sbjct: 475 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLMQE 534
Query: 548 NK 549
+
Sbjct: 535 KR 536
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 91 PFYYQGPGYDNPSNEWDGYPPYVSVEGLEAGPAVVYNDDPQLMYHGGYGYDPYAHYSPIS 150
P YY G GYD +EWD YP YV+ +G+E PA VY D +Y GYGY PY YSP S
Sbjct: 9 PAYYYG-GYDGSVSEWDDYPRYVNPDGVEITPA-VYGD----IY--GYGYAPYGAYSPAS 60
Query: 151 TPVPAAVSGDGQLYSPQQFSFSAPYYQQSVP 181
+PVP DGQ++ Q + + YYQ P
Sbjct: 61 SPVPTV---DGQMFG-QHYQYPTSYYQPPTP 87
>Os01g0679900 Similar to Ythdf2-prov protein
Length = 609
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/248 (56%), Positives = 172/248 (69%), Gaps = 6/248 (2%)
Query: 310 GTSSIPMEKGRRRGRGNAL-LCSCNGSLDFLNEQSRGPRATRPKKQPEDGGKDEKPS-AG 367
G S EK + R + N C + +L ++ S P+ GG D PS
Sbjct: 290 GRSWNSTEKLKARSKLNGYGDCDISDNLTDNSKNSLSPQGGHYGLSSAGGGNDVTPSPVA 349
Query: 368 VDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKE- 426
+ + YN PDFVT+Y A FF+IKSYSED++HKSIKY VWAST NGNK+LD+A++ A+E
Sbjct: 350 MSRDAYNLPDFVTKYDQALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFKLAQER 409
Query: 427 ---KEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDV 483
K CP+FL FSVNAS QFCGVAEM+GPVDF +++++WQQDKW G FPVKWHI+KDV
Sbjct: 410 VAEKGTKCPMFLFFSVNASGQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFPVKWHIIKDV 469
Query: 484 PNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERER 543
PN FRHIILENN+NKPVTNSRDTQEVK QG EML IFK+ SILDDFDFYE R++
Sbjct: 470 PNPQFRHIILENNENKPVTNSRDTQEVKFPQGSEMLNIFKNFSCKTSILDDFDFYENRQK 529
Query: 544 ALLDNKAR 551
+ D + +
Sbjct: 530 VMQDRRGK 537
>Os04g0129300 YT521-B-like protein family protein
Length = 675
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 191/283 (67%), Gaps = 21/283 (7%)
Query: 279 PSDSYGRVFSHGGYFPQ-------ATNYGGPFPSFGL-NGTSSIPMEKGRRRGRGNALLC 330
P +YGR SHG + + ATN F + G ++ R + + +
Sbjct: 361 PQLNYGRGASHGNRYSRDSFVSSIATN-----QRFKMGTGKHTVTRSDHHRTIKNDNV-- 413
Query: 331 SCNGSLDFLNEQSRGPRATRPKKQPEDGGKDEKPSAGVDCELYNRPDFVTEYKNARFFII 390
C S D L EQ RGPRA + + +++ S V + +NRPDF+ EY+ A+FF+I
Sbjct: 414 -CKHSDDTL-EQVRGPRANKLENATRSKIQEDIRSPLVRRDQFNRPDFIVEYEQAKFFMI 471
Query: 391 KSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREA----KEKEEHCPIFLLFSVNASAQFC 446
KSYSED++HK IKY VWAST +GN KLD+A+REA KEK + CP+FL FSVN+S QF
Sbjct: 472 KSYSEDDIHKGIKYNVWASTPHGNNKLDAAFREAQILIKEKGKKCPVFLFFSVNSSGQFV 531
Query: 447 GVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNLFRHIILENNDNKPVTNSRD 506
G+AE++GPVDF+K++D+W+ D+W G FPV WHI+KD+PN LF+HI LENNDN+ VT SRD
Sbjct: 532 GLAEILGPVDFKKTMDFWKLDRWNGFFPVTWHIIKDIPNRLFKHITLENNDNRIVTFSRD 591
Query: 507 TQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLDNK 549
TQE+ L QG++MLKIFKD++++ S+LDDF+FYEE+E A K
Sbjct: 592 TQEIGLLQGLKMLKIFKDYDQETSLLDDFNFYEEKESARCAKK 634
>Os03g0317000 Similar to High-glucose-regulated protein 8-like
Length = 709
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 146/181 (80%), Gaps = 1/181 (0%)
Query: 373 YNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKE-EHC 431
YN+ F ++ +A+FF+IKSYSED+VHKSIKY VW+ST NGNK+LD+AY + + + C
Sbjct: 290 YNKVHFPVDHPDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKRLDAAYSDVQGRALGKC 349
Query: 432 PIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNLFRHI 491
PIFL FSVNAS QFCGVAEM+GPVDF K +D+WQQDKW+G FPVKWH+VKDVPN+ FRHI
Sbjct: 350 PIFLFFSVNASGQFCGVAEMVGPVDFHKDMDFWQQDKWSGSFPVKWHLVKDVPNSTFRHI 409
Query: 492 ILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLDNKAR 551
ILENN+NKPVTNSRDTQE+ + G MLK+FKD SILDDF FYE R++A+L+ K R
Sbjct: 410 ILENNENKPVTNSRDTQEIPFKSGTNMLKLFKDGPLTTSILDDFSFYEGRQKAMLEEKCR 469
Query: 552 L 552
Sbjct: 470 C 470
>Os05g0105600 YT521-B-like protein family protein
Length = 638
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 155/217 (71%), Gaps = 4/217 (1%)
Query: 339 LNEQSRGPRATRPKKQPEDGGKDEKPSAGVDCELYNRPDFVTEYKNARFFIIKSYSEDNV 398
+ +Q RGPRA + K+ V + NRP+F +Y++A+FF+IKSYSED+V
Sbjct: 386 IRDQVRGPRANKLNNSSTSSIKNNAIPPLVCRDQINRPEFTVQYEHAKFFMIKSYSEDDV 445
Query: 399 HKSIKYGVWASTTNGNKKLDSAYREA----KEKEEHCPIFLLFSVNASAQFCGVAEMIGP 454
HK IKY VWAST NGN KLD+A+ EA KE+ + CPIFL FSVN S QF G+AEM+GP
Sbjct: 446 HKGIKYNVWASTPNGNNKLDAAFHEAQILMKEQGKRCPIFLFFSVNTSGQFVGLAEMLGP 505
Query: 455 VDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNLFRHIILENNDNKPVTNSRDTQEVKLEQ 514
VDF+K++D+WQQDKW G FPV WHI+KD+PN F+HI LENN+ K VT SRDTQE+ L Q
Sbjct: 506 VDFKKTMDFWQQDKWNGFFPVMWHIIKDIPNRFFKHITLENNEGKVVTFSRDTQEIGLPQ 565
Query: 515 GMEMLKIFKDHEEDASILDDFDFYEERERALLDNKAR 551
G+EMLKIFK + + SILDDF FYEE+E K R
Sbjct: 566 GLEMLKIFKAYHQGTSILDDFYFYEEKENMRHAQKGR 602
>Os01g0329800 YT521-B-like protein family protein
Length = 708
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 368 VDCELYNRPDFVTEYKNARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREA--- 424
+ C YN D +Y A+FF+IKS ED+VHKSIKYGVW+S+++GN KLD A+++A
Sbjct: 321 IRCNQYNSDDLRVDYPFAKFFVIKSIGEDDVHKSIKYGVWSSSSSGNSKLDIAFKDANRI 380
Query: 425 -KEKEEHCPIFLLFSVNASAQFCGVAEMIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDV 483
K CP+FL FSVN S FCG+AEM+GPVDF K +D+W QDKWTG FPV+WHIVKDV
Sbjct: 381 AKRNSTKCPVFLFFSVNGSGLFCGMAEMVGPVDFHKDMDFWCQDKWTGSFPVRWHIVKDV 440
Query: 484 PNNLFRHIILENNDNKPVTNSRDTQEVKLEQGMEMLKIFKDHEEDASILDDFDFYEERE 542
PN +HI+L+NN+NKPVT+SRDTQE+ G+ MLKI K + +LDDF YEE E
Sbjct: 441 PNYTLQHILLQNNENKPVTHSRDTQEIPYVPGISMLKILKAIKVKECLLDDFMKYEEDE 499
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,692,321
Number of extensions: 1219462
Number of successful extensions: 2777
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2753
Number of HSP's successfully gapped: 15
Length of query: 624
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 517
Effective length of database: 11,448,903
Effective search space: 5919082851
Effective search space used: 5919082851
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 159 (65.9 bits)