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Os04g0129300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : YT521-B-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.9 (0.0145) R2 : 0.298
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.426 (0.0306) R2dN8 : 0.385 R2N8 : 0.298
σ : 0.274
deviance : 34.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.78 0.204 8.85 0.933 0.143 -0.0284 -0.308 -1.02 -0.29 0.18 24.99 3803 -- --
19.39 0.207 8.89 0.671 0.202 -0.0706 -0.216 -- -0.374 0.85 25.88 16682 -- --
19.17 0.204 8.85 0.919 0.144 -0.0266 -- -0.92 -0.291 0.19 24.99 3670 -- --
19.42 0.205 8.89 0.595 0.152 -0.118 -- -- -0.398 0.217 29.9 47520 -- --
20.29 0.211 8.86 0.832 -- 0.0656 -- -0.409 -0.283 -- 24.99 3670 -- --
19.7 0.208 8.88 0.688 0.15 -- -0.234 -- -0.351 0.192 -- -- -- --
19.93 0.209 8.88 0.697 0.151 -- -- -- -0.35 0.145 -- -- -- --
20.6 0.211 8.89 0.532 -- -0.17 -- -- -0.406 -- 33.13 47520 -- --
22.46 0.221 8.94 -- 0.139 -0.464 -- -- -0.614 0.139 26.9 47520 -- --
21.37 0.216 8.88 0.702 -- -- -- -- -0.348 -- -- -- -- --
32.74 0.268 8.9 -- 0.161 -- -- -- -0.428 0.383 -- -- -- --
23.47 0.226 8.94 -- -- -0.48 -- -- -0.615 -- 26.21 47520 -- --
34.37 0.274 8.9 -- -- -- -- -- -0.426 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.00 temperature 25.0 720 > th dose dependent rect. 16 5
2 18.00 temperature 25.0 720 > th dose dependent rect. 16 10
18 18.12 temperature 25.0 720 > th dose independent rect. 18 2
42 18.19 atmosphere 995.0 10 > th dose dependent rect. 24 8
50 18.22 atmosphere 1000.0 10 > th dose independent rect. 24 8
51 18.22 temperature 25.0 720 > th dose dependent sin 13 NA
68 18.36 wind 1.0 14400 > th dose independent rect. 9 3
70 18.36 temperature 20.0 10 > th dose dependent rect. 16 15
71 18.37 temperature 20.0 10 > th dose dependent sin 12 NA
88 18.40 temperature 25.0 720 < th dose independent rect. 17 4
106 18.44 wind 1.0 14400 < th dose independent rect. 9 3
112 18.45 temperature 25.0 4320 < th dose independent rect. 1 4
124 18.46 atmosphere 1000.0 10 > th dose independent rect. 15 17
130 18.47 temperature 15.0 10 > th dose independent rect. 8 16
133 18.47 wind 3.0 14400 < th dose dependent rect. 7 5
159 18.51 wind 1.0 43200 > th dose independent rect. 7 1
167 18.52 wind 1.0 43200 < th dose independent rect. 7 1
171 18.52 wind 7.0 30 < th dose independent rect. 8 16
178 18.53 atmosphere 1000.0 720 < th dose independent rect. 18 5
180 18.53 atmosphere 1000.0 270 > th dose independent rect. 22 8
186 18.53 temperature 20.0 1440 > th dose dependent rect. 3 1
190 18.54 atmosphere 1000.0 720 < th dose independent rect. 21 1
192 18.54 atmosphere 1000.0 720 < th dose independent rect. 17 7
195 18.54 atmosphere 1000.0 10 < th dose independent rect. 21 11
209 18.55 temperature 25.0 4320 > th dose independent rect. 24 1
214 18.55 atmosphere 1005.0 720 < th dose dependent rect. 21 1
216 18.55 wind 1.0 14400 < th dose dependent rect. 9 3
230 18.56 temperature 25.0 4320 > th dose independent rect. 22 7
240 18.56 temperature 25.0 4320 > th dose dependent rect. 24 1
256 18.57 temperature 25.0 4320 > th dose independent rect. 24 5
264 18.57 wind 3.0 14400 < th dose dependent rect. 8 1
268 18.57 temperature 20.0 90 > th dose dependent rect. 23 7
283 18.58 atmosphere 1000.0 30 > th dose independent rect. 13 19
284 18.58 radiation 20.0 720 > th dose dependent rect. 16 1
312 18.59 atmosphere 1000.0 720 > th dose independent rect. 17 8
327 18.60 atmosphere 1000.0 720 > th dose independent rect. 15 10
337 18.60 temperature 20.0 270 > th dose dependent rect. 21 7
341 18.61 temperature 25.0 720 > th dose independent sin 14 NA
354 18.61 temperature 25.0 4320 < th dose independent rect. 17 13
377 18.62 atmosphere 1000.0 720 > th dose independent rect. 15 8
379 18.62 atmosphere 1000.0 90 < th dose independent rect. 20 9
392 18.62 temperature 20.0 10 > th dose dependent rect. 24 7
394 18.62 atmosphere 1005.0 10 < th dose dependent rect. 21 12
395 18.62 atmosphere 1005.0 90 < th dose dependent rect. 20 13
398 18.63 atmosphere 1000.0 720 < th dose independent sin 14 NA
405 18.63 atmosphere 1000.0 10 < th dose independent rect. 21 9
417 18.63 radiation 40.0 30 < th dose independent rect. 8 16
419 18.63 radiation 10.0 1440 < th dose dependent rect. 7 2
428 18.64 wind 3.0 43200 < th dose independent rect. 12 1
438 18.64 atmosphere 1005.0 30 > th dose independent rect. 8 7
469 18.64 temperature 10.0 10 > th dose dependent rect. 24 8
473 18.65 atmosphere 1000.0 10 < th dose independent sin 10 NA
492 18.65 atmosphere 1000.0 720 > th dose independent rect. 13 14
494 18.65 atmosphere 1000.0 30 > th dose independent rect. 17 15
525 18.66 wind 7.0 4320 < th dose independent rect. 24 3
529 18.66 atmosphere 1000.0 90 < th dose independent rect. 20 7
530 18.66 atmosphere 1000.0 10 < th dose independent rect. 21 7
546 18.66 radiation 40.0 10 < th dose independent rect. 21 15
547 18.66 atmosphere 1000.0 270 > th dose independent rect. 13 16
562 18.66 temperature 20.0 10 > th dose dependent rect. 13 18
563 18.67 temperature 25.0 4320 < th dose independent sin 11 NA
566 18.67 wind 7.0 4320 < th dose independent rect. 24 1
581 18.67 atmosphere 1000.0 720 > th dose independent rect. 15 12
582 18.67 temperature 25.0 4320 > th dose independent rect. 17 13
584 18.67 atmosphere 1000.0 720 > th dose independent rect. 15 15
603 18.68 atmosphere 1000.0 10 > th dose independent sin 11 NA
605 18.68 atmosphere 1000.0 720 > th dose independent sin 15 NA
608 18.68 wind 5.0 4320 > th dose independent rect. 1 1
609 18.68 temperature 25.0 1440 < th dose independent rect. 20 1
611 18.68 wind 1.0 14400 < th dose independent rect. 1 3
633 18.68 humidity 50.0 10 > th dose independent rect. 8 16
651 18.68 atmosphere 995.0 10 > th dose dependent rect. 15 17
685 18.69 wind 5.0 4320 > th dose dependent rect. 1 1
693 18.69 atmosphere 995.0 270 > th dose dependent rect. 22 8
695 18.69 atmosphere 995.0 4320 < th dose dependent rect. 18 9
697 18.69 temperature 20.0 10 > th dose dependent rect. 21 10
718 18.70 wind 7.0 4320 > th dose independent rect. 24 3
719 18.70 humidity 70.0 4320 > th dose independent rect. 22 3
721 18.70 wind 5.0 270 < th dose independent rect. 6 5
722 18.70 wind 5.0 30 < th dose independent rect. 8 5
726 18.70 wind 7.0 4320 < th dose independent rect. 21 7
767 18.70 wind 7.0 4320 > th dose dependent rect. 24 3
789 18.71 wind 1.0 43200 > th dose independent rect. 11 1
790 18.71 wind 1.0 4320 < th dose independent rect. 6 2
817 18.71 precipitation 0.1 30 < th dose independent rect. 8 16
822 18.71 wind 3.0 43200 < th dose dependent rect. 11 2
836 18.71 atmosphere 1005.0 90 < th dose dependent rect. 20 5
840 18.71 wind 5.0 4320 > th dose dependent rect. 21 7
843 18.71 atmosphere 1005.0 90 < th dose dependent rect. 20 7
846 18.71 temperature 20.0 10 > th dose dependent rect. 21 8
858 18.71 temperature 10.0 10 > th dose dependent rect. 8 16
860 18.71 precipitation 0.1 30 < th dose dependent rect. 8 16
865 18.72 temperature 25.0 4320 > th dose independent sin 11 NA
873 18.72 wind 1.0 14400 > th dose independent rect. 1 3
907 18.72 atmosphere 995.0 10 > th dose independent rect. 8 16
911 18.72 atmosphere 1000.0 90 < th dose independent rect. 20 18
979 18.73 wind 1.0 30 > th dose independent rect. 8 16
983 18.73 atmosphere 1000.0 720 > th dose independent rect. 11 16