FiT-DB / Search/ Help/ Sample detail

Os03g0748000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : YT521-B-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0206) R2 : 0.631
β1 : 1.01 (0.0756) R2dD : 0.149 R2D : 0.124
β2 : 1.27 (0.051) R2dC : 0.503 R2C : 0.486
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.115 (0.0441) R2dN8 : 0.00742 R2N8 : -0.00805
σ : 0.388
deviance : 68.72
__
_____
C
peak time of C : 14.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.76 0.341 13.6 0.33 1.19 0.0278 -0.543 -5.15 0.0152 14.8 30.97 1174 -- --
53.43 0.34 13.5 1.16 1.19 -0.568 -0.554 -- 0.0506 14.8 28.41 1214 -- --
53.74 0.341 13.6 0.348 1.19 0.0149 -- -4.95 0.0146 14.9 31 1171 -- --
54.05 0.342 13.5 1.17 1.18 -0.595 -- -- 0.11 15 27.21 1199 -- --
133.42 0.538 13.6 0.413 -- -0.22 -- -4.63 -0.0408 -- 31.2 1160 -- --
68.24 0.387 13.5 1.02 1.27 -- -0.378 -- 0.117 14.8 -- -- -- --
68.72 0.388 13.5 1.01 1.27 -- -- -- 0.115 14.8 -- -- -- --
128.59 0.528 13.5 1.25 -- -0.984 -- -- 0.219 -- 24.6 1164 -- --
87.87 0.437 13.6 -- 1.2 -0.39 -- -- -0.0775 14.9 31.9 1164 -- --
162.39 0.595 13.5 0.954 -- -- -- -- 0.0828 -- -- -- -- --
95.52 0.457 13.6 -- 1.25 -- -- -- 0.00302 14.8 -- -- -- --
151.62 0.575 13.6 -- -- 1.17 -- -- -0.108 -- 24.6 1164 -- --
186.4 0.637 13.6 -- -- -- -- -- -0.0231 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.05 humidity 50.0 90 > th dose dependent rect. 19 8
3 49.32 radiation 1.0 270 < th dose dependent rect. 5 21
4 49.67 temperature 15.0 270 > th dose independent rect. 14 16
6 49.83 wind 5.0 270 < th dose independent rect. 1 6
8 49.87 precipitation 0.1 90 < th dose independent rect. 3 16
9 49.87 precipitation 0.1 90 < th dose dependent rect. 3 16
10 49.88 precipitation 0.1 270 < th dose independent rect. 14 16
11 49.88 precipitation 0.1 270 < th dose dependent rect. 14 16
14 50.08 atmosphere 1000.0 90 > th dose independent rect. 19 8
19 50.17 temperature 10.0 270 > th dose dependent rect. 14 16
28 50.35 radiation 1.0 270 < th dose dependent rect. 17 9
30 50.41 radiation 1.0 270 < th dose dependent rect. 15 11
31 50.42 radiation 1.0 270 < th dose dependent rect. 13 13
37 50.45 precipitation 0.1 270 < th dose independent rect. 1 6
38 50.45 precipitation 0.1 270 < th dose dependent rect. 1 6
39 50.47 wind 7.0 90 < th dose dependent rect. 3 6
43 50.53 radiation 1.0 270 < th dose independent rect. 17 9
44 50.53 wind 9.0 270 < th dose dependent rect. 1 6
47 50.61 radiation 1.0 270 < th dose independent rect. 5 21
53 50.72 wind 7.0 10 < th dose dependent rect. 3 6
69 50.92 precipitation 0.1 270 < th dose independent rect. 24 8
71 50.92 precipitation 0.1 270 < th dose dependent rect. 24 8
90 50.99 wind 9.0 90 < th dose independent rect. 19 8
96 51.01 temperature 10.0 90 > th dose independent rect. 19 8
97 51.01 temperature 30.0 90 < th dose independent rect. 19 8
98 51.01 humidity 50.0 90 > th dose independent rect. 19 8
101 51.01 radiation 1.0 90 < th dose independent rect. 19 8
106 51.01 temperature 10.0 90 > th dose independent rect. 3 16
107 51.01 atmosphere 1015.0 90 < th dose independent rect. 3 16
108 51.01 atmosphere 995.0 90 > th dose dependent rect. 19 8
109 51.01 radiation 1.0 90 < th dose dependent rect. 19 8
125 51.09 radiation 40.0 270 < th dose dependent rect. 1 8
129 51.12 wind 9.0 270 < th dose independent rect. 7 18
131 51.13 wind 5.0 90 < th dose independent rect. 3 6
133 51.14 precipitation 0.1 90 < th dose independent rect. 3 6
135 51.14 precipitation 0.1 90 < th dose dependent rect. 3 6
139 51.18 radiation 20.0 270 < th dose independent rect. 1 7
140 51.19 humidity 70.0 270 > th dose independent rect. 1 6
143 51.21 precipitation 0.1 270 < th dose independent rect. 3 2
144 51.21 radiation 20.0 90 < th dose independent rect. 3 6
146 51.21 precipitation 0.1 270 < th dose dependent rect. 3 2
149 51.25 temperature 10.0 270 > th dose independent rect. 1 6
151 51.25 temperature 30.0 270 < th dose independent rect. 1 6
152 51.25 humidity 50.0 270 > th dose independent rect. 1 6
154 51.25 atmosphere 995.0 270 > th dose independent rect. 1 6
155 51.25 atmosphere 1015.0 270 < th dose independent rect. 1 6
157 51.25 temperature 10.0 270 > th dose independent rect. 7 18
163 51.29 wind 9.0 90 < th dose independent rect. 3 16
165 51.30 wind 9.0 270 < th dose independent rect. 6 8
168 51.32 temperature 10.0 270 > th dose independent rect. 6 8
169 51.32 atmosphere 995.0 270 > th dose independent rect. 6 8
170 51.32 atmosphere 1015.0 270 < th dose independent rect. 6 8
180 51.35 precipitation 0.1 90 < th dose independent rect. 19 8
181 51.35 temperature 10.0 270 > th dose dependent rect. 1 6
182 51.35 precipitation 0.1 90 < th dose dependent rect. 19 8
183 51.36 precipitation 0.1 270 < th dose independent rect. 6 8
185 51.36 precipitation 0.1 270 < th dose dependent rect. 6 8
212 51.49 radiation 40.0 90 < th dose dependent rect. 3 6
215 51.51 humidity 70.0 90 > th dose independent rect. 3 6
218 51.52 humidity 70.0 270 > th dose independent rect. 24 8
222 51.53 wind 5.0 270 < th dose independent rect. 3 2
225 51.54 precipitation 0.1 10 < th dose independent rect. 3 6
227 51.54 precipitation 0.1 10 < th dose dependent rect. 3 6
234 51.55 wind 9.0 270 < th dose independent rect. 14 16
255 51.63 wind 7.0 270 < th dose dependent rect. 3 2
258 51.65 humidity 50.0 270 > th dose independent rect. 6 8
260 51.67 wind 9.0 270 < th dose independent rect. 8 16
281 51.74 atmosphere 995.0 270 > th dose independent rect. 7 18
285 51.76 temperature 10.0 270 > th dose dependent rect. 13 8
289 51.78 temperature 15.0 270 > th dose independent rect. 24 8
290 51.78 atmosphere 1015.0 270 < th dose independent rect. 24 8
293 51.79 temperature 30.0 90 < th dose independent rect. 3 6
297 51.79 temperature 30.0 270 < th dose independent rect. 24 8
298 51.79 humidity 50.0 270 > th dose independent rect. 24 8
300 51.79 atmosphere 995.0 270 > th dose independent rect. 24 8
302 51.79 temperature 10.0 270 > th dose independent rect. 8 16
337 51.86 temperature 10.0 90 > th dose independent rect. 3 6
340 51.86 atmosphere 995.0 90 > th dose independent rect. 3 6
341 51.86 atmosphere 1015.0 90 < th dose independent rect. 3 6
365 51.94 humidity 50.0 90 > th dose dependent rect. 3 6
367 51.95 radiation 40.0 270 < th dose independent rect. 14 16
390 52.05 temperature 15.0 270 > th dose independent rect. 5 22
409 52.12 wind 5.0 10 < th dose independent rect. 3 6
429 52.16 temperature 10.0 90 > th dose dependent rect. 3 5
463 52.28 wind 9.0 270 < th dose independent rect. 5 22
470 52.30 humidity 50.0 270 > th dose dependent rect. 1 6
476 52.33 temperature 30.0 720 < th dose independent rect. 17 2
498 52.35 wind 9.0 90 < th dose dependent rect. 19 8
507 52.38 temperature 10.0 270 > th dose dependent rect. 3 2
508 52.38 radiation 1.0 270 < th dose dependent rect. 3 2
515 52.42 temperature 10.0 270 > th dose independent rect. 3 2
517 52.42 temperature 30.0 270 < th dose independent rect. 3 2
518 52.42 humidity 50.0 270 > th dose independent rect. 3 2
521 52.42 atmosphere 995.0 270 > th dose independent rect. 3 2
522 52.42 atmosphere 1010.0 270 < th dose independent rect. 3 2
524 52.42 radiation 20.0 270 < th dose independent rect. 3 2
528 52.42 radiation 30.0 270 < th dose dependent rect. 3 2
534 52.43 radiation 1.0 270 < th dose independent rect. 3 2
639 52.67 wind 9.0 10 < th dose independent rect. 9 18
642 52.68 precipitation 0.1 270 < th dose independent rect. 7 18
643 52.68 precipitation 0.1 270 < th dose dependent rect. 7 18
659 52.72 atmosphere 1015.0 270 < th dose independent rect. 14 16
662 52.72 temperature 30.0 90 < th dose dependent rect. 19 8
682 52.76 humidity 50.0 270 > th dose dependent rect. 3 2
743 52.82 radiation 40.0 10 < th dose independent rect. 3 6
744 52.82 atmosphere 995.0 90 > th dose independent rect. 3 16
745 52.82 radiation 1.0 270 < th dose dependent sin 16 NA
756 52.84 humidity 50.0 90 > th dose dependent rect. 3 8
763 52.86 temperature 10.0 10 > th dose dependent rect. 3 6
766 52.87 temperature 10.0 10 > th dose independent rect. 3 6
768 52.87 temperature 30.0 10 < th dose independent rect. 3 6
769 52.87 humidity 50.0 10 > th dose independent rect. 3 6
771 52.87 atmosphere 995.0 10 > th dose independent rect. 3 6
772 52.87 atmosphere 1015.0 10 < th dose independent rect. 3 6
774 52.87 temperature 10.0 10 > th dose independent rect. 9 18
780 52.88 atmosphere 1000.0 10 > th dose independent rect. 20 8
788 52.90 wind 1.0 270 > th dose independent rect. 6 8
795 52.91 wind 9.0 90 < th dose dependent rect. 3 16
885 53.08 humidity 70.0 720 > th dose independent rect. 17 3
892 53.08 precipitation 0.1 90 < th dose independent rect. 9 18
895 53.08 precipitation 0.1 90 < th dose dependent rect. 9 18
925 53.13 wind 1.0 270 > th dose independent rect. 3 1
944 53.17 atmosphere 1015.0 270 < th dose dependent rect. 3 2
951 53.19 atmosphere 1015.0 1440 < th dose independent rect. 3 7
996 53.25 wind 1.0 270 > th dose independent rect. 14 15