Os03g0317000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to High-glucose-regulated protein 8-like.
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Os03g0317000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to High-glucose-regulated protein 8-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.61 | 0.341 | 10.4 | 0.316 | 1.05 | -0.0491 | -0.436 | 3.09 | -0.215 | 3.29 | 19.65 | 3044 | -- | -- |
| 57.66 | 0.354 | 10.5 | -0.957 | 1.07 | 0.409 | -0.306 | -- | -0.586 | 3.29 | 32.4 | 47520 | -- | -- |
| 53.18 | 0.34 | 10.4 | 0.289 | 1.05 | -0.0309 | -- | 3.05 | -0.222 | 3.33 | 19.32 | 3118 | -- | -- |
| 58.05 | 0.355 | 10.5 | -0.948 | 1.06 | 0.389 | -- | -- | -0.586 | 3.37 | 32.32 | 47520 | -- | -- |
| 98.48 | 0.465 | 10.4 | 0.0209 | -- | -1.1 | -- | 2.37 | -0.175 | -- | 22.51 | 2773 | -- | -- |
| 61.43 | 0.367 | 10.5 | -0.57 | 1.06 | -- | -0.367 | -- | -0.454 | 3.32 | -- | -- | -- | -- |
| 61.86 | 0.368 | 10.5 | -0.563 | 1.06 | -- | -- | -- | -0.452 | 3.35 | -- | -- | -- | -- |
| 102.7 | 0.474 | 10.4 | -0.291 | -- | -1.25 | -- | -- | -0.257 | -- | -23.21 | 16954 | -- | -- |
| 67.86 | 0.384 | 10.5 | -- | 1.05 | -0.174 | -- | -- | -0.434 | 3.3 | 35.7 | 47520 | -- | -- |
| 125.26 | 0.523 | 10.5 | -0.518 | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
| 70.22 | 0.392 | 10.5 | -- | 1.05 | -- | -- | -- | -0.389 | 3.35 | -- | -- | -- | -- |
| 104.8 | 0.478 | 10.4 | -- | -- | -1.34 | -- | -- | -0.215 | -- | -23.21 | 16954 | -- | -- |
| 132.34 | 0.537 | 10.5 | -- | -- | -- | -- | -- | -0.366 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 4 | 52.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 6 | 52.66 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 7 | 52.66 | radiation | 20 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 11 | 52.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 18 | 52.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 21 | 52.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 30 | 52.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 36 | 52.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 41 | 53.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 42 | 53.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 47 | 53.02 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 61 | 53.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 63 | 53.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 18 |
| 64 | 53.09 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 80 | 53.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 85 | 53.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 86 | 53.14 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 105 | 53.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 107 | 53.23 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 186 | 53.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 197 | 53.37 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 233 | 53.42 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 243 | 53.42 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 20 |
| 247 | 53.43 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 305 | 53.47 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 312 | 53.47 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 20 |
| 344 | 53.50 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 20 |
| 384 | 53.52 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 457 | 53.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 499 | 53.59 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 13 |
| 510 | 53.60 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 540 | 53.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 544 | 53.62 | temperature | 15 | 4320 | > th | dose dependent | sin | 9 | NA |
| 561 | 53.63 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 738 | 53.70 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 13 |
| 876 | 53.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 16 |
| 877 | 53.74 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 879 | 53.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 906 | 53.75 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 907 | 53.75 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 908 | 53.75 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 9 |
| 960 | 53.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 9 |