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Os03g0158500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : YT521-B-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.8 (0.0203) R2 : 0.752
β1 : 1.92 (0.0742) R2dD : 0.378 R2D : 0.147
β2 : 0.751 (0.0481) R2dC : 0.134 R2C : 0.04
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.1 (0.0433) R2dN8 : 0.476 R2N8 : 0.232
σ : 0.381
deviance : 66.24
__
_____
C
peak time of C : 0.229
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.31 0.356 14.7 1.95 0.764 -0.833 0.385 -0.125 1.15 0.381 79.87 1406 -- --
57.32 0.353 14.7 1.96 0.763 -0.839 0.385 -- 1.16 0.379 79.88 1405 -- --
57.94 0.355 14.7 1.93 0.764 -0.82 -- -0.132 1.15 0.376 79.81 1404 -- --
57.96 0.355 14.7 1.94 0.762 -0.827 -- -- 1.15 0.372 79.74 1405 -- --
74.29 0.404 14.7 1.95 -- -0.482 -- -0.416 1.12 -- 79.81 1404 -- --
65.83 0.38 14.8 1.93 0.752 -- 0.308 -- 1.11 0.226 -- -- -- --
66.24 0.381 14.8 1.92 0.751 -- -- -- 1.1 0.229 -- -- -- --
74.92 0.405 14.7 1.96 -- -0.485 -- -- 1.11 -- 81 1619 -- --
146.97 0.565 14.7 -- 0.732 -0.912 -- -- 1.25 0.191 81 7347 -- --
101.77 0.471 14.7 1.94 -- -- -- -- 1.12 -- -- -- -- --
163.29 0.598 14.8 -- 0.779 -- -- -- 0.891 0.361 -- -- -- --
173.19 0.615 14.8 -- -- -0.496 -- -- 0.891 -- 81 7347 -- --
201.4 0.662 14.8 -- -- -- -- -- 0.901 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.59 humidity 70.0 1440 > th dose dependent rect. 11 1
3 54.81 humidity 80.0 1440 < th dose independent rect. 11 2
5 55.03 humidity 80.0 1440 > th dose independent rect. 11 1
9 55.51 humidity 80.0 1440 > th dose independent rect. 10 4
16 56.14 precipitation 0.1 14400 > th dose independent rect. 12 5
17 56.17 precipitation 0.1 14400 < th dose independent rect. 12 5
18 56.17 precipitation 0.1 14400 < th dose dependent rect. 12 5
19 56.19 precipitation 0.1 14400 > th dose dependent rect. 9 8
20 56.19 precipitation 0.1 4320 > th dose dependent rect. 24 17
21 56.21 precipitation 0.1 14400 < th dose independent rect. 9 8
22 56.21 precipitation 0.1 14400 < th dose dependent rect. 9 8
23 56.22 precipitation 0.1 14400 > th dose independent rect. 9 8
26 56.25 wind 1.0 14400 > th dose independent rect. 1 4
30 56.26 precipitation 0.1 14400 > th dose dependent rect. 7 10
32 56.27 precipitation 0.1 14400 > th dose dependent rect. 12 5
34 56.29 wind 1.0 14400 > th dose independent rect. 4 2
47 56.39 wind 1.0 14400 < th dose independent rect. 1 4
53 56.46 humidity 80.0 1440 < th dose independent rect. 21 18
56 56.49 precipitation 0.1 14400 > th dose independent rect. 7 10
57 56.49 precipitation 0.1 14400 < th dose independent rect. 7 10
58 56.49 precipitation 0.1 14400 < th dose dependent rect. 7 10
63 56.52 wind 1.0 14400 < th dose independent rect. 4 2
66 56.52 humidity 80.0 1440 > th dose independent rect. 22 18
77 56.60 precipitation 0.1 14400 > th dose independent rect. 15 1
78 56.60 precipitation 0.1 14400 > th dose dependent rect. 15 1
87 56.65 precipitation 0.1 14400 > th dose dependent rect. 18 1
88 56.66 precipitation 0.1 14400 < th dose independent rect. 15 1
90 56.66 precipitation 0.1 14400 < th dose dependent rect. 15 1
97 56.70 precipitation 0.1 4320 > th dose independent rect. 24 17
98 56.70 precipitation 0.1 4320 < th dose independent rect. 24 17
99 56.70 precipitation 0.1 4320 < th dose dependent rect. 24 17
142 56.90 precipitation 0.1 4320 > th dose dependent rect. 24 14
172 57.00 wind 3.0 14400 < th dose dependent rect. 2 4
180 57.03 humidity 70.0 1440 > th dose dependent rect. 1 14
181 57.04 precipitation 0.1 14400 > th dose independent rect. 18 1
190 57.05 wind 1.0 4320 > th dose independent rect. 17 2
193 57.05 wind 3.0 43200 < th dose dependent rect. 5 1
197 57.07 precipitation 0.1 14400 < th dose independent rect. 18 1
201 57.07 precipitation 0.1 14400 < th dose dependent rect. 18 1
204 57.08 humidity 80.0 1440 < th dose independent sin 2 NA
235 57.13 humidity 80.0 1440 > th dose independent sin 2 NA
243 57.15 precipitation 0.1 14400 > th dose independent rect. 3 17
247 57.16 precipitation 0.1 14400 < th dose independent rect. 3 17
249 57.16 precipitation 0.1 14400 < th dose dependent rect. 3 17
279 57.23 humidity 70.0 1440 > th dose dependent rect. 20 19
292 57.25 wind 3.0 14400 < th dose dependent rect. 23 6
330 57.31 precipitation 0.1 14400 > th dose independent rect. 7 13
335 57.31 humidity 70.0 1440 > th dose dependent rect. 23 20
337 57.32 precipitation 0.1 14400 < th dose independent rect. 7 13
341 57.32 humidity 80.0 1440 < th dose independent rect. 8 20
342 57.32 precipitation 0.1 14400 < th dose dependent rect. 7 13
350 57.33 humidity 80.0 1440 < th dose independent rect. 8 23
400 57.38 precipitation 0.1 14400 > th dose independent rect. 9 11
401 57.38 precipitation 0.1 14400 < th dose independent rect. 9 11
407 57.38 precipitation 0.1 14400 < th dose dependent rect. 9 11
415 57.39 humidity 80.0 1440 > th dose independent rect. 9 23
425 57.41 humidity 80.0 1440 < th dose independent no NA NA
442 57.43 precipitation 0.1 14400 > th dose independent sin 1 NA
443 57.43 precipitation 0.1 14400 < th dose independent sin 1 NA
446 57.43 precipitation 0.1 14400 > th dose independent rect. 12 8
452 57.43 precipitation 0.1 14400 < th dose dependent sin 1 NA
457 57.44 precipitation 0.1 14400 < th dose independent rect. 12 8
463 57.44 precipitation 0.1 14400 < th dose dependent rect. 12 8
467 57.45 wind 1.0 43200 > th dose independent rect. 1 8
470 57.45 humidity 80.0 1440 < th dose independent rect. 1 23
473 57.45 humidity 70.0 1440 > th dose dependent sin 2 NA
486 57.46 precipitation 0.1 4320 > th dose dependent rect. 18 23
499 57.48 humidity 80.0 1440 > th dose independent rect. 9 19
509 57.48 humidity 70.0 1440 > th dose dependent rect. 8 22
520 57.49 humidity 80.0 1440 > th dose independent rect. 6 22
529 57.50 humidity 80.0 1440 > th dose independent no NA NA
572 57.53 humidity 80.0 1440 > th dose independent rect. 1 23
582 57.54 precipitation 0.1 4320 > th dose dependent sin 4 NA
655 57.61 wind 3.0 14400 < th dose dependent rect. 2 1
662 57.62 precipitation 0.1 14400 > th dose dependent sin 2 NA
693 57.65 humidity 80.0 1440 > th dose independent rect. 13 23
702 57.66 humidity 70.0 1440 > th dose dependent no NA NA
716 57.67 precipitation 0.1 14400 > th dose dependent rect. 3 17
719 57.67 precipitation 0.1 14400 > th dose dependent rect. 1 19
722 57.68 wind 1.0 43200 < th dose independent rect. 1 8
723 57.68 precipitation 0.1 4320 < th dose independent rect. 24 14
731 57.68 precipitation 0.1 4320 < th dose dependent rect. 24 14
739 57.69 precipitation 0.1 4320 > th dose independent rect. 24 14
750 57.70 wind 1.0 4320 < th dose independent rect. 18 1
759 57.70 humidity 70.0 1440 > th dose dependent rect. 5 23
781 57.73 wind 9.0 14400 < th dose independent rect. 10 1
796 57.74 precipitation 0.1 4320 > th dose independent rect. 3 11
817 57.75 precipitation 0.1 4320 < th dose independent rect. 3 11
823 57.75 precipitation 0.1 4320 < th dose dependent rect. 3 11
878 57.80 precipitation 0.1 4320 > th dose dependent rect. 3 7
931 57.84 humidity 90.0 720 > th dose dependent rect. 7 19
935 57.84 humidity 70.0 1440 > th dose dependent rect. 13 23
999 57.88 precipitation 0.1 4320 > th dose dependent rect. 3 2