BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0158500 Os03g0158500|AK111578
(707 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13460.1 | chr3:4385274-4388220 REVERSE LENGTH=668 394 e-109
AT1G55500.2 | chr1:20719747-20722416 FORWARD LENGTH=600 362 e-100
AT5G61020.1 | chr5:24557485-24559780 REVERSE LENGTH=496 301 9e-82
AT3G17330.1 | chr3:5917253-5919458 REVERSE LENGTH=596 284 1e-76
AT3G03950.3 | chr3:1021502-1023767 FORWARD LENGTH=429 280 2e-75
AT1G79270.1 | chr1:29816157-29818811 FORWARD LENGTH=529 278 6e-75
AT1G48110.1 | chr1:17770339-17772806 REVERSE LENGTH=640 278 1e-74
AT3G13060.2 | chr3:4180625-4183632 FORWARD LENGTH=635 277 1e-74
AT5G58190.2 | chr5:23546434-23549363 FORWARD LENGTH=529 259 4e-69
AT1G27960.1 | chr1:9742359-9745648 REVERSE LENGTH=540 253 3e-67
AT1G09810.1 | chr1:3181138-3183354 REVERSE LENGTH=471 241 7e-64
AT4G11970.1 | chr4:7181223-7182953 FORWARD LENGTH=445 73 6e-13
AT1G30460.1 | chr1:10771469-10775323 REVERSE LENGTH=632 69 1e-11
>AT3G13460.1 | chr3:4385274-4388220 REVERSE LENGTH=668
Length = 667
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 261/612 (42%), Positives = 331/612 (54%), Gaps = 43/612 (7%)
Query: 38 DQTTDLLQKLSLDSQPKAVDAATEPAGAKKGPAASQPLSV----AIPP-ERSITPVL-QD 91
DQ TDLLQKLSLDS KA + EP K A Q V +P +RS+TP+L D
Sbjct: 9 DQATDLLQKLSLDSPAKASEIP-EP---NKKTAVYQYGGVDVHGQVPSYDRSLTPMLPSD 64
Query: 92 FMDPNMFYLP----AYYYGGYDGSVSEWDDYPRYVNPDGVEITPAVY---GDIXXXXXXX 144
DP++ Y+P Y Y GS EW DYP Y NP+GV++ +Y G +
Sbjct: 65 AADPSVCYVPNPYNPYQYYNVYGSGQEWTDYPAYTNPEGVDMNSGIYGENGTVVYPQGYG 124
Query: 145 XXXXXXXXXXVPTV----DGQMFGXXXXXXXXXXXXXXXXXXXXXGDLQPSXXXXXXXXX 200
P +GQ++G QP
Sbjct: 125 YAAYPYSPATSPAPQLGGEGQLYGAQQYQYPNYFPNSGPYASSVATPTQPDLSANKPAGV 184
Query: 201 XXX-XXXXXXGAPNGTVHSNSGTVPLGSSQQNSSLTPDGTYRAPLLGGVPSAGYLDSTYG 259
+ G ++G+ P+ + Q + T Y GG +AGY D Y
Sbjct: 185 KTLPADSNNVASAAGITKGSNGSAPVKPTNQATLNTSSNLYGMGAPGGGLAAGYQDPRYA 244
Query: 260 YDSTGAHFAWYDGSAYTNGQQRTTTTNHMSS-STFSNGSSARTQNKGSTPQQMGMNNRRP 318
Y+ A W+DGS Y++ Q+ + + SS S S S+R QN S ++ +P
Sbjct: 245 YEGYYAPVPWHDGSKYSDVQRPVSGSGVASSYSKSSTVPSSRNQNYRSNSHYTSVH--QP 302
Query: 319 TTTTG-SAAPTYPNRMYPSTRSYSQYGNSYKTGLXXXXXXXXXXXXXXXXXDSRLYGRWG 377
++ TG A Y NRMY + Y QYG++ ++ L DSR GR
Sbjct: 303 SSVTGYGTAQGYYNRMY-QNKLYGQYGSTGRSALGYGSSGY----------DSRTNGRGW 351
Query: 378 LSMDNRYKPXXXXXXXXXXXXESQDGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQS--- 434
+ DN+Y+ + DG ELNRGPR+ KNQK ++ VK Q+
Sbjct: 352 AATDNKYRSWGRGNSYYYGNENNVDGLNELNRGPRAKGTKNQK-GNLDDSLEVKEQTGES 410
Query: 435 --LPTSDSMNATDVPDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNG 492
++ N VPDR Q+N++DFPV Y +A FF+IKSYSEDD+HKSIKYNVWAST NG
Sbjct: 411 NVTEVGEADNTCVVPDREQYNKEDFPVDYANAMFFIIKSYSEDDVHKSIKYNVWASTPNG 470
Query: 493 NKKLDAAYQEAQAKSSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSL 552
NKKL AAYQEAQ K+ CPIFLFFSVN SGQFVG+AEMTG VDF +EYWQQDKW GS
Sbjct: 471 NKKLAAAYQEAQQKAGGCPIFLFFSVNASGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSF 530
Query: 553 SLKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILD 612
LKWHIVKDVPN++LKHI LENNENKPVTNSRDTQEV L+QG++++KIFKEH SKT ILD
Sbjct: 531 PLKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEVKLEQGLKIVKIFKEHSSKTCILD 590
Query: 613 DFAFYENRQKLM 624
DF+FYE RQK +
Sbjct: 591 DFSFYEVRQKTI 602
>AT1G55500.2 | chr1:20719747-20722416 FORWARD LENGTH=600
Length = 599
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 260/416 (62%), Gaps = 19/416 (4%)
Query: 213 NGTVHSNSGTVPLG--SSQQNSSLTPDGTYRAPLLGGVPSAGYLDSTYGYDSTGAHFAWY 270
N +S S +P G S L Y LGG +AGY D Y YD +W+
Sbjct: 174 NKAANSASAGIPKGMNGSAPVKPLNQSALYGNSALGGGLAAGYQDPRYSYDGFYTPVSWH 233
Query: 271 DGSAYTNGQQRTTTTNHMSSSTFSNGSSARTQNKGSTPQQMGMNNRRPTTTTGSAAPTYP 330
DGS +++ Q+ + + SS + +N + T+N+ S+ + +P + TG AA Y
Sbjct: 234 DGSNFSDVQRSVSGSGVASSYSKANNNVPATRNQNSSSNSHYTSMYQPASMTGYAAQGYY 293
Query: 331 NRMYPSTRSYSQYGNSYKTGLXXXXXXXXXXXXXXXXXDSRLYGRWGLSMDNRYKPXXXX 390
+R+ P+ +SY QYG++ ++ SR R L+ DN+Y+
Sbjct: 294 DRVSPN-KSYGQYGSTVRS----------GMGYGSSGYGSRTNERGWLNTDNKYR-SRGR 341
Query: 391 XXXXXXXXESQDGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATD--VPD 448
E+ DG ELNRGPR+ K K + VK Q+ S++ +PD
Sbjct: 342 GNSYFYGNENIDGLNELNRGPRA---KGTKATEEVSSEEVKKQTFDESNTEETVTCVLPD 398
Query: 449 RTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSS 508
R + NRDDFPV+Y DAKFF+IKSYSEDD+HKSIKYNVWAST NGNKKLDAAYQEAQ KSS
Sbjct: 399 REECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQKSS 458
Query: 509 KCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNILK 568
CP+FLFFSVN SGQF+G+AEM G VDF K +EYWQQDKW GS LKWHI+KDVPN++LK
Sbjct: 459 GCPVFLFFSVNASGQFIGLAEMKGPVDFNKNIEYWQQDKWTGSFPLKWHILKDVPNSLLK 518
Query: 569 HIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLM 624
HI LE NENKPVTNSRDTQEV L+QG++++KIFKEH SKT ILDDF+FYE RQK +
Sbjct: 519 HITLEYNENKPVTNSRDTQEVKLEQGLKVVKIFKEHNSKTCILDDFSFYEARQKTI 574
>AT5G61020.1 | chr5:24557485-24559780 REVERSE LENGTH=496
Length = 495
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/247 (58%), Positives = 184/247 (74%), Gaps = 5/247 (2%)
Query: 379 SMDNRYKPXXXXXXXXXXXXESQDGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTS 438
+++N YKP E+ +G E+NRGPR+ F +Q + +++K Q + +
Sbjct: 179 AVNNTYKPRNGYHGYGK---ENIEGLNEMNRGPRAKGFNSQD-GSKVMAVSLKEQRVTET 234
Query: 439 DSMNA-TDVPDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLD 497
+ ++ + D +N+ DFP Y +AKF+VIKSYSEDDIHKSIKY+VW+ST NGNKKLD
Sbjct: 235 EKLSEDVSLLDPKDYNKIDFPETYTEAKFYVIKSYSEDDIHKSIKYSVWSSTPNGNKKLD 294
Query: 498 AAYQEAQAKSSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWH 557
A+Y EA+ KS CP+FL FSVNTSGQFVG+AEM G VDF KT+EYWQQDKW G +KWH
Sbjct: 295 ASYNEAKQKSDGCPVFLLFSVNTSGQFVGLAEMVGPVDFNKTVEYWQQDKWIGCFPVKWH 354
Query: 558 IVKDVPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFY 617
VKD+PN+ L+HI LENNENKPVTNSRDTQEV L+QGI+++KIFK+H SKT ILDDF FY
Sbjct: 355 FVKDIPNSSLRHITLENNENKPVTNSRDTQEVKLEQGIKVIKIFKDHASKTCILDDFEFY 414
Query: 618 ENRQKLM 624
ENRQK++
Sbjct: 415 ENRQKII 421
>AT3G17330.1 | chr3:5917253-5919458 REVERSE LENGTH=596
Length = 595
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 168/225 (74%), Gaps = 11/225 (4%)
Query: 404 TIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDVPDRTQFNRDDFPVQYDD 463
T E NRG R+ R +NQ + T A + N PDR +N++DF ++Y D
Sbjct: 217 TSEQNRGSRTRRSRNQLIVKAYTTKAGNADA-----EGNIVINPDR--YNKEDFSIEYSD 269
Query: 464 AKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQ----AKSSKCPIFLFFSVN 519
A+FFVIKSYSEDD+HKSIKY VW+ST NGNKKL + Y++AQ KS +CPIFLFFSVN
Sbjct: 270 ARFFVIKSYSEDDVHKSIKYGVWSSTLNGNKKLQSVYEDAQRIATEKSRECPIFLFFSVN 329
Query: 520 TSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNILKHIILENNENKP 579
+SG F GVAEMTG V F++ +++WQQDKW+GS +KWHI+KDVPN+ +HIIL NNENKP
Sbjct: 330 SSGLFCGVAEMTGPVSFDRDMDFWQQDKWSGSFPVKWHIIKDVPNSYFRHIILHNNENKP 389
Query: 580 VTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLM 624
VTNSRDTQE+ L QG+++LK+FK H KTS+LDDF +YE+RQ+LM
Sbjct: 390 VTNSRDTQEIILKQGLEVLKLFKHHAEKTSLLDDFMYYEDRQRLM 434
>AT3G03950.3 | chr3:1021502-1023767 FORWARD LENGTH=429
Length = 428
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 221/425 (52%), Gaps = 75/425 (17%)
Query: 214 GTVHSNSGTVPLGSSQQNSSLTPDGTYRAPLLGG--------------VPSAGYLDSTYG 259
G+ G P G+S S P+ L GG PS GY D +G
Sbjct: 42 GSFQHPYGHAPYGASSHGSERRPNMNAGNLLNGGDSIGSYPWGYIPANYPSGGYPDPRFG 101
Query: 260 YDSTGAHFAWYDGSAYTNGQQRTTTTNHMSSSTFSNGSSARTQNKGSTPQQMGMNNRRPT 319
YD H S+FS+ + + + + Q+G N+
Sbjct: 102 YDRNSNH------------------------SSFSHLMNPHSSQEVPSFDQLGYNDH--- 134
Query: 320 TTTGSAAPTYPNRMYPSTRSYSQYGNSYKTGLXXXXXXXXXXXXXXXXXDSRLYGRWGLS 379
+Y + Y YGN +G DS GR
Sbjct: 135 -------------LYSNHGLYGLYGNVIDSG----------HAYGTFGYDSWKLGRGWYP 171
Query: 380 MDNRYKPXXXXXXXXXXXXESQDGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSD 439
+D Y+ E D EL RGPRS FKN ++ ++ A+K
Sbjct: 172 VDG-YRKTRSFNHGRGYSDEKADRLNELCRGPRSSDFKNPQVLNSSMLDAMK-------Q 223
Query: 440 SMNATDVPDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAA 499
++A D+ ++N ++FP + AKFFVIKSYSEDD+H IKY W+ST GNKKL+AA
Sbjct: 224 DVSAVDL---QRYNGENFPESFVKAKFFVIKSYSEDDVHNCIKYGAWSSTPTGNKKLNAA 280
Query: 500 YQEAQAKSSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIV 559
Y EA+ S +CP++L FSVN SGQFVG+AEM G VDF KT+EYWQQDKW G +KWHI+
Sbjct: 281 YYEAKENSQECPVYLLFSVNASGQFVGLAEMVGPVDFNKTMEYWQQDKWIGCFPVKWHII 340
Query: 560 KDVPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYEN 619
KD+PN++L+HI L NNENKPVTNSRDTQEVNL+ G +++KIFKE++SKT ILDD+ FYE
Sbjct: 341 KDIPNSLLRHITLANNENKPVTNSRDTQEVNLEHGTKIIKIFKEYMSKTCILDDYKFYET 400
Query: 620 RQKLM 624
RQK++
Sbjct: 401 RQKII 405
>AT1G79270.1 | chr1:29816157-29818811 FORWARD LENGTH=529
Length = 528
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 150/183 (81%), Gaps = 4/183 (2%)
Query: 446 VPDRTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQA 505
V R Q+N F +Y++A FFVIKSYSEDDIHKSIKYNVW+ST NGNKKLD+AYQE+Q
Sbjct: 303 VIRRDQYNLPSFQTKYEEAIFFVIKSYSEDDIHKSIKYNVWSSTLNGNKKLDSAYQESQK 362
Query: 506 K----SSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKD 561
K S KCP+FLFFSVN SGQF GVAEM G VD+EK++E+WQQDKW G +KWHI+KD
Sbjct: 363 KAADKSGKCPVFLFFSVNASGQFCGVAEMIGRVDYEKSMEFWQQDKWTGYFPVKWHIIKD 422
Query: 562 VPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQ 621
VPN L+HIILENNENKPVTNSRDTQEV L QG ++L IFK + +KTSILDDF FYENR+
Sbjct: 423 VPNPQLRHIILENNENKPVTNSRDTQEVRLPQGNEVLNIFKNYAAKTSILDDFDFYENRE 482
Query: 622 KLM 624
K+M
Sbjct: 483 KVM 485
>AT1G48110.1 | chr1:17770339-17772806 REVERSE LENGTH=640
Length = 639
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/227 (56%), Positives = 168/227 (74%), Gaps = 11/227 (4%)
Query: 402 DGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDVPDRTQFNRDDFPVQY 461
D E NRG RS NQ + T A + V + +Q+N++D + Y
Sbjct: 266 DTVREQNRGRRSRALGNQLIVKAYTTKAGNADA-------EGNIVINPSQYNKEDLRIDY 318
Query: 462 DDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQ----AKSSKCPIFLFFS 517
+AKFFVIKSYSEDD+HKSIKYNVW+ST +GNKKL +AY++AQ KS +CPIFLFFS
Sbjct: 319 SNAKFFVIKSYSEDDVHKSIKYNVWSSTLHGNKKLQSAYEDAQRIATEKSCECPIFLFFS 378
Query: 518 VNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNILKHIILENNEN 577
VN SG F G+AEMTG V F+K +++WQQDKW+GS +KWHI+KDVPN+ +HIIL+NNEN
Sbjct: 379 VNASGLFCGMAEMTGPVSFDKDMDFWQQDKWSGSFPVKWHIIKDVPNSYFRHIILQNNEN 438
Query: 578 KPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLM 624
KPVTNSRDTQE+ L QG+++LKIFK+H+ +TS+LDDF +YE+RQ++M
Sbjct: 439 KPVTNSRDTQEIMLKQGLEVLKIFKDHMERTSLLDDFVYYESRQRVM 485
>AT3G13060.2 | chr3:4180625-4183632 FORWARD LENGTH=635
Length = 634
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 160/219 (73%), Gaps = 8/219 (3%)
Query: 406 ELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDVPDRTQFNRDDFPVQYDDAK 465
E NRGPR+ + K Q L + S S N + + N DF Y +AK
Sbjct: 348 EQNRGPRASKPKTQVL--------EELDSAADSKKNNKGSAKEHEESNNADFVTDYTNAK 399
Query: 466 FFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKCPIFLFFSVNTSGQFV 525
F+IKSYSED++HKSIKYNVWAST NGNKKLDAAY+EA+ + CP+FL FSVN S QF
Sbjct: 400 LFIIKSYSEDNVHKSIKYNVWASTPNGNKKLDAAYREAKDEKEPCPLFLLFSVNASSQFC 459
Query: 526 GVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNILKHIILENNENKPVTNSRD 585
GVAEM G VDFEK+++YWQQDKW+G +KWHI+KDVPN+ +HIILENN+NKPVTNSRD
Sbjct: 460 GVAEMVGPVDFEKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIILENNDNKPVTNSRD 519
Query: 586 TQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLM 624
TQEV L+QGI+MLKIFK + + TSILDDF FYE R+K++
Sbjct: 520 TQEVKLEQGIEMLKIFKNYDADTSILDDFGFYEEREKII 558
>AT5G58190.2 | chr5:23546434-23549363 FORWARD LENGTH=529
Length = 528
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 157/212 (74%), Gaps = 8/212 (3%)
Query: 408 NRGPR-SGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDVPDRTQFNRDDFPVQYDDAKF 466
NRGPR S R K++ TI S S ++T P+ + +N +F Y +AKF
Sbjct: 275 NRGPRASSRVKSKNSSKPCSTIG-------DSASDSSTAGPNPSLYNHPEFVTDYKNAKF 327
Query: 467 FVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKCPIFLFFSVNTSGQFVG 526
F++KS+SED++H+SIKYNVWAST +GNKKLD AY++A+ KCPIFLFFSVN SGQF G
Sbjct: 328 FIVKSFSEDNVHRSIKYNVWASTPHGNKKLDTAYRDAEKMGGKCPIFLFFSVNASGQFCG 387
Query: 527 VAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNILKHIILENNENKPVTNSRDT 586
V+EM G VDFEK YWQQD+W+G +KWHIVKD+PNN HI+L+NN+NKPVT+SRD+
Sbjct: 388 VSEMVGPVDFEKDAGYWQQDRWSGQFPVKWHIVKDIPNNRFCHILLQNNDNKPVTHSRDS 447
Query: 587 QEVNLDQGIQMLKIFKEHVSKTSILDDFAFYE 618
QEV L QGI+ML+IFKE+ + TSILDDF +Y+
Sbjct: 448 QEVKLRQGIEMLRIFKEYEAHTSILDDFGYYD 479
>AT1G27960.1 | chr1:9742359-9745648 REVERSE LENGTH=540
Length = 539
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 152/220 (69%), Gaps = 21/220 (9%)
Query: 402 DGTIELNRGPRSGRFKNQKLFGHTVTIAVKGQSLPTSDSMNATDVPDRTQFNRDDFPVQY 461
D E NRGPR+ R L + M + D DR F + + Q+
Sbjct: 289 DMLTESNRGPRASR-------------------LNSKSKMISYDRVDR--FCQQELLSQF 327
Query: 462 DDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKCPIFLFFSVNTS 521
DAKFFVIKSYSED++HKSIK+ VWAST NGNKKLDAAY+EA+ K CP+FL FSVN S
Sbjct: 328 RDAKFFVIKSYSEDNVHKSIKHCVWASTKNGNKKLDAAYREAKKKDVACPVFLLFSVNAS 387
Query: 522 GQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPNNILKHIILENNENKPVT 581
QF GVAEM G VDF ++EYWQQD+W+G ++W IVKDVPN++ +HII+E+N+NKPVT
Sbjct: 388 SQFCGVAEMVGPVDFNTSVEYWQQDRWSGHFPVQWLIVKDVPNSLFRHIIIESNDNKPVT 447
Query: 582 NSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQ 621
NSRDTQEV L++GI+ML IF ++SILDDF FYE RQ
Sbjct: 448 NSRDTQEVGLEKGIEMLDIFISCEMRSSILDDFNFYEERQ 487
>AT1G09810.1 | chr1:3181138-3183354 REVERSE LENGTH=471
Length = 470
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 142/180 (78%), Gaps = 4/180 (2%)
Query: 449 RTQFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKS- 507
R +N DF Y+DAKFFVIKSYSEDD+HKSIKY+VW+ST NGNKKLDAA+++A+ K+
Sbjct: 216 REMYNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLDAAFRDAETKTL 275
Query: 508 ---SKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQDKWNGSLSLKWHIVKDVPN 564
K PIFLFFSVN S QFVG+AEM G VDF K L++WQ DKW+G ++WH+VKD+PN
Sbjct: 276 EDGKKRPIFLFFSVNASRQFVGLAEMVGYVDFNKDLDFWQVDKWSGFFPVEWHVVKDIPN 335
Query: 565 NILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSILDDFAFYENRQKLM 624
L+HIIL+NNE+KPVT++RDT E+ L +G+QML IFK++ + T +LDD FYE R+K +
Sbjct: 336 WELRHIILDNNEDKPVTHTRDTHEIKLKEGLQMLSIFKKYSAVTFLLDDMDFYEEREKSL 395
>AT4G11970.1 | chr4:7181223-7182953 FORWARD LENGTH=445
Length = 444
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 24/181 (13%)
Query: 449 RTQFNRDDFPVQYDDAK------------FFVIKSYSEDDIHKSIKYNVWASTTNGNKKL 496
+ +R +FP Q + AK +F+IKS + D+I S++ +WA+ L
Sbjct: 45 KVDVDRRNFPDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPIL 104
Query: 497 DAAYQEAQAKSSKCPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQ-----DKWNGS 551
+ A+ KS + + L FSVN SG F G AEM V + + + W Q + W S
Sbjct: 105 EGAFH----KSGR--VILIFSVNMSGFFQGYAEMLSPVGWRRD-QIWSQGGGKNNPWGRS 157
Query: 552 LSLKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFKEHVSKTSIL 611
+KW + ++P H+ N+ KPV SRD QE+ D G + ++ + +L
Sbjct: 158 FKVKWLRLSELPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELLDANSCDDGLL 217
Query: 612 D 612
+
Sbjct: 218 N 218
>AT1G30460.1 | chr1:10771469-10775323 REVERSE LENGTH=632
Length = 631
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 451 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 510
Q NR P+ ++FV+KS + ++ S++ VWA+ + KL+ A+ +
Sbjct: 224 QTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVEN----- 278
Query: 511 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQQD----KWNGSLSLKWHIVKDVPNNI 566
+ L FSVN + F G A+MT + W+ + ++ + S+KW + ++ +
Sbjct: 279 -VILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHK 337
Query: 567 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 601
+++ NEN PV SRD QE+ G Q+ +
Sbjct: 338 TRNLRNPYNENLPVKISRDCQELEPSVGEQLASLL 372
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.128 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,218,763
Number of extensions: 548630
Number of successful extensions: 1222
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 1199
Number of HSP's successfully gapped: 15
Length of query: 707
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 601
Effective length of database: 8,200,473
Effective search space: 4928484273
Effective search space used: 4928484273
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)