Os05g0105600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : YT521-B-like protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0105600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : YT521-B-like protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.17 | 0.493 | 9.76 | -1.59 | 2.7 | 0.932 | 0.319 | 0.403 | -0.27 | 4.36 | 21.42 | 4342 | -- | -- |
| 110.25 | 0.489 | 9.77 | -1.7 | 2.7 | 0.943 | 0.324 | -- | -0.295 | 4.36 | 21.9 | 4357 | -- | -- |
| 109.94 | 0.488 | 9.77 | -1.59 | 2.69 | 0.897 | -- | 0.484 | -0.311 | 4.32 | 21.43 | 5796 | -- | -- |
| 109.5 | 0.487 | 9.77 | -1.68 | 2.72 | 0.864 | -- | -- | -0.252 | 4.33 | 24.29 | 5907 | -- | -- |
| 458.23 | 1 | 9.65 | -0.51 | -- | -2 | -- | 2.76 | 0.301 | -- | 23.4 | 2705 | -- | -- |
| 136.66 | 0.548 | 9.73 | -1.3 | 2.75 | -- | 0.356 | -- | -0.121 | 4.32 | -- | -- | -- | -- |
| 137 | 0.548 | 9.74 | -1.31 | 2.75 | -- | -- | -- | -0.123 | 4.3 | -- | -- | -- | -- |
| 457.26 | 1 | 9.71 | -0.931 | -- | -1.87 | -- | -- | 0.14 | -- | 24.29 | 5907 | -- | -- |
| 170.94 | 0.609 | 9.7 | -- | 2.71 | 0.411 | -- | -- | -0.0564 | 4.3 | 28.29 | 7203 | -- | -- |
| 545.3 | 1.09 | 9.75 | -1.2 | -- | -- | -- | -- | -0.0499 | -- | -- | -- | -- | -- |
| 182.1 | 0.631 | 9.7 | -- | 2.73 | -- | -- | -- | 0.0227 | 4.31 | -- | -- | -- | -- |
| 479.21 | 1.02 | 9.68 | -- | -- | -2.01 | -- | -- | 0.269 | -- | 24.1 | 1245 | -- | -- |
| 583.2 | 1.13 | 9.72 | -- | -- | -- | -- | -- | 0.0831 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.69 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 3 | 100.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 10 | 101.57 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 11 | 101.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 13 |
| 32 | 102.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 36 | 102.61 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 37 | 102.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 52 | 103.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 57 | 103.24 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 61 | 103.34 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 12 |
| 63 | 103.36 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 64 | 103.38 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 69 | 103.44 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 72 | 103.46 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 108 | 103.77 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 109 | 103.78 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 137 | 104.11 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 14 |
| 152 | 104.27 | temperature | 25.0 | 720 | < th | dose independent | rect. | 5 | 3 |
| 155 | 104.29 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 164 | 104.34 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 210 | 104.95 | temperature | 30.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 230 | 105.26 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 233 | 105.28 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 236 | 105.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 16 |
| 248 | 105.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 281 | 105.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 286 | 105.69 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 287 | 105.70 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 296 | 105.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 303 | 105.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 19 |
| 315 | 105.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 316 | 105.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 322 | 105.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 324 | 105.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 374 | 106.33 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 388 | 106.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 410 | 106.53 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 426 | 106.59 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 462 | 106.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 479 | 106.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 22 |
| 502 | 106.86 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 511 | 106.89 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 523 | 106.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 561 | 107.05 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 566 | 107.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 582 | 107.09 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 585 | 107.11 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 603 | 107.12 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 703 | 107.33 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 729 | 107.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 732 | 107.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 736 | 107.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 739 | 107.41 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 745 | 107.43 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 766 | 107.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 780 | 107.46 | wind | 9.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 783 | 107.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 799 | 107.48 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 800 | 107.48 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 810 | 107.49 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 819 | 107.50 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 824 | 107.51 | wind | 9.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 833 | 107.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 834 | 107.52 | wind | 7.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 837 | 107.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 844 | 107.54 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 2 | NA |
| 845 | 107.54 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 850 | 107.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 860 | 107.56 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 887 | 107.58 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 974 | 107.69 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 1000 | 107.71 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 3 | 18 |