BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0461800 Os08g0461800|AK067364
(243 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0461800 Conserved hypothetical protein 496 e-141
Os08g0461700 Conserved hypothetical protein 256 8e-69
Os08g0461400 Conserved hypothetical protein 174 5e-44
Os09g0443000 Cyclin-like F-box domain containing protein 168 4e-42
Os08g0461300 Cyclin-like F-box domain containing protein 140 1e-33
Os08g0460900 Cyclin-like F-box domain containing protein 130 1e-30
Os08g0461100 Leucine-rich repeat 2 containing protein 129 2e-30
Os08g0462300 Cyclin-like F-box domain containing protein 118 3e-27
Os08g0267000 Cyclin-like F-box domain containing protein 93 2e-19
Os08g0267600 89 2e-18
Os08g0267800 Cyclin-like F-box domain containing protein 82 3e-16
Os08g0461000 Cyclin-like F-box domain containing protein 82 4e-16
Os08g0462200 77 1e-14
Os08g0268200 75 3e-14
Os08g0267200 65 3e-11
>Os08g0461800 Conserved hypothetical protein
Length = 243
Score = 496 bits (1276), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANIN 60
MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANIN
Sbjct: 1 MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANIN 60
Query: 61 IEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKASSI 120
IEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKASSI
Sbjct: 61 IEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKASSI 120
Query: 121 LSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKSATCWSN 180
LSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKSATCWSN
Sbjct: 121 LSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKSATCWSN 180
Query: 181 EMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFRDMEDTW 240
EMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFRDMEDTW
Sbjct: 181 EMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFRDMEDTW 240
Query: 241 LYS 243
LYS
Sbjct: 241 LYS 243
>Os08g0461700 Conserved hypothetical protein
Length = 256
Score = 256 bits (655), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 167/222 (75%), Gaps = 1/222 (0%)
Query: 21 DDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANINIEDYSIDRDFVKLLTSLAQV 80
+ ++W+I+APNL+ LTI SD DY W++++LPS+Q A + ++D S DRDFV+LLT AQV
Sbjct: 35 NQMDEWVIRAPNLKHLTIESDYDYLWRVEELPSLQTATVKVDDDSTDRDFVQLLTCFAQV 94
Query: 81 GELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKASSILSTFGLLTRAPNLLHLEIEI 140
LEL + + + N L+G+SCS +KL+SLTLH NF SSIL F LL R PN+ L+IEI
Sbjct: 95 SMLELHLLATEDNALDGLSCSLEKLKSLTLHANFRSVSSILCIFSLLMRCPNIGVLDIEI 154
Query: 141 TDHE-NQSDEVDIDFLNALWTNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLLGEFY 199
E Q+DE+D +F N L TN LF NLD +++++A C SN+M FIEFVLS+ RLL +F+
Sbjct: 155 MGSEFPQNDEIDAEFFNTLETNDLFTNLDDITLRNAPCLSNDMHFIEFVLSRVRLLSKFW 214
Query: 200 IYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFRDMEDTWL 241
++ DD+ S SKP EEA+IE+AKY+RASPK++VFFR MED ++
Sbjct: 215 VFRDDSNSLSKPSEEAVIEIAKYRRASPKSRVFFRSMEDYYI 256
>Os08g0461400 Conserved hypothetical protein
Length = 207
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 130/201 (64%), Gaps = 6/201 (2%)
Query: 23 FEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANINIEDYSIDRDFVKLLTSLAQVGE 82
+ W+IQAPNL+ IT D GWQI DL +++A ++ YS DRDFVKL+T L+Q E
Sbjct: 11 YHQWVIQAPNLQNFFITGLYDDGWQIGDLTFLEEATVDWPLYSYDRDFVKLITGLSQARE 70
Query: 83 LELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKASSILSTFGLLTRAPNLLHLEIEITD 142
L+ +P D NVLEG+SCSF+ L+ L+L T+ + S++LS F ++ A L L I++ D
Sbjct: 71 LDFAMPVRDVNVLEGLSCSFKNLKCLSLCTSLHLLSNVLSFFCIIRNASKLETLRIKLFD 130
Query: 143 HENQSDEVDIDFLNALWTNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLL--GEFYI 200
Q DEVD DFLN WT+ LF+NL V +++ TC +EM FIEF+LSKAR L + +
Sbjct: 131 DSTQDDEVDNDFLNGQWTDDLFSNLKSVYVRNMTCKLSEMHFIEFILSKARNLEKNDVCL 190
Query: 201 YHDDTGSYSKPREEAIIELAK 221
D SK EEA+IELAK
Sbjct: 191 AED----CSKSNEEAVIELAK 207
>Os09g0443000 Cyclin-like F-box domain containing protein
Length = 554
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 143/240 (59%), Gaps = 9/240 (3%)
Query: 1 MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANIN 60
+I SP L L LS + + DD +W+I+APNL+ LTI S DYGW + DLP ++ A I+
Sbjct: 182 IIENSPLLEMLVLSGIFIDGDDIINWVIRAPNLQHLTICSPNDYGWNLLDLPRLRSAVID 241
Query: 61 IEDYSIDRDFVKLLTSLAQVGELELFI---PSADGNVLEGISCSF---QKLRSLTLHTNF 114
+ DY RDF + L L V +L LF+ PS +LE + C+F + L+SL L+ +F
Sbjct: 242 LWDYLGGRDFAEFLGKLLHVRKLHLFVSYQPSNGAKILETLPCTFDSLKSLKSLKLYMDF 301
Query: 115 YKASSILSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKS 174
+ +IL+ F LL APNL L+I ITD+E Q E + F NA WT + ANL V I
Sbjct: 302 CELPAILTIFCLLRNAPNLEKLKIMITDNE-QKVEANGVFQNAEWTGGMCANLQIVQITR 360
Query: 175 ATCWSNEMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFR 234
+ NEM FIE +LSKA LL + H D S E+A+ EL KYKRASP+A++ F+
Sbjct: 361 ISWLPNEMSFIELILSKASLLRTISVTHGDKCLMSN--EDALSELLKYKRASPQAQILFK 418
>Os08g0461300 Cyclin-like F-box domain containing protein
Length = 432
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 134/243 (55%), Gaps = 16/243 (6%)
Query: 1 MIRMSPSLVSLELSNVE-VTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANI 59
+I SP L + L +V + D EDW+I+A NL +LTI +YG +++DLP +++ +
Sbjct: 194 LIAASPVLQEVTLIDVVLIGDGPDEDWVIRASNLRKLTIALGSEYGGRMEDLPRLEECCL 253
Query: 60 NIEDYSIDRDFVKLLTSLAQVGELELF---IPSADGNVLEGISCSFQKLRSLTLHTNFYK 116
++ K LT +A+V +L + + S + +VLE + F+ LRSL L NF
Sbjct: 254 ------FGLNYAKYLTGMARVTKLTFYCNCMLSTEVDVLERLPFLFENLRSLILGVNFCM 307
Query: 117 ASSILSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKSAT 176
S IL+ F LL AP L L++ Q E + FLNA W N +FA L V +K
Sbjct: 308 MSHILAIFCLLRSAPVLEELDVWNWSEGAQEMEANDVFLNAQWINHMFAKLHVVRMKKVY 367
Query: 177 CWSNEMRFIEFVLSKARLLG--EFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFR 234
C +NEM FIEF+LSKAR+L + D S EEAII++ +Y RASP A+V F
Sbjct: 368 CLNNEMHFIEFILSKARVLRVLSLTLASDSLSSI----EEAIIDITEYPRASPDAQVIFM 423
Query: 235 DME 237
+E
Sbjct: 424 GVE 426
>Os08g0460900 Cyclin-like F-box domain containing protein
Length = 584
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 12/241 (4%)
Query: 1 MIRMSPSLVSLELSNVE-VTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANI 59
+I SP L L + + + D EDW+I+ NL +LTI YG +I+D+ +++ +
Sbjct: 168 LIAASPVLQEASLIDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIEDIARLEECCL 227
Query: 60 NIEDYSIDRDFVKLLTSLAQVGELELF---IPSADGNVLEGISCSFQKLRSLTLHTNFYK 116
+Y+ K L +A V +L + I S + +VLE + F+ LRSL L NF
Sbjct: 228 FGPNYA------KYLMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLGVNFCI 281
Query: 117 ASSILSTFGLLTRAPNLLHLEIEITDHENQSDEVDIDFLNALWTNSLFANLDFVSIKSAT 176
S IL+TF LL AP L L++ + Q + D +F +A W N +FA L V +K +
Sbjct: 282 LSHILATFCLLRSAPVLEELDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHVVRMKKVS 341
Query: 177 CWSNEMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIELAKYKRASPKAKVFFRDM 236
C NEM IEF+LSKAR L + +S EEAI ++ +Y RASP A+V F
Sbjct: 342 CLCNEMLLIEFILSKARALRVLSLTLASNSQFSI--EEAITDITEYPRASPYAQVIFAGR 399
Query: 237 E 237
E
Sbjct: 400 E 400
>Os08g0461100 Leucine-rich repeat 2 containing protein
Length = 671
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 137/260 (52%), Gaps = 31/260 (11%)
Query: 1 MIRMSPSLVSLELSNV-EVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANI 59
+I SP L +EL +V V D E+W+I+APNL +L + + YG ++++LP ++ +
Sbjct: 261 LISASPLLEEVELVSVFLVGDYPDEEWVIRAPNLRKLIMVAAFPYGGRVEELPRLEQGIL 320
Query: 60 NIEDYSIDRDFVKLLTSLAQVGELEL---FIPSADGNVLEGISCSFQKLRSLTLHTNFYK 116
+Y+ K LT +A V +LE ++ S + +VLE + F+ LRSL + NF K
Sbjct: 321 CGPNYA------KFLTGMAHVTKLEFMCHYMLSTEVDVLEQLPFLFENLRSLVISVNFCK 374
Query: 117 ASSILSTFGLLTRAPNLL----------HLEIE--ITDHENQS-DEVDID----FLNALW 159
S IL F LL AP L HL+I IT + QS D DID FLNA
Sbjct: 375 MSHILFMFCLLRSAPVLEELDVVVMLNDHLQIHYAITCFKGQSNDAQDIDANDEFLNAQP 434
Query: 160 TNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLLGEFYIYHDDTGSYSKPREEAIIEL 219
T +FA L V +K C NEM F+EFVL+KAR+L +Y + S E+A I
Sbjct: 435 TYDMFAKLRVVRMKKVACLCNEMHFMEFVLNKARVLRVLSVYPSSGVTCSN--EQAFI-- 490
Query: 220 AKYKRASPKAKVFFRDMEDT 239
++ R SP A+V F + E
Sbjct: 491 TEHPRVSPDAQVIFMNRESA 510
>Os08g0462300 Cyclin-like F-box domain containing protein
Length = 418
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 128/235 (54%), Gaps = 10/235 (4%)
Query: 1 MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANIN 60
MI SP LV L LSNV + +E W I+ PNL + I +D DYG +I +LP ++ A +
Sbjct: 185 MIAASPLLVELSLSNVR-SLHHWERWFIRGPNLRSVWIWTDYDYGCRIGELPRLEHAIVF 243
Query: 61 IEDYSIDRDFVKLLTSLAQVGEL--ELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKAS 118
+ K+L ++ L + +GN E S +FQ LRSL LH + S
Sbjct: 244 ASAIKTE-VLCKILEGISHAETLGFDAITDQFNGNPPERFSFTFQNLRSLDLHACLDQIS 302
Query: 119 SILSTFGLLTRAPNLLHLEIEITDHENQSDEVDID-FLNALWTNSLFANLDFVSIKSATC 177
S F +L APNL LEIE+ +++ D ++ F NA ++ +F L V + S C
Sbjct: 303 STSWVFCILRSAPNLETLEIEVDCDDDEVDAGSVEGFANAQASDDIFPRLRDVWLHSIDC 362
Query: 178 WSNEMRFIEFVLSKARLLGEFYIYHDDTG-SYSKPREEAIIELAKYKRASPKAKV 231
SNEM FI+FVLSKAR L F + + SY +EA IE+AKYKRASP AK+
Sbjct: 363 SSNEMCFIKFVLSKARSLELFSVRVTSSRLSY----QEACIEMAKYKRASPLAKL 413
>Os08g0267000 Cyclin-like F-box domain containing protein
Length = 439
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 1 MIRMSPSLVSLELSNVEVTDDDFED-------WIIQAPNLERLTITSDIDYGWQI-QDLP 52
++ +P L L L +V+V ++ ED W ++AP L L + + +D G +I ++ P
Sbjct: 179 LVAAAPLLAELRLDDVDV--EELEDPTPPLYKWAVRAPRLRVLKMATRLDIGCRIPEEPP 236
Query: 53 SIQDANINIEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHT 112
+++A I+I + + F ++ + V +L I + LEGISC F LR + + T
Sbjct: 237 LLEEAYIDIGNSFMS--FHEIFRGIITVRKLWFNIHEFNEYPLEGISCKFDNLREVHVTT 294
Query: 113 NFYKASSILSTFGLLTRAPNLLHLEIEITD----HENQSDEVDI-DFLNALWTNSLFANL 167
NF + S +S F LL AP + L IE D H + E++ DF+++ + F++L
Sbjct: 295 NFGQQPSTMSLFSLLRCAPYIEDLSIEAEDISFSHRDDPYEIEEDDFISSGINENSFSSL 354
Query: 168 DFVSIKSATCWSNEMRFIEFVLSKARLLGEF---YIYHDDTGSYSKPREEAIIELAKYKR 224
+VS+ T SN++RF++F+LSK L F ++Y Y K A L ++R
Sbjct: 355 KYVSLSGITYSSNQLRFMKFLLSKTESLQSFAVTFLYSKSNKEYVK----ACRVLRAFRR 410
Query: 225 --ASPKAK 230
ASP+A+
Sbjct: 411 ASASPQAR 418
>Os08g0267600
Length = 191
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 93 NVLEGISCSFQKLRSLTLHTNFYKASSILSTFGLLTRAPNLLHLEIEITDHENQSDEVDI 152
N+LEGI+C F+ LR +L+ +F + SS+LS LL AP++ HLEI+ D E +++D
Sbjct: 5 NMLEGITCKFENLREASLNIDFGQLSSVLSIDSLLKFAPHIEHLEIQTLDTELDKEKIDE 64
Query: 153 DFLNALWTNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLLGEFYI--YHDDTGSYSK 210
D LN+ ++ LFA+L VS+ A N+M F++F+LSKA L F + DD G S+
Sbjct: 65 DSLNSEISSDLFASLKHVSLTGAKHRENQMCFMKFLLSKAGSLQTFAVTFMFDDDGK-SE 123
Query: 211 PREEAIIELAKYKRASPK 228
E EL + ++ASP+
Sbjct: 124 WFENKCKELIECQKASPQ 141
>Os08g0267800 Cyclin-like F-box domain containing protein
Length = 463
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 40/263 (15%)
Query: 1 MIRMSPSLVSLELSNV-EVTDDDFEDWIIQAPNLERLTITSDI--DYGWQI-QDLPSIQD 56
+I + L L LS V + + W I+AP L +L IT ++ D G +I LP +++
Sbjct: 194 LIVAAEKLAVLNLSPVITINGGGVDTWAIRAPKLRKLYITMEMGDDNGCRIPMPLPMLEE 253
Query: 57 ANINIEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYK 116
I+ + +DF+ +++ V +L + N+LEGI+C F+ LR L +F +
Sbjct: 254 VTISFDRLFGTQDFLDAFQNISTVNKLFFKSDKFNINMLEGITCKFENLREGGLIIDFGQ 313
Query: 117 ASSILSTFGLLTRAPNLLHLEIEITDHE---------------------------NQSDE 149
SS+LS LL AP++ HL I TDH N DE
Sbjct: 314 RSSVLSLVSLLKFAPHIEHLYIR-TDHSILDPVSSEDEMDEDSLNSEDEFDEDSLNSQDE 372
Query: 150 VDIDFLNALWTNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLLGEF---YIY-HDDT 205
+D D LN+ ++ L A+L +V++ + SN+M F++ +LSKAR L F ++Y ++
Sbjct: 373 IDEDSLNSEISSDLLASLKYVTLINMKYNSNQMCFMKLLLSKARSLQTFDVTFVYSYESN 432
Query: 206 GSYSKPREEAIIELAKYKRASPK 228
G Y A EL + ++ASP+
Sbjct: 433 GRYGN----ACRELTECQKASPQ 451
>Os08g0461000 Cyclin-like F-box domain containing protein
Length = 279
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 1 MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANIN 60
MI +P L SLEL NV + ++++W+I+APNL+ L I + D+ W+I+ LPSIQ A I+
Sbjct: 192 MISSAPLLQSLELKNVSMEGGEWDEWVIRAPNLKDLIIQLEFDFLWEIEQLPSIQTATIS 251
Query: 61 IEDYSIDRDFVKLLTSLAQ 79
+++ S DRDFV+LLT A+
Sbjct: 252 VDNESTDRDFVQLLTCFAR 270
>Os08g0462200
Length = 358
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 1 MIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTI-TSDIDYGWQIQDLPSIQDANI 59
MI SP L+ L L NV E W ++ PN+ L I D D+G +I +LP ++DA I
Sbjct: 184 MIAASPLLLELSLDNVHSFHHS-EVWFVRGPNIRSLRIWAVDQDFGCRIGELPRLEDAVI 242
Query: 60 NIEDYSIDRDFVKLLTSLAQVGELEL--FIPSADGNVLEGISCSFQKLRSLTLHTNFYKA 117
++ + K L +A V L+ + N E S +FQ LRSL LH +
Sbjct: 243 FLDSEVTTQVLCKTLEGIAHVESLDFNALMHQFSDNPPERFSFTFQNLRSLDLHACLDQI 302
Query: 118 SSILSTFGLLTRAPNLLHLEIEITDHENQSDEVDID-FLNALWTNSLFANL 167
SS F +L APNL LEIE+ +++ D+ ++ F NA ++ +F L
Sbjct: 303 SSTSLVFSILRCAPNLEKLEIEVGCYDDLVDDGTVEGFANAQTSDDIFPRL 353
>Os08g0268200
Length = 394
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 49/237 (20%)
Query: 1 MIRMSPSLVSLELSNV-EVTDDDFEDWIIQAPNLERLTITSDI--DYGWQI-QDLPSIQD 56
+I + L L+LS V T + W I+AP L L IT + D G +I LP +++
Sbjct: 78 LIVAAEKLAVLKLSLVITTTGGGVDTWAIRAPKLRELFITMAMGDDNGCRIPMPLPMLEE 137
Query: 57 ANINIEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYK 116
A I+ + +DF+ +++ + N+LEGI+C F+ +R L +F +
Sbjct: 138 ATISFDRLFGTQDFLDAFQNISTF----------NINMLEGITCKFENIREARLTIDFGQ 187
Query: 117 ASSILSTFGLLTRAPNLLHLEIEIT----------------------DHENQSDEVDID- 153
S++LS LL AP++ HL I I D N DE+D D
Sbjct: 188 RSNVLSLASLLKFAPHIEHLCISIAYSEWDEDEIDEDPLNSEDEIDEDPLNSEDEIDEDS 247
Query: 154 ----------FLNALWTNSLFANLDFVSIKSATCW--SNEMRFIEFVLSKARLLGEF 198
FLN+ ++ LFA+L +VS+ SN+M F++ +LSKAR L F
Sbjct: 248 LSSEDEIYEYFLNSEISSYLFASLKYVSLTEVKVKDNSNQMCFMKHLLSKARSLQTF 304
>Os08g0267200
Length = 159
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 89 SADGNVLEGISCSFQKLRSLTLHTNFYKASSILSTFGLLTRAPNLLHLEIEITDHENQS- 147
+ D N LE I+ F+ LR+ L +F K SSI+S F LL AP + L IE+ E Q
Sbjct: 4 TVDENPLERITWKFRNLRTSNLSVDFGKISSIMSIFSLLRCAPQIEQLNIEVDLKEAQGD 63
Query: 148 DEVDIDFLNALWTNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLLGEFYI---YHDD 204
DE+ L A + L +L V++ C+ EM FI+ +LSKA L + +H
Sbjct: 64 DEIHEGILEAYMSEDLVRSLKRVTLSFIKCFPGEMSFIKLLLSKAASLESLKVMMFWH-- 121
Query: 205 TGSYSKPREEAIIELAKYKRAS 226
+ P +A + YK+ S
Sbjct: 122 ---HIMPVSDACLLFTTYKKES 140
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,777,712
Number of extensions: 299410
Number of successful extensions: 836
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 814
Number of HSP's successfully gapped: 15
Length of query: 243
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 145
Effective length of database: 11,918,829
Effective search space: 1728230205
Effective search space used: 1728230205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)