BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0624600 Os07g0624600|AK109902
(366 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0624600 Similar to Trehalose-6-phosphate phosphatase 701 0.0
Os02g0753000 Similar to Trehalose-6-phosphate phosphatase 369 e-102
Os03g0386500 Similar to Trehalose-6-phosphate phosphatase 368 e-102
Os06g0222100 HAD-superfamily hydrolase subfamily IIB protein 357 9e-99
Os09g0369400 Similar to Trehalose-6-phosphate phosphatase 349 2e-96
Os02g0661100 Similar to Trehalose-6-phosphate phosphatase 347 8e-96
Os10g0553300 Similar to Trehalose-6-phosphate phosphatase 330 1e-90
Os07g0485000 Similar to Trehalose-6-phosphate phosphatase 327 6e-90
Os04g0554000 320 7e-88
Os12g0192800 123 3e-28
Os08g0409100 Trehalose-phosphatase domain containing protein 89 5e-18
>Os07g0624600 Similar to Trehalose-6-phosphate phosphatase
Length = 366
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/366 (94%), Positives = 345/366 (94%)
Query: 1 MTNHXXXXXXXXXXXXXXXXXXXXXRHFPPFLAPSSRLTDCKKAAAHVDLAGAGGVATVP 60
MTNH RHFPPFLAPSSRLTDCKKAAAHVDLAGAGGVATVP
Sbjct: 1 MTNHAGFAADDAVTAAVPVQAAQGGRHFPPFLAPSSRLTDCKKAAAHVDLAGAGGVATVP 60
Query: 61 GSWPRHAKPVSGAELDDWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDR 120
GSWPRHAKPVSGAELDDWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDR
Sbjct: 61 GSWPRHAKPVSGAELDDWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDR 120
Query: 121 AFMSDEMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEY 180
AFMSDEMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEY
Sbjct: 121 AFMSDEMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEY 180
Query: 181 NHNMKAKQGDAVTFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEA 240
NHNMKAKQGDAVTFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEA
Sbjct: 181 NHNMKAKQGDAVTFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEA 240
Query: 241 EWGVLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPI 300
EWGVLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPI
Sbjct: 241 EWGVLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPI 300
Query: 301 YIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIKINGD 360
YIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIKINGD
Sbjct: 301 YIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIKINGD 360
Query: 361 KGLIGK 366
KGLIGK
Sbjct: 361 KGLIGK 366
>Os02g0753000 Similar to Trehalose-6-phosphate phosphatase
Length = 367
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/300 (60%), Positives = 226/300 (75%), Gaps = 14/300 (4%)
Query: 57 ATVPGSWPRHAKPVSGAELDDWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVA 116
A+ P R A V E W+ KHPSAL+ FE +AA ++GK+IV+F+DYDGTLSPIVA
Sbjct: 68 ASSPTRSSRSASDVD--EFTAWVRKHPSALSKFEEIAAKSRGKKIVMFMDYDGTLSPIVA 125
Query: 117 DPDRAFMSDEMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAA 176
DPD A+MSD MR AVR VAK FPTAIVSGRC DKV +FV L +LYYAGSHGMDI+GP++
Sbjct: 126 DPDTAYMSDAMRAAVREVAKTFPTAIVSGRCRDKVRNFVGLSDLYYAGSHGMDIKGPSS- 184
Query: 177 ASEYNHNMKAKQGDAVTFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRC 236
++ QPA++FLP+I+EVY L E+ S G+ VENNKFCLSVH+RC
Sbjct: 185 -----------NPESALCQPASEFLPMIDEVYKTLVEKTKSTPGAKVENNKFCLSVHFRC 233
Query: 237 VDEAEWGVLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNN 296
VDE W L +V+AVI+ YP L+L++GRKVLEIRP I+WDKG AL+FLL+SLG+ +
Sbjct: 234 VDEKRWNALGEQVKAVIKEYPKLKLTQGRKVLEIRPSIEWDKGKALEFLLESLGFANCGD 293
Query: 297 VFPIYIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIK 356
V P+YIGDDRTDEDAFKVLR GQG+GILV+K PK+T ASY+L++P+EV EFL +LV+ K
Sbjct: 294 VMPVYIGDDRTDEDAFKVLRKRGQGLGILVSKCPKDTNASYSLQDPTEVMEFLLRLVEWK 353
>Os03g0386500 Similar to Trehalose-6-phosphate phosphatase
Length = 310
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/290 (64%), Positives = 223/290 (76%), Gaps = 13/290 (4%)
Query: 74 ELDDWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSDEMREAVRG 133
E D+WMEKHPSAL FE++AAAAKGK IVVFLDYDGTLSPIV DPDRA M+DEMR+AVRG
Sbjct: 19 EHDEWMEKHPSALGKFEALAAAAKGKRIVVFLDYDGTLSPIVEDPDRAVMTDEMRDAVRG 78
Query: 134 VAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEYNHNMKAKQGDAVT 193
VA FPTAIVSGRC DKV FV LEELYYAGSHGMDI+GPT AA+ ++ ++V
Sbjct: 79 VAARFPTAIVSGRCRDKVLSFVGLEELYYAGSHGMDIQGPTNAAAS---KGGEEEEESVL 135
Query: 194 FQPAADFLPVIEEVYHVLKERMAS-IRGSLVENNKFCLSVHYRCVDEAEWGVLDGKVRAV 252
QPA +FLP+I E Y L E++ I G+ VENNKFCLSVH+R VDE WG + +VRAV
Sbjct: 136 CQPAREFLPMIGEAYAALVEKVEGVIPGAKVENNKFCLSVHFRRVDERRWGAVADQVRAV 195
Query: 253 IEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEG---------RNNVFPIYIG 303
+ GYP LRL++GRKVLE+RP I WDKG AL+FLL +LG+ ++ FPIYIG
Sbjct: 196 LRGYPRLRLTQGRKVLEVRPAIKWDKGEALRFLLSALGFSAAGDVEDDGDDDDAFPIYIG 255
Query: 304 DDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLV 353
DDRTDEDAF+VLR G G GILV++ PK+T AS++LR+P EVK+FLRKLV
Sbjct: 256 DDRTDEDAFRVLRARGHGAGILVSRFPKDTCASFSLRDPGEVKDFLRKLV 305
>Os06g0222100 HAD-superfamily hydrolase subfamily IIB protein
Length = 484
Score = 357 bits (915), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 178/282 (63%), Positives = 211/282 (74%), Gaps = 11/282 (3%)
Query: 65 RHAKPVSGAELDDWME-KHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFM 123
R A AE D W + KHPSAL FE VAAAA GK +VVFLDYDGTLSPIVADPD AFM
Sbjct: 64 RPAAAAVDAEYDAWTQRKHPSALGSFEQVAAAASGKRVVVFLDYDGTLSPIVADPDMAFM 123
Query: 124 SDEMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEYNHN 183
SDEMR AVR VA+HFP AIV+GRC+DKV FV L ELYYAGSHGMDI+GP++ E
Sbjct: 124 SDEMRAAVRDVAEHFPAAIVTGRCVDKVQSFVGLPELYYAGSHGMDIKGPSSNEEEDTK- 182
Query: 184 MKAKQGDAVTFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEAEWG 243
+ QPA +FLPVI + Y L E+ S G+ VENNKFCLSVH+RCVDE W
Sbjct: 183 --------ILLQPAREFLPVINKAYKALMEKTKSTPGARVENNKFCLSVHFRCVDEKRWN 234
Query: 244 VLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGY-EGRNNVFPIYI 302
L +V+AV+ YP+L+L++GRKVLEIRP I WDKG A++FLLKSLG+ + R +V P+YI
Sbjct: 235 PLAEQVKAVLRDYPELKLTQGRKVLEIRPSIMWDKGKAVEFLLKSLGFDDDRRDVLPVYI 294
Query: 303 GDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSE 344
GDDRTDEDAFKVLR GQG+GILV+K KET ASY+L++P+E
Sbjct: 295 GDDRTDEDAFKVLRKRGQGLGILVSKCAKETDASYSLQDPAE 336
>Os09g0369400 Similar to Trehalose-6-phosphate phosphatase
Length = 464
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/297 (59%), Positives = 214/297 (72%), Gaps = 36/297 (12%)
Query: 81 KHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSD--------------- 125
+HPSAL FE V AA+KGK+IV+FLDYDGTLSPIV DPD AFMS+
Sbjct: 127 RHPSALGEFEKVVAASKGKQIVMFLDYDGTLSPIVDDPDAAFMSETVSLSSPPLSPTLLL 186
Query: 126 ------------EMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGP 173
+MR AVR VAKHFPTAIVSGRC DKVF+FVKL ELYYAGSHGMDI+GP
Sbjct: 187 HSSSSHTSLLPHQMRMAVRSVAKHFPTAIVSGRCRDKVFEFVKLAELYYAGSHGMDIKGP 246
Query: 174 T---AAASEYNHNMKAKQGDAVTFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCL 230
AAA HN V FQPA++FLP+IE+V+ L++ +SI G+ VENNKFC+
Sbjct: 247 ASRHAAAKSPPHN------KGVLFQPASEFLPMIEQVHQRLEQATSSIPGAKVENNKFCV 300
Query: 231 SVHYRCVDEAEWGVLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLG 290
SVH+RCVDE WG L VR V+ +P LRLS+GR V E+RP I WDKG AL+FLL SLG
Sbjct: 301 SVHFRCVDEKSWGALAETVRRVVREFPRLRLSQGRMVFEVRPTIKWDKGKALEFLLDSLG 360
Query: 291 YEGRNNVFPIYIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKE 347
+ ++V P+YIGDDRTDEDAFKVLR GQG+GILV+K PKET+AS++L+EP+E+K+
Sbjct: 361 FADCSDVLPVYIGDDRTDEDAFKVLRRRGQGVGILVSKHPKETSASFSLQEPAELKK 417
>Os02g0661100 Similar to Trehalose-6-phosphate phosphatase
Length = 371
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 175/280 (62%), Positives = 210/280 (75%), Gaps = 6/280 (2%)
Query: 78 WMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSDEMREAVRGVAKH 137
WM K PSALA F+ + A+A+GK+I VFLDYDGTLSPIV DPD+A MS MR AVR VAK+
Sbjct: 93 WMAKCPSALASFKQIVASAQGKKIAVFLDYDGTLSPIVDDPDKAVMSPVMRAAVRNVAKY 152
Query: 138 FPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEYNHNMKA-KQGDAVTFQP 196
FPTAIVSGR +KVF+FVKL+ELYYAGSHGMDI P+A NH A K A FQP
Sbjct: 153 FPTAIVSGRSRNKVFEFVKLKELYYAGSHGMDIMAPSA-----NHEHSAEKSKQANLFQP 207
Query: 197 AADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEAEWGVLDGKVRAVIEGY 256
A DFLP+I+EV L + ++ I G+ VENNKFC+SVHYR V E +W ++ V V+E +
Sbjct: 208 AHDFLPMIDEVTKSLLQVVSGIEGATVENNKFCVSVHYRNVAEKDWKLVARLVNEVLEAF 267
Query: 257 PDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPIYIGDDRTDEDAFKVLR 316
P L+++ GR VLE+RPVIDWDKG A++FLL+SLG NV PIYIGDDRTDEDAFKVLR
Sbjct: 268 PRLKVTNGRMVLEVRPVIDWDKGKAVEFLLQSLGLNDSENVIPIYIGDDRTDEDAFKVLR 327
Query: 317 NMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIK 356
G GILV++VPKET A Y+LR+PSEV EFL LV+ K
Sbjct: 328 QRNCGYGILVSQVPKETEAFYSLRDPSEVMEFLNFLVRWK 367
>Os10g0553300 Similar to Trehalose-6-phosphate phosphatase
Length = 382
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 214/300 (71%), Gaps = 10/300 (3%)
Query: 67 AKPVSGAELD----DWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAF 122
A V ELD +W+ HPSAL FE + A+GK + +FLDYDGTLSPIV +P+ A
Sbjct: 79 ANDVQADELDLLYRNWVVNHPSALTSFEDIVNLARGKRLALFLDYDGTLSPIVDNPENAV 138
Query: 123 MSDEMREAVRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEYNH 182
MSDEMR AV+ VA FPTAI+SGR DKVFDFVKL ELYYAGSHGMDI GP +
Sbjct: 139 MSDEMRSAVKHVASLFPTAIISGRSRDKVFDFVKLTELYYAGSHGMDIMGPVRKSDSSGQ 198
Query: 183 NMKA-----KQGDAVT-FQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRC 236
+++ +G V FQPA++FLP+I EVY L E + I G+ +E+NKFC+SVHYR
Sbjct: 199 HVECIRSTDSEGKEVNLFQPASEFLPMISEVYKKLSESIKDIDGARMEDNKFCVSVHYRN 258
Query: 237 VDEAEWGVLDGKVRAVIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNN 296
V ++G + +V AV++ YP LRL+ GRKVLE+RPVIDW+KG A++FLL+SLG G+ +
Sbjct: 259 VAPHDYGEVHQRVTAVLKNYPCLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLCGKED 318
Query: 297 VFPIYIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIK 356
V PIY+GDD+TDEDAFKVL+ G GILV+ VPK+T A Y++R+P+EV EFL+KL K
Sbjct: 319 VLPIYVGDDKTDEDAFKVLKANSIGFGILVSSVPKDTDAFYSVRDPAEVMEFLKKLASWK 378
>Os07g0485000 Similar to Trehalose-6-phosphate phosphatase
Length = 359
Score = 327 bits (839), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 167/285 (58%), Positives = 203/285 (71%), Gaps = 6/285 (2%)
Query: 78 WMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSDEMREAVRGVAKH 137
W +K+PSAL F+ + A KGK+I +FLDYDGTLSPIV +PD A MSD+MRE VR A H
Sbjct: 67 WTKKYPSALNAFDHIVAYGKGKKIALFLDYDGTLSPIVDEPDNAIMSDQMREVVRNAALH 126
Query: 138 FPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAA-SEYNH----NMKAKQGDAV 192
PTAI+SGR DKVFDFVKL ELYYAGSHGMDI GP S NH N KQG V
Sbjct: 127 LPTAIISGRSRDKVFDFVKLTELYYAGSHGMDIMGPVGEHDSVTNHRSSINSNRKQGKGV 186
Query: 193 -TFQPAADFLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEAEWGVLDGKVRA 251
FQ +FLP+I EV+ +L ++ +I G +ENNKFC+SVHYR V+E W ++
Sbjct: 187 KIFQAGTEFLPMINEVFRLLIDKTKAIDGVKIENNKFCVSVHYRNVEEKNWQLVSQCTND 246
Query: 252 VIEGYPDLRLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPIYIGDDRTDEDA 311
V++ YP LRL+ GRKVLEIRPVIDW+KG A++FLL SL NV PIYIGDD TDEDA
Sbjct: 247 VLKVYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLDSLDLASCKNVLPIYIGDDCTDEDA 306
Query: 312 FKVLRNMGQGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIK 356
FKVLR+ +G GILV+ VPK++ A Y+L +PSEV EFL++LV K
Sbjct: 307 FKVLRDDKRGFGILVSSVPKDSHALYSLIDPSEVMEFLKRLVMWK 351
>Os04g0554000
Length = 358
Score = 320 bits (821), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 200/277 (72%), Gaps = 4/277 (1%)
Query: 80 EKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSDEMREAVRGVAKHFP 139
E PSAL +F+ + A+A+ K++V+FLDYDGTLSPIV DP++AFMS EMR V+ VAKHFP
Sbjct: 79 EICPSALCFFDQIVASAQDKKVVLFLDYDGTLSPIVNDPEKAFMSSEMRATVKSVAKHFP 138
Query: 140 TAIVSGRCIDKVFDFVKLEELYYAGSHGMDIRGPTAAASEYNHNMKAKQGDAVTFQPAAD 199
TAIVSGR DKVFDFVKL E+YYAGSHGMDI A + K + FQPA +
Sbjct: 139 TAIVSGRSRDKVFDFVKLTEIYYAGSHGMDILASFADSDSTIEKTKETK----LFQPANE 194
Query: 200 FLPVIEEVYHVLKERMASIRGSLVENNKFCLSVHYRCVDEAEWGVLDGKVRAVIEGYPDL 259
FL +I EV L E +I+G+ VENNKFC+SVHYR VD+ W ++ V V++ +P L
Sbjct: 195 FLTMITEVSKSLIEVTKAIKGATVENNKFCVSVHYRNVDKKNWKLVAQVVNNVLKDFPSL 254
Query: 260 RLSKGRKVLEIRPVIDWDKGSALQFLLKSLGYEGRNNVFPIYIGDDRTDEDAFKVLRNMG 319
++S GRKVLE+RP+I+WDKG A++FLL+SL + V PIYIGDD+TDEDAFKVLR
Sbjct: 255 KVSTGRKVLEVRPMINWDKGKAVEFLLRSLELDDSETVLPIYIGDDKTDEDAFKVLRERK 314
Query: 320 QGIGILVTKVPKETAASYTLREPSEVKEFLRKLVKIK 356
G GILV++VPK++ A + LR PSEV EFL LV+ K
Sbjct: 315 NGCGILVSQVPKKSEAFFMLRGPSEVMEFLSSLVRWK 351
>Os12g0192800
Length = 261
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 72/100 (72%)
Query: 71 SGAELDDWMEKHPSALAWFESVAAAAKGKEIVVFLDYDGTLSPIVADPDRAFMSDEMREA 130
SG E D + S L F+ + + A+GK+I +FLDYDGTLSPIV +P+ AFMS EMRE
Sbjct: 79 SGCENDTCKTQCTSTLVSFDEITSNAQGKKIALFLDYDGTLSPIVNNPEMAFMSPEMRET 138
Query: 131 VRGVAKHFPTAIVSGRCIDKVFDFVKLEELYYAGSHGMDI 170
VR AK FPTAIV+GR KVF+FVKL E YYAG HG+DI
Sbjct: 139 VRDAAKIFPTAIVTGRSRRKVFEFVKLVERYYAGCHGLDI 178
>Os08g0409100 Trehalose-phosphatase domain containing protein
Length = 139
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 47/56 (83%)
Query: 290 GYEGRNNVFPIYIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETAASYTLREPSEV 345
G+ NV P+YIGDDRTDEDAFKVLR GQGIGILV+K PK+T ASY+L+EP+EV
Sbjct: 41 GFADCTNVLPVYIGDDRTDEDAFKVLRKRGQGIGILVSKYPKDTNASYSLQEPAEV 96
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,639,437
Number of extensions: 565409
Number of successful extensions: 1456
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1444
Number of HSP's successfully gapped: 11
Length of query: 366
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 264
Effective length of database: 11,709,973
Effective search space: 3091432872
Effective search space used: 3091432872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)