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Os02g0661100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Trehalose-6-phosphate phosphatase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.39 (0.057) R2 : 0.781
β1 : -5.97 (0.283) R2dD : 0.484 R2D : 0.448
β2 : 2.53 (0.135) R2dC : 0.171 R2C : 0.161
β3 : -4.27 (0.256) R2dE : 0.24 R2E : -0.188
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -5.17 (0.888) R2dD*E : 0.0529 R2D*E : 0.125
γ1 : -1.31 (0.125) R2dN8 : 0.0884 R2N8 : -0.0611
σ : 0.98
deviance : 442.34
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_____
C
peak time of C : 16.4
E
wheather : radiation
threshold : 0.98
memory length : 11348
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
438.17 0.983 8.39 -5.96 2.55 -4.29 -1.26 -5.22 -1.31 16.4 1 11362 -- --
479 1.02 8.51 -6.73 2.25 -3.9 -1.53 -- -1.52 15.7 1.23 9728 -- --
442.34 0.98 8.39 -5.97 2.53 -4.27 -- -5.17 -1.31 16.4 0.98 11348 -- --
473.11 1.01 8.49 -6.84 2.35 -3.85 -- -- -1.46 16.1 1.301 11212 -- --
559.59 1.1 8.47 -6.33 -- -5.64 -- -4.02 -1.6 -- 1.17 12194 -- --
711.94 1.25 8.33 -5.99 2.51 -- -0.996 -- -0.678 17.1 -- -- -- --
714.25 1.25 8.34 -5.99 2.51 -- -- -- -0.683 17.1 -- -- -- --
578.75 1.12 8.57 -7.42 -- -5.42 -- -- -1.9 -- 1.351 12188 -- --
1377.95 1.73 8.32 -- 2.47 -3.07 -- -- -0.707 16.6 8.497 8585 -- --
1043.5 1.51 8.31 -6.08 -- -- -- -- -0.747 -- -- -- -- --
1660.5 1.91 8.19 -- 2.61 -- -- -- -0.0159 17.1 -- -- -- --
1588.98 1.86 8.37 -- -- -4.67 -- -- -1.58 -- 7.29 9291 -- --
2018.85 2.1 8.16 -- -- -- -- -- -0.072 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 432.19 radiation 20.0 14400 > th dose dependent rect. 16 16
2 432.24 humidity 90.0 43200 > th dose independent rect. 8 1
3 432.50 humidity 90.0 43200 < th dose independent rect. 8 1
6 436.02 radiation 1.0 14400 > th dose dependent rect. 18 12
7 436.19 humidity 60.0 43200 > th dose independent rect. 15 1
10 437.22 humidity 90.0 43200 > th dose dependent rect. 8 2
15 437.72 wind 5.0 43200 < th dose independent rect. 5 1
18 438.12 radiation 20.0 14400 > th dose dependent rect. 6 2
33 438.42 humidity 90.0 43200 < th dose independent rect. 7 15
42 439.04 radiation 10.0 14400 < th dose independent rect. 16 15
46 439.21 humidity 90.0 43200 < th dose independent rect. 19 2
50 439.56 humidity 90.0 43200 < th dose independent rect. 15 6
51 439.61 radiation 1.0 14400 > th dose dependent rect. 4 2
73 440.45 humidity 80.0 43200 > th dose dependent rect. 17 2
82 440.99 radiation 30.0 14400 > th dose independent rect. 7 1
98 441.18 wind 5.0 43200 > th dose independent rect. 5 1
103 441.42 radiation 40.0 14400 < th dose dependent rect. 18 2
104 441.47 humidity 80.0 43200 > th dose independent rect. 16 1
114 441.77 radiation 10.0 14400 < th dose independent rect. 14 17
116 441.91 humidity 60.0 43200 < th dose independent rect. 15 1
117 441.91 radiation 1.0 14400 < th dose independent rect. 17 18
131 442.19 radiation 30.0 14400 < th dose dependent rect. 18 5
140 442.39 precipitation 0.1 43200 < th dose independent rect. 16 3
142 442.39 precipitation 0.1 43200 < th dose dependent rect. 16 3
149 442.53 radiation 10.0 14400 < th dose dependent rect. 18 11
154 442.60 precipitation 0.1 43200 > th dose independent rect. 16 3
158 442.65 humidity 90.0 43200 > th dose dependent rect. 19 1
161 442.72 humidity 90.0 43200 < th dose independent sin 22 NA
181 443.03 humidity 90.0 43200 > th dose independent rect. 5 17
201 443.48 precipitation 0.1 43200 < th dose independent rect. 16 6
202 443.48 precipitation 0.1 43200 < th dose dependent rect. 16 6
213 443.75 humidity 90.0 43200 > th dose independent rect. 19 1
219 443.86 precipitation 0.1 43200 > th dose independent rect. 16 6
242 444.28 radiation 10.0 14400 < th dose independent sin 13 NA
245 444.34 radiation 40.0 14400 < th dose independent rect. 6 3
247 444.37 radiation 1.0 14400 > th dose independent rect. 17 18
285 444.85 atmosphere 1005.0 43200 < th dose independent rect. 17 1
287 444.87 radiation 20.0 14400 < th dose independent rect. 5 3
296 445.00 radiation 20.0 14400 < th dose independent rect. 2 6
308 445.09 radiation 40.0 14400 < th dose independent rect. 2 7
311 445.18 radiation 20.0 14400 < th dose independent rect. 22 10
313 445.20 atmosphere 1005.0 43200 > th dose independent rect. 17 1
318 445.25 radiation 20.0 14400 < th dose independent rect. 19 13
359 445.87 radiation 40.0 14400 < th dose independent rect. 21 12
363 445.88 radiation 40.0 14400 < th dose independent rect. 19 14
367 445.94 radiation 1.0 14400 < th dose independent rect. 7 23
384 446.08 humidity 80.0 43200 > th dose dependent rect. 8 12
385 446.09 wind 5.0 43200 < th dose independent rect. 5 9
387 446.10 radiation 1.0 14400 < th dose independent rect. 16 7
395 446.16 radiation 1.0 14400 < th dose independent rect. 16 4
409 446.22 radiation 1.0 14400 < th dose independent rect. 16 11
437 446.36 wind 5.0 43200 > th dose independent rect. 5 9
475 446.84 radiation 1.0 14400 < th dose independent rect. 5 18
478 446.87 radiation 1.0 14400 < th dose independent rect. 5 15
495 447.00 humidity 90.0 43200 > th dose independent rect. 17 4
500 447.02 radiation 1.0 14400 < th dose independent rect. 2 21
511 447.05 radiation 1.0 14400 < th dose independent rect. 2 18
528 447.08 radiation 1.0 14400 > th dose independent sin 11 NA
529 447.09 radiation 1.0 14400 < th dose independent no NA NA
534 447.09 radiation 1.0 14400 < th dose independent rect. 21 23
550 447.16 radiation 1.0 14400 < th dose dependent rect. 16 11
590 447.52 radiation 1.0 14400 < th dose dependent rect. 16 19
607 447.64 radiation 1.0 14400 > th dose independent rect. 7 23
613 447.71 humidity 90.0 43200 > th dose independent sin 22 NA
617 447.73 radiation 1.0 14400 < th dose dependent rect. 16 14
633 447.85 precipitation 0.1 43200 > th dose dependent rect. 14 8
660 448.05 humidity 90.0 43200 > th dose dependent rect. 5 17
677 448.19 radiation 1.0 14400 > th dose independent rect. 16 3
693 448.21 humidity 80.0 43200 < th dose independent rect. 16 1
703 448.27 radiation 1.0 14400 < th dose independent rect. 7 16
709 448.31 radiation 1.0 14400 < th dose independent rect. 7 13
720 448.36 radiation 1.0 14400 < th dose independent rect. 7 20
801 448.83 radiation 1.0 14400 < th dose dependent sin 12 NA
811 448.91 radiation 1.0 14400 < th dose independent rect. 5 6
812 448.91 radiation 1.0 14400 > th dose independent rect. 5 14
842 449.04 humidity 80.0 43200 > th dose independent rect. 10 9
849 449.07 radiation 1.0 14400 > th dose independent rect. 5 6
857 449.13 radiation 1.0 14400 > th dose independent no NA NA
945 449.27 wind 5.0 43200 < th dose independent rect. 8 5
966 449.37 wind 5.0 43200 > th dose independent rect. 8 5