Os10g0553300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Trehalose-6-phosphate phosphatase.
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Os10g0553300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Trehalose-6-phosphate phosphatase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.02 | 0.536 | 7.75 | -0.263 | 2.15 | -1.63 | 0.664 | -0.353 | -0.0489 | 5.29 | 0.008463 | 36 | 5.1 | -- |
| 130.45 | 0.532 | 7.75 | -0.266 | 2.16 | -1.63 | 0.527 | -- | -0.054 | 5.3 | 2.894e-07 | 36 | 5.06 | -- |
| 130.87 | 0.533 | 7.75 | -0.265 | 2.17 | -1.65 | -- | -0.217 | -0.0542 | 5.25 | 0.04934 | 36 | 5.08 | -- |
| 130.91 | 0.533 | 7.76 | -0.268 | 2.18 | -1.66 | -- | -- | -0.06 | 5.26 | 0.01597 | 38 | 5.08 | -- |
| 224.93 | 0.699 | 7.93 | -0.305 | -- | -1.95 | -- | -0.695 | -0.172 | -- | 41.86 | 86 | 10.8 | -- |
| 166.58 | 0.605 | 7.72 | -0.185 | 2.34 | -- | 0.732 | -- | -0.00705 | 8.26 | -- | -- | -- | -- |
| 168.23 | 0.607 | 7.72 | -0.163 | 2.34 | -- | -- | -- | -0.00746 | 8.26 | -- | -- | -- | -- |
| 164.55 | 0.597 | 7.83 | -0.239 | -- | -2.72 | -- | -- | -0.169 | -- | 160.3 | 432 | 13.7 | -- |
| 132.1 | 0.535 | 7.75 | -- | 2.21 | -1.71 | -- | -- | -0.0221 | 5.17 | 0.05 | 47 | 5.26 | -- |
| 472.09 | 1.02 | 7.78 | -0.147 | -- | -- | -- | -- | 0.0187 | -- | -- | -- | -- | -- |
| 168.94 | 0.608 | 7.71 | -- | 2.34 | -- | -- | -- | 0.0107 | 8.26 | -- | -- | -- | -- |
| 163.25 | 0.595 | 7.8 | -- | -- | -2.68 | -- | -- | -0.0618 | -- | 156.8 | 505 | 14.4 | -- |
| 472.66 | 1.01 | 7.77 | -- | -- | -- | -- | -- | 0.035 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 3 | 124.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 4 | 124.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 5 | 124.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 8 | 125.19 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 10 | 125.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 11 | 125.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 19 | 125.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 22 | 125.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 25 | 126.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 30 | 126.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 33 | 126.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 34 | 126.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 35 | 126.40 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 36 | 126.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 43 | 126.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 44 | 126.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 45 | 126.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 46 | 126.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 47 | 126.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 48 | 126.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 49 | 126.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 50 | 126.80 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 55 | 126.80 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 56 | 126.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 57 | 126.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 89 | 127.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 91 | 127.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 92 | 127.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 7 |
| 93 | 127.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 101 | 127.65 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 126 | 128.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 129 | 128.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 133 | 128.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 136 | 128.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 142 | 128.80 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 145 | 128.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 148 | 128.85 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 159 | 129.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 161 | 129.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 182 | 129.39 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 194 | 129.40 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 195 | 129.40 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 204 | 129.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 211 | 129.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 8 |
| 212 | 129.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 213 | 129.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 240 | 129.72 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 248 | 129.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 249 | 129.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 252 | 129.90 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 278 | 130.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 288 | 130.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 296 | 130.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 311 | 130.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 333 | 130.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 335 | 130.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 336 | 130.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 338 | 130.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 339 | 130.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 340 | 130.65 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 341 | 130.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 344 | 130.69 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 349 | 130.80 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 403 | 131.08 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 7 |
| 407 | 131.14 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 408 | 131.16 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 415 | 131.20 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 463 | 131.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 467 | 131.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 470 | 131.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 471 | 131.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 472 | 131.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 474 | 131.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 492 | 131.53 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 531 | 131.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 555 | 131.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 8 |
| 556 | 131.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 8 |
| 558 | 131.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 608 | 132.06 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 622 | 132.15 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 646 | 132.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 647 | 132.29 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 650 | 132.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 654 | 132.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 655 | 132.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 682 | 132.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 684 | 132.37 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 19 |
| 687 | 132.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 689 | 132.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 697 | 132.43 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 716 | 132.52 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 756 | 132.68 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 890 | 133.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 924 | 133.28 | radiation | 1.0 | 30 | > th | dose independent | sin | 11 | NA |
| 972 | 133.45 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 990 | 133.53 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 996 | 133.55 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 13 |