Os06g0222100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAD-superfamily hydrolase subfamily IIB protein.
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Os06g0222100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAD-superfamily hydrolase subfamily IIB protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.29 | 0.653 | 3.23 | 0.1 | 0.185 | -1.09 | 0.294 | -1.71 | 2.01 | 5.99 | 19.7 | 4497 | -- | -- |
| 196.66 | 0.653 | 3.29 | -0.097 | 0.187 | -0.698 | 0.298 | -- | 2 | 5.91 | 19.4 | 4660 | -- | -- |
| 193.34 | 0.648 | 3.23 | 0.0835 | 0.188 | -1.11 | -- | -1.72 | 2.02 | 5.86 | 19.5 | 4436 | -- | -- |
| 196.84 | 0.653 | 3.3 | -0.119 | 0.188 | -0.71 | -- | -- | 1.98 | 5.96 | 19.49 | 4660 | -- | -- |
| 195.05 | 0.65 | 3.24 | 0.0933 | -- | -1.14 | -- | -1.77 | 2.02 | -- | 19.5 | 4395 | -- | -- |
| 204.77 | 0.671 | 3.26 | 0.321 | 0.195 | -- | 0.261 | -- | 2.15 | 5.84 | -- | -- | -- | -- |
| 204.94 | 0.67 | 3.26 | 0.323 | 0.197 | -- | -- | -- | 2.15 | 5.85 | -- | -- | -- | -- |
| 198.63 | 0.656 | 3.3 | -0.114 | -- | -0.731 | -- | -- | 1.97 | -- | 19.45 | 4436 | -- | -- |
| 193.46 | 0.651 | 3.3 | -- | 0.295 | -0.506 | -- | -- | 1.99 | 3.45 | 21.8 | 4396 | -- | -- |
| 206.95 | 0.672 | 3.26 | 0.329 | -- | -- | -- | -- | 2.15 | -- | -- | -- | -- | -- |
| 207.69 | 0.674 | 3.27 | -- | 0.202 | -- | -- | -- | 2.11 | 5.77 | -- | -- | -- | -- |
| 197.59 | 0.655 | 3.31 | -- | -- | -0.558 | -- | -- | 1.97 | -- | 21.7 | 3028 | -- | -- |
| 209.81 | 0.676 | 3.27 | -- | -- | -- | -- | -- | 2.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.76 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 6 |
| 2 | 187.14 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 2 |
| 4 | 187.36 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 7 | 187.87 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 20 | 188.87 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 25 | 189.25 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 32 | 189.73 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 42 | 190.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 45 | 190.11 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 46 | 190.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 48 | 190.13 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 59 | 190.31 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 12 | 22 |
| 74 | 190.51 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 89 | 190.66 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 109 | 190.85 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 134 | 191.09 | wind | 1.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 149 | 191.21 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 162 | 191.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 164 | 191.30 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 186 | 191.45 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 223 | 191.66 | radiation | 30.0 | 90 | < th | dose independent | rect. | 19 | 17 |
| 260 | 191.86 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 263 | 191.87 | temperature | 25.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 286 | 191.94 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 12 | 2 |
| 303 | 192.06 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 9 |
| 339 | 192.19 | temperature | 25.0 | 720 | > th | dose independent | rect. | 13 | 9 |
| 402 | 192.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 408 | 192.39 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 419 | 192.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 427 | 192.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 432 | 192.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 433 | 192.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 451 | 192.49 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 456 | 192.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 457 | 192.50 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 458 | 192.50 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 459 | 192.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 493 | 192.60 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 511 | 192.63 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 512 | 192.64 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 526 | 192.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 528 | 192.66 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 533 | 192.67 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 544 | 192.69 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 556 | 192.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 559 | 192.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 580 | 192.73 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 659 | 192.85 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 660 | 192.85 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 661 | 192.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 668 | 192.86 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 684 | 192.87 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 686 | 192.87 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 698 | 192.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 5 |
| 704 | 192.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 706 | 192.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 731 | 192.93 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 8 |
| 733 | 192.93 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 14 |
| 742 | 192.94 | wind | 5.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 795 | 192.99 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 805 | 193.00 | wind | 5.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 815 | 193.01 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 830 | 193.03 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 834 | 193.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 841 | 193.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 846 | 193.04 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 13 |
| 848 | 193.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 853 | 193.05 | temperature | 20.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 867 | 193.06 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 908 | 193.09 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 912 | 193.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 948 | 193.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 957 | 193.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 990 | 193.16 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 999 | 193.17 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 5 |