Os07g0624600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Trehalose-6-phosphate phosphatase.
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Os07g0624600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Trehalose-6-phosphate phosphatase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.13 | 0.679 | 3.62 | 0.57 | 0.246 | 1.04 | -0.037 | 2.62 | 0.129 | 8.36 | 21.97 | 1205 | -- | -- |
| 224.87 | 0.698 | 3.54 | 1.33 | 0.226 | 0.869 | 0.513 | -- | 0.296 | 9.97 | 22 | 1184 | -- | -- |
| 208.62 | 0.673 | 3.62 | 0.576 | 0.206 | 1.02 | -- | 2.57 | 0.129 | 8.1 | 21.95 | 1095 | -- | -- |
| 225.65 | 0.7 | 3.54 | 1.34 | 0.226 | 0.922 | -- | -- | 0.3 | 8.53 | 22.1 | 1184 | -- | -- |
| 210.87 | 0.676 | 3.63 | 0.586 | -- | 1.04 | -- | 2.56 | 0.138 | -- | 21.94 | 1083 | -- | -- |
| 257.49 | 0.752 | 3.61 | 0.986 | 0.277 | -- | 0.72 | -- | 0.00766 | 11.1 | -- | -- | -- | -- |
| 259.13 | 0.754 | 3.61 | 1.01 | 0.297 | -- | -- | -- | 0.00757 | 9.7 | -- | -- | -- | -- |
| 227.57 | 0.703 | 3.55 | 1.34 | -- | 0.952 | -- | -- | 0.32 | -- | 21.95 | 964 | -- | -- |
| 269.13 | 0.764 | 3.59 | -- | 0.232 | 0.611 | -- | -- | 0.0829 | 8.36 | 22.3 | 1074 | -- | -- |
| 264.37 | 0.76 | 3.61 | 1.01 | -- | -- | -- | -- | 0.008 | -- | -- | -- | -- | -- |
| 286.09 | 0.791 | 3.63 | -- | 0.295 | -- | -- | -- | -0.105 | 9.44 | -- | -- | -- | -- |
| 271.57 | 0.768 | 3.59 | -- | -- | 0.626 | -- | -- | 0.0899 | -- | 22.3 | 892 | -- | -- |
| 291.21 | 0.797 | 3.64 | -- | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 10 | 206.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 21 | 209.11 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 33 | 211.03 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 4 |
| 41 | 212.11 | wind | 3 | 14400 | < th | dose dependent | rect. | 14 | 17 |
| 49 | 212.45 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 50 | 212.49 | temperature | 25 | 1440 | < th | dose dependent | sin | 1 | NA |
| 51 | 212.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 16 |
| 52 | 212.62 | wind | 3 | 14400 | < th | dose dependent | sin | 14 | NA |
| 55 | 212.68 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 72 | 212.98 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 78 | 213.04 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 21 |
| 80 | 213.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 86 | 213.23 | wind | 3 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 106 | 213.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 121 | 213.75 | wind | 1 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 133 | 214.01 | wind | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 178 | 214.63 | wind | 1 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 185 | 214.76 | wind | 1 | 14400 | < th | dose independent | sin | 14 | NA |
| 189 | 214.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 194 | 214.82 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 19 |
| 204 | 214.88 | wind | 1 | 14400 | > th | dose independent | sin | 14 | NA |
| 224 | 215.00 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 19 |
| 235 | 215.13 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 244 | 215.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 254 | 215.24 | wind | 3 | 14400 | < th | dose dependent | rect. | 14 | 22 |
| 276 | 215.34 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 318 | 215.54 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 322 | 215.56 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 328 | 215.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 339 | 215.68 | humidity | 90 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 354 | 215.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 369 | 215.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 425 | 216.02 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 439 | 216.06 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 440 | 216.06 | wind | 3 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 445 | 216.07 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 23 |
| 489 | 216.25 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 517 | 216.42 | wind | 1 | 14400 | > th | dose independent | rect. | 13 | 18 |
| 599 | 216.95 | humidity | 90 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 644 | 217.19 | wind | 1 | 14400 | > th | dose independent | rect. | 3 | 21 |
| 700 | 217.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 9 |
| 750 | 217.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 6 |
| 788 | 217.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 7 |
| 815 | 217.90 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 820 | 217.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 14 |
| 837 | 217.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 893 | 218.13 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 904 | 218.16 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 20 |
| 905 | 218.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 971 | 218.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 996 | 218.39 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 23 |