BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0558000 Os07g0558000|AK101867
(623 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0558000 ABC-1 domain containing protein 1204 0.0
Os04g0660200 ABC-1 domain containing protein 674 0.0
Os09g0250700 ABC-1 domain containing protein 125 8e-29
Os02g0575500 Similar to ABC transporter-like 124 2e-28
Os04g0640500 ABC-1 domain containing protein 112 1e-24
Os11g0216300 ABC-1 domain containing protein 107 4e-23
Os01g0904200 Protein kinase-like domain containing protein 103 4e-22
Os02g0805800 ABC-1 domain containing protein 100 3e-21
Os06g0701300 Beta-lactamase family protein 94 3e-19
Os03g0698350 ABC-1 domain containing protein 75 1e-13
>Os07g0558000 ABC-1 domain containing protein
Length = 623
Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/623 (94%), Positives = 588/623 (94%)
Query: 1 MLRLVGIGERLLAVGTNRRAAYFSQPSHRSGYYTAARDNGLSAKRKIPTVFSRMFSHYKV 60
MLRLVGIGERLLAVGTNRRAAYFSQPSHRSGYYTAARDNGLSAKRKIPTVFSRMFSHYKV
Sbjct: 1 MLRLVGIGERLLAVGTNRRAAYFSQPSHRSGYYTAARDNGLSAKRKIPTVFSRMFSHYKV 60
Query: 61 IVRKNKAGDHKCRNRISRGFRTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRA 120
IVRKNKAGDHKCRNRISRGFRTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRA
Sbjct: 61 IVRKNKAGDHKCRNRISRGFRTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRA 120
Query: 121 ACALSFSFTRFHVVPGVMALAFGKFALSRPVLADSPHLPTMEGIVTNARDTRQFLSSIVW 180
ACALSFSFTRFHVVPGVMALAFGKFALSRPVLADSPHLPTMEGIVTNARDTRQFLSSIVW
Sbjct: 121 ACALSFSFTRFHVVPGVMALAFGKFALSRPVLADSPHLPTMEGIVTNARDTRQFLSSIVW 180
Query: 181 SIWEGVTLLIRAVHLAILFFPATALSPFADTFSVGFXXXXXXXXXXXXEIAGPAFIKWGQ 240
SIWEGVTLLIRAVHLAILFFPATALSPFADTFSVGF EIAGPAFIKWGQ
Sbjct: 181 SIWEGVTLLIRAVHLAILFFPATALSPFADTFSVGFRRRWLRLVRRTLEIAGPAFIKWGQ 240
Query: 241 WAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEEPVASGS 300
WAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEEPVASGS
Sbjct: 241 WAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEEPVASGS 300
Query: 301 IAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSWLRLDESV 360
IAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSWLRLDESV
Sbjct: 301 IAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSWLRLDESV 360
Query: 361 RQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVETFENGESVSR 420
RQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVETFENGESVSR
Sbjct: 361 RQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVETFENGESVSR 420
Query: 421 FMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNEXXXXXXXXXXXX 480
FMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNE
Sbjct: 421 FMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNERKPKRKLFFRPK 480
Query: 481 XHIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTLQLSKQQSCPNPVAFIEEL 540
HIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTLQLSKQQSCPNPVAFIEEL
Sbjct: 481 PHIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTLQLSKQQSCPNPVAFIEEL 540
Query: 541 DKTFSFWGTPEGDIFHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGWQRKLDPGF 600
DKTFSFWGTPEGDIFHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGWQRKLDPGF
Sbjct: 541 DKTFSFWGTPEGDIFHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGWQRKLDPGF 600
Query: 601 DIMHXXXXXXXXXXIKQPVDFFS 623
DIMH IKQPVDFFS
Sbjct: 601 DIMHTLKTLLLDKDIKQPVDFFS 623
>Os04g0660200 ABC-1 domain containing protein
Length = 629
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/543 (59%), Positives = 409/543 (75%), Gaps = 8/543 (1%)
Query: 66 KAGDHKCRNRISRGFRTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRAACALS 125
+A + RN +R F S N+ H QLAWK+L + P++SR ACA+S
Sbjct: 64 RAKESLYRNPAARNFSVLSTCSQNAF---HGQLAWKQLMTIGSHVPKASPILSRVACAIS 120
Query: 126 FSFTRFHVVPGVMALAFGKFALSRPVLADSPHLPTMEGIVTNARDTRQFLSSIVWSIWEG 185
+ TR ++VP + A G+ L++ AD +LP + + T A+D R +++S+++S E
Sbjct: 121 LAATRSNLVPYLFAFVAGEIMLAQKTSADGEYLPIRDSLYTRAQDGRIYVTSLIFSAVEL 180
Query: 186 VTLLIRAVHLAILFFPATALSPFADTFSVGFXXXXXXXXXXXXEIAGPAFIKWGQWAATR 245
V ++ R+++LA+LF P+ ++PFADT + E AGPAFIKWGQWAATR
Sbjct: 181 VIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAATR 240
Query: 246 PDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEEPVASGSIAQVH 305
PDLF SDLC EL+KLH+ APAH FAY+K T+EKAFGRKLS++FE FEEEPVASGS+AQVH
Sbjct: 241 PDLFESDLCAELSKLHTKAPAHSFAYTKKTVEKAFGRKLSDLFENFEEEPVASGSVAQVH 300
Query: 306 RATLRDQHTEKH-----VAVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSWLRLDESV 360
RA LR ++ +H VAVKVRHPGVGESI++DF +IN +AK S +P L+WLRLDESV
Sbjct: 301 RAGLRFRYPGQHIKRVTVAVKVRHPGVGESIRRDFTIINAVAKISRYIPTLNWLRLDESV 360
Query: 361 RQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVETFENGESVSR 420
+QFAVFMMSQVDL+REAAHLSRFIYNFRRW+ VSFPKPLYPLVHP+VLVET+E GESV+
Sbjct: 361 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPLYPLVHPAVLVETYEQGESVAH 420
Query: 421 FMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNEXXXXXXXXXXXX 480
++D+++G+ R+K LAHIGT+A LKMLL DNF+HADMHPGNILVR+ +
Sbjct: 421 YVDDLDGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVIQPRNSNNTLLKSR 480
Query: 481 XHIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTLQLSKQQSCPNPVAFIEEL 540
H+VFLDVGMTAEL+ +DR NL +FFKAVA RDGRTAA TL+LSKQQ+CPNP AFIEE+
Sbjct: 481 PHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAERTLRLSKQQNCPNPKAFIEEV 540
Query: 541 DKTFSFWGTPEGDIFHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGWQRKLDPGF 600
+++FSFWGT EGD HP ECMHQLL+ VRRHKVNIDGN+CTVMVT LVLEGWQRKLDP +
Sbjct: 541 ERSFSFWGTSEGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDY 600
Query: 601 DIM 603
++M
Sbjct: 601 NVM 603
>Os09g0250700 ABC-1 domain containing protein
Length = 716
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 25/304 (8%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETF 291
GP FIK GQ ++TR DLFP + ELAKL PA +KA IEK G + +++ F
Sbjct: 220 GPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKAFIEKEMGCPIEVVYKEF 279
Query: 292 EEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLA---KASNVV 348
+ P+A+ S+ QVHRA L H + VAVKV+ PG+ + D + L+A ++S
Sbjct: 280 DNRPIAAASLGQVHRAVL---HNGERVAVKVQRPGLRKLFDIDLRNLKLVAEYFQSSEAF 336
Query: 349 PGLS--WLRLDESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPS 406
G S W+ + E + + ++D E + RF +FR + V P ++
Sbjct: 337 GGPSRDWIGIYEECSK---ILYEEIDYINEGKNADRFRRDFRNIKWVRVPLIMWDYTTEK 393
Query: 407 VLVETFENGESVSRFMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRL 466
VL + G ++ + ++ + +A ++L +L+ F HAD HPGN+ +
Sbjct: 394 VLTLEYVPGIKINN-LTLLDNRGYSRSLIASRSIESYLIQILKTGFFHADPHPGNLAIDT 452
Query: 467 NEXXXXXXXXXXXXXHIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTLQLSK 526
+ +++ D GM E+ R+ L F AV +D + L
Sbjct: 453 D-------------GSLIYYDFGMMGEIKSFTRERLLSLFYAVYEKDANKVMKALIDLEA 499
Query: 527 QQSC 530
Q+
Sbjct: 500 LQAT 503
>Os02g0575500 Similar to ABC transporter-like
Length = 763
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 31/303 (10%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETF 291
GP FIK GQ +TR D+ P + +L++L P + + IE+ G +++IF+ F
Sbjct: 234 GPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAVSIIEEELGASVNKIFDRF 293
Query: 292 EEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGL 351
+ EP+A+ S+ QVHRA L K V +KV+ PG+ E D + ++A+ V
Sbjct: 294 DFEPIAAASLGQVHRACLNG----KEVVIKVQRPGLKELFDIDLKNLRVIAEYLQKVDPK 349
Query: 352 S------WLRLDESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHP 405
S W+ + + + A + ++D ++EA + +F NF+ +V P+ L+ P
Sbjct: 350 SDGAKRDWVAIYD---ECASVLYQEIDYTKEAFNAEKFSENFKNMDYVKVPEILWEYTTP 406
Query: 406 SVLVETFENGESVSRFMDEIEGNARMKRDLAHIGTYA---FLKMLLEDNFIHADMHPGNI 462
VL + G ++R I+ ++ D +G YA +L+ +L F HAD HPGNI
Sbjct: 407 QVLTMEYVPGIKINR----IKQLDKLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNI 462
Query: 463 LVRLNEXXXXXXXXXXXXXHIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTL 522
V ++F D GM ++ + R+ L + F V +D +
Sbjct: 463 AV-----------DDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQSMI 511
Query: 523 QLS 525
Q+
Sbjct: 512 QMG 514
>Os04g0640500 ABC-1 domain containing protein
Length = 720
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 160/380 (42%), Gaps = 41/380 (10%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETF 291
GP F+K Q ++RPD+ P EL+ L + IE G L IF
Sbjct: 145 GPTFVKIAQAVSSRPDVIPPAYLDELSLLQDRIAPFSTEVAFNIIETELGLPLDMIFSEI 204
Query: 292 EEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGL 351
EPVA+ S+ QV++A LR K VAVKV+ PGV +I D ++ LA + L
Sbjct: 205 SPEPVAAASLGQVYQARLRSNR--KVVAVKVQRPGVQAAISLDIYILRFLAGVARKAGKL 262
Query: 352 SWLRLDESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVET 411
+ L + ++A + ++D EA +F + ++R V P+ VL+
Sbjct: 263 NT-DLQAVLDEWASSLFREMDYRAEARSGLKFRELYGKFRDVLVPEMYLEQTRRRVLIME 321
Query: 412 FENGESVSRFMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNEXXX 471
+ GE +S D+ L +G Y L LLE F HAD HPGN+L ++
Sbjct: 322 WVEGEKLSEVRDQY---------LVEVGVYCSLSQLLEYGFYHADPHPGNLLRTVD---- 368
Query: 472 XXXXXXXXXXHIVFLDVGMTAELTRDDRDNLQQFFKAVATR--DGRTAANCTLQLSKQQS 529
+ +LD GM E ++ RD + + R DG TL L
Sbjct: 369 ---------GKLAYLDFGMMGEFRQELRDGFIEACLHLVNRDFDGLAKDFVTLGL----- 414
Query: 530 CPNPVAFIEELDKTFSFWGTPEGDIFHPVECMH------QLLDTVRRHKVNIDGNICTVM 583
P P A +E+ K + G + + V+ + L T+ + K I V+
Sbjct: 415 LP-PTAQKDEVTKALT--GVFQNAVDRGVQNISFGDLSGNLGRTMYKFKFQIPSYFSLVI 471
Query: 584 VTILVLEGWQRKLDPGFDIM 603
++ VLEG +P + ++
Sbjct: 472 RSLAVLEGIAISFNPNYKVL 491
>Os11g0216300 ABC-1 domain containing protein
Length = 734
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETF 291
GP+FIK GQ A RPD+ D EL L P + + IE+ G+ L +F
Sbjct: 220 GPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNQVAFSIIEEELGQPLERLFSRI 279
Query: 292 EEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGL 351
+A+ S+ QV+RATLR+ T + VA+KV+ PG+ I +D L LA N G+
Sbjct: 280 SSRTIAAASLGQVYRATLRE--TGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLN---GI 334
Query: 352 SWLRLDES----VRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSV 407
S +L + V +F ++ ++D + EA ++ F+ NF+ V P+ V
Sbjct: 335 SLQKLGCNAELIVDEFGEKLLEELDYTLEATNIEDFLENFKDDPTVKIPQVYKQYSGSRV 394
Query: 408 LVETFENG------ESVSRFMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGN 461
LV + +G +++ ++EG +G A L+ LLE H D HPGN
Sbjct: 395 LVMEWIDGIRCTDPQAIKEAGIDVEG-------FLTVGVSAALRQLLEFGLFHGDPHPGN 447
Query: 462 ILVRLNEXXXXXXXXXXXXXHIVFLDVGMTAELTRDDRDNL 502
I + I ++D G A L++ ++ L
Sbjct: 448 IFAMRD-------------GRIAYVDFGNVAVLSQQNKQIL 475
>Os01g0904200 Protein kinase-like domain containing protein
Length = 487
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETF 291
G F+K Q +PDL P L L APA + +EK FG+ +IFE F
Sbjct: 78 GGLFLKAAQILG-KPDLAPMAWVKRLVTLCDNAPATPIDVVRDVVEKQFGKSFDDIFECF 136
Query: 292 EEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGL 351
+ EPV S SIAQVHRA L+ T+ VAVKV+HPG + + D + N+ A A +
Sbjct: 137 DVEPVGSASIAQVHRARLKLSKTD--VAVKVQHPGAEKLMMVD--IRNMQAFALFLQKYD 192
Query: 352 SWLRLDESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLVHP-----S 406
L + ++ + + D REA + R I F R + P + P V P
Sbjct: 193 INFDLYSATKEMEKQICYEFDFVREAKAMER-IREFLRVTNKKKPPVIVPRVIPEMVSRE 251
Query: 407 VLVETFENGESVSRFMDEIEGNARMKRDLAHIG--------------TYAFLKMLLEDNF 452
VLV F G + GN KR + G T A+ +M+L+D F
Sbjct: 252 VLVMEFIEGTPIMNL-----GNEMAKRGIDPGGKIATMAKQKILTDLTLAYGQMILKDGF 306
Query: 453 IHADMHPGNILVRLNEXXXXXXXXXXXXXHIVFLDVGMTAELTRDDRDNLQQFFKAVATR 512
HAD HPGNIL+ N + LD G + D R A+A
Sbjct: 307 FHADPHPGNILICKN-------------TEVALLDYGQVKAMPEDLRLAYANLVIAMADD 353
Query: 513 D 513
D
Sbjct: 354 D 354
>Os02g0805800 ABC-1 domain containing protein
Length = 961
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 37/255 (14%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETF 291
GP F+K GQ +TRPD+ S++ LA+LH P + IE F +S IF
Sbjct: 327 GPTFVKVGQSLSTRPDITGSEISEALAELHEKVPPFPRKDAMKIIEGEFELPVSHIFSYI 386
Query: 292 EEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGL 351
+EPVA+ S QV++ D VA+KV+ P + S+ +D ++ L GL
Sbjct: 387 SDEPVAAASFGQVYQGRTVDGAL---VAIKVQRPNLLPSVLRDIYILRL---------GL 434
Query: 352 SWLR-LDESVRQFAVF-------MMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPLV 403
S++R + + A++ ++ ++D + EAA+ ++F+ R+ + PK L L
Sbjct: 435 SFVRKVAKRKSNIALYADELGKGLVGELDYNIEAANATKFLEYHSRYSFMLVPKVLKQLT 494
Query: 404 HPSVLVETFENGESVSRFM----------------DEIEGNARMKRDLAHIGTYAFLKML 447
VL + +GE+ + + +IE AR+ DL + G A L L
Sbjct: 495 RRRVLTMEWVSGENPTDLLSLSKGISSEIAESSEKQKIEATARL-LDLVNKGVEASLVQL 553
Query: 448 LEDNFIHADMHPGNI 462
LE +HAD HPGN+
Sbjct: 554 LETGLLHADPHPGNL 568
>Os06g0701300 Beta-lactamase family protein
Length = 632
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 235 FIKWGQWAATRPDLFPSDLCVELAKLHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEE 294
++K GQ+ +TR D+ P L +L + P + TIEK G+ ++++F F +
Sbjct: 65 WVKMGQYLSTRADVLPEPYINVLKQLQDSLPPRPLEEVRGTIEKELGKPMNDLFANFVLD 124
Query: 295 PVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSW- 353
P+A+ SIAQVHRATL D + V VK++H G+ + I +D L A ++V ++W
Sbjct: 125 PLATASIAQVHRATLVDG---REVVVKIQHDGIKDIILED------LKNAKSLVEWIAWA 175
Query: 354 ---LRLDESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHV------SFPKPLYPLVH 404
+ + ++ ++D + EA + N R + S L P V
Sbjct: 176 EPQYNFNPMIDEWCKEAPKELDFNHEAENTKAVSSNLSRKTNCESGAVSSAVDVLIPEVI 235
Query: 405 PS---VLVETFENGESVSRFMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGN 461
S VL+ + +G ++ D +E K+ L T A+ + D F + D HPGN
Sbjct: 236 QSTDKVLILQYMDGIRLND-NDSLEAYGVDKQRLVEEITRAYAHQIYVDGFFNGDPHPGN 294
Query: 462 ILVRLNEXXXXXXXXXXXXXHIVFLDVGMTAELTRDDRDNLQQFFKAVATRD 513
LV + LD G+T +++ R L + F + A D
Sbjct: 295 FLV-----------SKEPPHKPILLDFGLTKRISQSMRQALAKMFLSCAEGD 335
>Os03g0698350 ABC-1 domain containing protein
Length = 429
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 15/300 (5%)
Query: 232 GPAFIKWGQWAATRPDLFPSDLCVEL-AKLHSAAPAHGFAYSKATIEKAFGRKLSEIFET 290
G +IK GQ A + P + + A + P + K G +F
Sbjct: 92 GGIYIKLGQHIAQLEYVVPEEYVQTMRASMLKRCPVSSYEQVCRVFGKDMGESPETVFVE 151
Query: 291 FEEEPVASGSIAQVHRATLRDQHTEKHVAVKVRHPGVGESIKKDFLLINLLAKASNVV-P 349
F+ P+AS S+AQVH A H + VAVKV+H + ++ D + L+ + + P
Sbjct: 152 FDPVPLASASLAQVHAAR---THDGQKVAVKVQHDHLTDTSVIDIATVGLIVNTLHYIFP 208
Query: 350 GLSWLRLDESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWR-HVS----FPKPLYPLVH 404
+ L + +R+ A ++D EA + + + NFRR H++ PK + L
Sbjct: 209 SFDYRWLVDEIRESAP---KELDFLNEAKNSEKCVQNFRRLSPHIAGSIYVPKVYWTLSS 265
Query: 405 PSVLVETFENGESVSRFMDEIEGNARMKRDLAHIGTYAFLKMLLEDNFIHADMHPGNILV 464
+L F + + V+ E R D++++ + AF +M+ + F+H D H N+++
Sbjct: 266 SRILTMEFMDAKEVTDVKGIKELGIR-PVDVSNLVSKAFSEMIFKHGFVHCDPHAANMMI 324
Query: 465 RLNEXXXXXXXXXXXXXHIVFLDVGMTAELTRDDRDNLQQFFKAVATRDGRTAANCTLQL 524
R ++ LD G+ EL R + +KA+ D ++ +++L
Sbjct: 325 R-PLPQDSKKTFGWRRPQLILLDHGLYKELDYATRISYASLWKALVFADEKSIKENSVKL 383
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,457,131
Number of extensions: 754883
Number of successful extensions: 2281
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2259
Number of HSP's successfully gapped: 10
Length of query: 623
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 516
Effective length of database: 11,448,903
Effective search space: 5907633948
Effective search space used: 5907633948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 159 (65.9 bits)