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Os02g0575500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ABC transporter-like.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14 (0.0185) R2 : 0.824
β1 : -1.49 (0.0676) R2dD : 0.196 R2D : 0.142
β2 : 1.96 (0.0481) R2dC : 0.641 R2C : 0.603
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.428 (0.0394) R2dN8 : 0.061 R2N8 : -0.000508
σ : 0.347
deviance : 54.87
__
_____
C
peak time of C : 5.58
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.89 0.325 14 -1.53 2.05 0.435 0.6 0.0527 -0.428 4.85 16.1 20 -- --
47.9 0.322 14 -1.52 2.05 0.433 0.583 -- -0.427 4.86 16.12 19 -- --
48.77 0.325 14 -1.54 2.06 0.427 -- -0.0358 -0.441 4.86 16.1 19 -- --
48.76 0.325 14 -1.53 2.05 0.426 -- -- -0.432 4.87 16.12 19 -- --
252.12 0.74 14 -1.46 -- -0.212 -- -0.111 -0.365 -- 27.25 58 -- --
54.2 0.345 14 -1.5 1.95 -- 0.52 -- -0.425 5.58 -- -- -- --
54.87 0.347 14 -1.49 1.96 -- -- -- -0.428 5.58 -- -- -- --
73.52 0.399 13.9 -1.02 -- -1.96 -- -- -0.153 -- 0.6854 674 -- --
108.65 0.485 14 -- 2.01 0.412 -- -- -0.265 4.99 19.86 18 -- --
253.62 0.744 14 -1.43 -- -- -- -- -0.38 -- -- -- -- --
113.76 0.499 14 -- 1.93 -- -- -- -0.261 5.62 -- -- -- --
106.27 0.48 13.9 -- -- -2.41 -- -- -0.121 -- 7.058e-07 723 -- --
307.66 0.819 14 -- -- -- -- -- -0.222 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.35 temperature 10.0 270 > th dose dependent rect. 19 8
8 37.48 temperature 10.0 270 > th dose dependent rect. 19 17
23 38.85 temperature 10.0 10 > th dose dependent rect. 21 17
26 38.95 temperature 20.0 270 > th dose independent rect. 19 18
37 39.32 temperature 20.0 270 > th dose independent rect. 19 7
39 39.41 atmosphere 995.0 270 > th dose independent rect. 14 17
48 39.64 temperature 20.0 90 > th dose independent rect. 21 17
49 39.64 temperature 30.0 270 < th dose dependent rect. 23 8
59 39.81 atmosphere 995.0 270 > th dose independent rect. 3 15
84 40.22 temperature 20.0 270 > th dose independent rect. 8 17
93 40.30 atmosphere 1000.0 10 > th dose independent rect. 16 16
96 40.32 atmosphere 1000.0 10 > th dose independent rect. 14 20
114 40.55 radiation 1.0 270 > th dose independent rect. 7 7
115 40.55 humidity 60.0 270 > th dose independent rect. 18 9
124 40.63 wind 9.0 270 < th dose independent rect. 7 7
125 40.63 temperature 15.0 270 > th dose independent rect. 7 7
126 40.63 precipitation 0.1 270 < th dose independent rect. 7 7
127 40.63 precipitation 0.1 270 < th dose dependent rect. 7 7
130 40.66 atmosphere 995.0 270 > th dose independent rect. 7 7
131 40.66 atmosphere 1015.0 270 < th dose independent rect. 7 7
132 40.66 temperature 10.0 270 > th dose independent rect. 14 17
141 40.75 wind 9.0 270 < th dose independent rect. 18 9
143 40.75 radiation 1.0 270 < th dose dependent rect. 18 9
146 40.76 radiation 20.0 270 < th dose independent rect. 18 9
149 40.76 temperature 10.0 270 > th dose independent rect. 3 15
150 40.76 atmosphere 1015.0 270 < th dose independent rect. 3 15
151 40.77 radiation 20.0 270 < th dose dependent rect. 18 9
163 40.86 temperature 30.0 270 < th dose independent rect. 18 9
167 40.90 atmosphere 995.0 270 > th dose independent rect. 13 6
175 40.96 precipitation 0.1 270 < th dose independent rect. 18 9
177 40.96 wind 9.0 270 < th dose independent rect. 14 17
178 40.96 precipitation 0.1 270 < th dose dependent rect. 18 9
183 41.03 radiation 40.0 270 < th dose independent rect. 14 17
186 41.07 atmosphere 1000.0 10 > th dose independent rect. 14 7
200 41.19 atmosphere 995.0 270 > th dose dependent rect. 12 8
203 41.21 atmosphere 995.0 270 > th dose independent rect. 18 9
204 41.21 precipitation 0.1 270 < th dose independent rect. 14 17
205 41.21 precipitation 0.1 270 < th dose dependent rect. 14 17
207 41.23 atmosphere 995.0 270 > th dose dependent rect. 13 6
210 41.26 wind 1.0 270 > th dose independent rect. 7 7
213 41.28 precipitation 0.1 270 < th dose independent rect. 3 15
214 41.28 precipitation 0.1 270 < th dose dependent rect. 3 15
220 41.31 wind 9.0 270 < th dose independent rect. 3 15
221 41.31 atmosphere 1015.0 270 < th dose independent rect. 19 18
234 41.39 radiation 1.0 270 > th dose independent rect. 14 17
255 41.52 atmosphere 1015.0 270 < th dose independent rect. 8 15
266 41.59 atmosphere 1015.0 270 < th dose independent rect. 18 9
285 41.72 atmosphere 995.0 270 > th dose independent rect. 14 4
287 41.73 radiation 1.0 270 < th dose dependent sin 14 NA
300 41.81 atmosphere 995.0 10 > th dose dependent rect. 14 7
319 41.90 humidity 50.0 270 > th dose independent rect. 7 7
335 41.95 atmosphere 995.0 10 > th dose dependent rect. 14 18
362 42.08 wind 9.0 270 < th dose independent rect. 8 15
364 42.08 atmosphere 995.0 270 > th dose dependent rect. 13 18
369 42.13 wind 9.0 270 < th dose independent rect. 19 18
373 42.14 temperature 10.0 270 > th dose independent rect. 13 6
376 42.14 atmosphere 1010.0 270 < th dose independent rect. 13 6
381 42.14 atmosphere 995.0 270 > th dose independent rect. 19 18
402 42.25 wind 7.0 270 < th dose independent rect. 23 9
405 42.26 temperature 10.0 270 > th dose independent rect. 23 9
406 42.26 temperature 30.0 270 < th dose independent rect. 23 9
407 42.26 humidity 50.0 270 > th dose independent rect. 23 9
409 42.26 atmosphere 995.0 270 > th dose independent rect. 23 9
416 42.27 precipitation 0.1 270 < th dose independent rect. 19 18
419 42.27 precipitation 0.1 270 < th dose dependent rect. 19 18
423 42.30 radiation 40.0 270 < th dose independent rect. 23 9
434 42.33 precipitation 0.1 270 < th dose independent rect. 23 9
438 42.33 precipitation 0.1 270 < th dose dependent rect. 23 9
444 42.37 atmosphere 1015.0 10 < th dose independent rect. 21 17
448 42.38 precipitation 0.1 270 < th dose independent rect. 8 15
449 42.38 atmosphere 1015.0 270 < th dose independent rect. 18 20
451 42.38 precipitation 0.1 270 < th dose dependent rect. 8 15
458 42.41 wind 9.0 270 < th dose independent rect. 13 6
477 42.44 precipitation 0.1 270 < th dose independent rect. 13 6
480 42.44 precipitation 0.1 270 < th dose dependent rect. 13 6
481 42.45 wind 1.0 270 > th dose independent rect. 13 6
523 42.52 radiation 1.0 270 < th dose independent sin 14 NA
525 42.52 atmosphere 1000.0 10 > th dose independent rect. 12 22
556 42.57 radiation 1.0 270 > th dose independent sin 14 NA
559 42.58 wind 1.0 270 > th dose independent rect. 14 17
596 42.65 wind 1.0 270 > th dose independent rect. 1 7
605 42.66 atmosphere 995.0 10 > th dose dependent rect. 16 16
609 42.67 wind 1.0 270 > th dose independent rect. 18 9
612 42.68 temperature 20.0 270 > th dose independent rect. 14 4
621 42.70 wind 9.0 270 < th dose independent rect. 8 17
655 42.77 radiation 20.0 30 < th dose independent rect. 16 18
674 42.80 wind 1.0 270 > th dose independent rect. 14 4
685 42.81 wind 9.0 270 < th dose independent rect. 18 20
691 42.83 temperature 10.0 270 > th dose independent rect. 14 4
693 42.83 atmosphere 1010.0 270 < th dose independent rect. 14 4
696 42.83 radiation 40.0 10 < th dose independent rect. 14 7
707 42.85 wind 7.0 270 < th dose independent rect. 1 7
717 42.86 precipitation 0.1 270 < th dose independent rect. 18 20
719 42.86 precipitation 0.1 270 < th dose dependent rect. 18 20
726 42.88 temperature 10.0 270 > th dose independent rect. 1 7
728 42.88 temperature 30.0 270 < th dose independent rect. 1 7
729 42.88 humidity 50.0 270 > th dose independent rect. 1 7
731 42.88 atmosphere 995.0 270 > th dose independent rect. 1 7
732 42.88 atmosphere 1015.0 270 < th dose independent rect. 1 7
739 42.89 humidity 50.0 270 > th dose independent rect. 19 18
747 42.91 radiation 40.0 270 < th dose independent rect. 1 7
748 42.91 precipitation 0.1 270 < th dose independent rect. 1 7
750 42.91 precipitation 0.1 270 < th dose dependent rect. 1 7
760 42.93 precipitation 0.1 10 < th dose independent rect. 14 7
761 42.93 temperature 20.0 10 > th dose independent rect. 10 15
764 42.93 precipitation 0.1 10 < th dose dependent rect. 14 7
807 42.98 radiation 1.0 270 < th dose dependent rect. 6 21
811 43.00 temperature 10.0 10 > th dose independent rect. 14 7
813 43.00 atmosphere 1010.0 10 < th dose independent rect. 14 7
817 43.00 atmosphere 995.0 10 > th dose independent rect. 21 17
818 43.01 wind 1.0 10 > th dose independent rect. 14 7
819 43.01 wind 9.0 10 < th dose independent rect. 21 17
822 43.02 radiation 40.0 270 < th dose independent rect. 14 4
824 43.02 precipitation 0.1 270 < th dose independent rect. 8 17
829 43.02 precipitation 0.1 270 < th dose dependent rect. 8 17
834 43.04 wind 1.0 10 > th dose independent rect. 8 8
840 43.05 precipitation 0.1 270 < th dose independent rect. 14 4
843 43.05 precipitation 0.1 270 < th dose dependent rect. 14 4
862 43.08 wind 1.0 270 > th dose independent rect. 8 15
866 43.09 wind 9.0 270 < th dose independent rect. 14 4
881 43.10 atmosphere 995.0 270 > th dose independent rect. 18 20
902 43.13 wind 9.0 30 < th dose independent rect. 14 7
917 43.15 wind 9.0 270 < th dose dependent rect. 7 7
920 43.16 temperature 10.0 10 > th dose independent rect. 8 8
923 43.16 atmosphere 1015.0 10 < th dose independent rect. 8 8
924 43.16 precipitation 0.1 10 < th dose independent rect. 8 8
926 43.16 temperature 10.0 10 > th dose independent rect. 16 16
930 43.16 precipitation 0.1 10 < th dose dependent rect. 8 8
941 43.18 temperature 10.0 1440 > th dose independent rect. 15 7
944 43.18 temperature 10.0 1440 > th dose independent rect. 22 17
954 43.19 radiation 40.0 10 < th dose independent rect. 16 16
972 43.21 radiation 40.0 10 < th dose dependent rect. 16 18