Os09g0250700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC-1 domain containing protein.
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Os09g0250700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC-1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.65 | 0.644 | 12.4 | -1.49 | 4.2 | -1.36 | 1.64 | -0.433 | -0.695 | 10.8 | 74 | 1219 | -- | -- |
| 187.64 | 0.638 | 12.4 | -1.52 | 4.31 | -1.4 | 1.53 | -- | -0.693 | 10.8 | 74 | 1153 | -- | -- |
| 198.05 | 0.655 | 12.4 | -1.51 | 4.22 | -1.37 | -- | 0.156 | -0.71 | 10.8 | 73.95 | 1197 | -- | -- |
| 197.7 | 0.655 | 12.4 | -1.48 | 4.31 | -1.4 | -- | -- | -0.698 | 10.7 | 74 | 1150 | -- | -- |
| 912.19 | 1.41 | 12.4 | -1.44 | -- | -1.66 | -- | -0.171 | -0.562 | -- | 73.95 | 1197 | -- | -- |
| 249.16 | 0.74 | 12.3 | -1.3 | 3.9 | -- | 1.38 | -- | -0.534 | 10.6 | -- | -- | -- | -- |
| 257.03 | 0.751 | 12.3 | -1.24 | 3.9 | -- | -- | -- | -0.53 | 10.6 | -- | -- | -- | -- |
| 912.36 | 1.41 | 12.4 | -1.45 | -- | -1.66 | -- | -- | -0.564 | -- | 73.14 | 1549 | -- | -- |
| 253.09 | 0.741 | 12.3 | -- | 4.42 | -1.29 | -- | -- | -0.505 | 10.7 | 73.82 | 1049 | -- | -- |
| 1192.13 | 1.61 | 12.4 | -1.31 | -- | -- | -- | -- | -0.549 | -- | -- | -- | -- | -- |
| 297.67 | 0.807 | 12.3 | -- | 3.91 | -- | -- | -- | -0.392 | 10.6 | -- | -- | -- | -- |
| 967.53 | 1.45 | 12.4 | -- | -- | -1.63 | -- | -- | -0.403 | -- | 73.1 | 1551 | -- | -- |
| 1237.69 | 1.64 | 12.4 | -- | -- | -- | -- | -- | -0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.95 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 9 |
| 3 | 190.63 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 4 | 190.71 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 7 | 191.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 17 | 191.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 21 | 192.11 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 24 | 192.15 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 31 | 192.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 47 | 192.79 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 91 | 194.21 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 103 | 194.42 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 117 | 194.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 146 | 195.40 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 152 | 195.48 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 175 | 195.89 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 188 | 196.19 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 17 |
| 189 | 196.20 | humidity | 60 | 720 | > th | dose dependent | sin | 17 | NA |
| 221 | 196.51 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 242 | 196.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 249 | 196.74 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 264 | 196.85 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 3 |
| 315 | 197.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 321 | 197.31 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 342 | 197.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 402 | 197.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 404 | 197.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 405 | 197.77 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 434 | 197.81 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 470 | 197.83 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 493 | 197.86 | humidity | 90 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 516 | 197.96 | humidity | 60 | 1440 | > th | dose dependent | rect. | 7 | 13 |
| 539 | 198.13 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 16 |
| 545 | 198.14 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 555 | 198.17 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 557 | 198.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 561 | 198.19 | humidity | 50 | 1440 | > th | dose dependent | sin | 0 | NA |
| 562 | 198.20 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 589 | 198.33 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 10 |
| 640 | 198.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 698 | 198.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 709 | 198.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 15 |
| 748 | 198.79 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 783 | 198.87 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 802 | 198.89 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 833 | 198.93 | humidity | 90 | 720 | < th | dose dependent | sin | 16 | NA |
| 867 | 198.97 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 890 | 199.02 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 921 | 199.10 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 930 | 199.12 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 963 | 199.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 7 |