Os04g0660200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC-1 domain containing protein.
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Os04g0660200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC-1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.1 | 0.329 | 9.4 | 0.802 | 0.987 | -0.406 | -0.0443 | 8.4 | -0.152 | 8.99 | 28.28 | 1823 | -- | -- |
| 53.12 | 0.339 | 9.55 | -0.6 | 1 | 0.479 | -0.156 | -- | -0.256 | 8.99 | 29.9 | 2868 | -- | -- |
| 49.1 | 0.326 | 9.39 | 0.827 | 0.987 | -0.444 | -- | 8.74 | -0.155 | 8.99 | 28.4 | 1830 | -- | -- |
| 53.08 | 0.339 | 9.56 | -0.644 | 0.998 | 0.472 | -- | -- | -0.277 | 9.05 | 30.1 | 2788 | -- | -- |
| 103.07 | 0.473 | 9.37 | 1.4 | -- | -0.909 | -- | 10.6 | -0.0368 | -- | 27.74 | 2149 | -- | -- |
| 62.08 | 0.369 | 9.58 | -0.514 | 0.979 | -- | -0.189 | -- | -0.367 | 8.84 | -- | -- | -- | -- |
| 62.2 | 0.369 | 9.58 | -0.52 | 0.979 | -- | -- | -- | -0.367 | 8.86 | -- | -- | -- | -- |
| 105.38 | 0.478 | 9.61 | -0.801 | -- | 0.351 | -- | -- | -0.395 | -- | 33.64 | 7193 | -- | -- |
| 63.5 | 0.371 | 9.55 | -- | 0.995 | 0.414 | -- | -- | -0.227 | 9.04 | 30.49 | 3427 | -- | -- |
| 116.87 | 0.505 | 9.6 | -0.52 | -- | -- | -- | -- | -0.36 | -- | -- | -- | -- | -- |
| 69.32 | 0.389 | 9.56 | -- | 0.978 | -- | -- | -- | -0.309 | 8.9 | -- | -- | -- | -- |
| 114.67 | 0.499 | 9.6 | -- | -- | 0.365 | -- | -- | -0.335 | -- | 34 | 7193 | -- | -- |
| 124 | 0.52 | 9.59 | -- | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.73 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 3 | 45.93 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 4 | 45.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 6 | 45.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 32 | 46.54 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 34 | 46.55 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 36 | 46.56 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 38 | 46.56 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 40 | 46.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 45 | 46.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 49 | 46.62 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 51 | 46.65 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 69 | 46.78 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 70 | 46.80 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 74 | 46.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 92 | 46.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 99 | 46.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 101 | 46.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 174 | 47.12 | wind | 5.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 184 | 47.15 | wind | 5.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 255 | 47.35 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 263 | 47.37 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 296 | 47.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 301 | 47.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 318 | 47.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 330 | 47.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 383 | 47.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 448 | 47.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 508 | 48.01 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 541 | 48.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 548 | 48.10 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 564 | 48.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 566 | 48.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 579 | 48.16 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 591 | 48.19 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 22 |
| 597 | 48.20 | wind | 5.0 | 43200 | > th | dose dependent | no | NA | NA |
| 599 | 48.21 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 601 | 48.21 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 610 | 48.23 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 611 | 48.24 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 623 | 48.26 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 630 | 48.27 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 631 | 48.27 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 639 | 48.29 | wind | 5.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 648 | 48.30 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 682 | 48.35 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 691 | 48.38 | wind | 5.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 695 | 48.40 | wind | 5.0 | 43200 | > th | dose independent | no | NA | NA |
| 697 | 48.40 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 714 | 48.44 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 717 | 48.44 | wind | 5.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 726 | 48.45 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 735 | 48.46 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 737 | 48.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 744 | 48.48 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 748 | 48.48 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 756 | 48.50 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 761 | 48.50 | wind | 5.0 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 800 | 48.54 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 12 |
| 802 | 48.55 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 825 | 48.57 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 830 | 48.58 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 845 | 48.59 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 851 | 48.60 | wind | 7.0 | 43200 | < th | dose independent | no | NA | NA |
| 856 | 48.60 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 860 | 48.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 881 | 48.62 | wind | 7.0 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 894 | 48.63 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 903 | 48.64 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 912 | 48.64 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 920 | 48.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 954 | 48.68 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 997 | 48.72 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 23 |