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Os11g0216300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ABC-1 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.022) R2 : 0.851
β1 : -0.842 (0.0806) R2dD : 0.037 R2D : 0.0203
β2 : 2.87 (0.0575) R2dC : 0.817 R2C : 0.795
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.386 (0.047) R2dN8 : 0.0296 R2N8 : 0.0016
σ : 0.414
deviance : 78.21
__
_____
C
peak time of C : 6.14
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.09 0.367 13.7 -0.441 2.5 -0.988 0.79 0.979 -0.164 6.24 20.47 382 -- --
61.63 0.366 13.7 -0.634 2.5 -0.94 0.611 -- -0.215 6.21 20.27 410 -- --
62.26 0.367 13.7 -0.528 2.48 -1 -- 0.416 -0.194 6.18 20.5 410 -- --
62.16 0.367 13.7 -0.599 2.48 -0.954 -- -- -0.214 6.21 21.52 412 -- --
244.02 0.728 13.6 0.762 -- -3.41 -- 7.91 0.198 -- 24.65 406 -- --
76.65 0.41 13.8 -0.85 2.86 -- 0.799 -- -0.383 6.16 -- -- -- --
78.21 0.414 13.8 -0.842 2.87 -- -- -- -0.386 6.14 -- -- -- --
253.02 0.741 13.8 -0.272 -- -2.94 -- -- -0.0592 -- 24.49 393 -- --
70.42 0.391 13.7 -- 2.46 -1.35 -- -- -0.113 6.13 16.15 456 -- --
504 1.05 13.8 -0.762 -- -- -- -- -0.322 -- -- -- -- --
96.89 0.46 13.7 -- 2.85 -- -- -- -0.292 6.16 -- -- -- --
254.82 0.743 13.7 -- -- -2.98 -- -- -0.0148 -- 24.4 400 -- --
519.3 1.06 13.8 -- -- -- -- -- -0.238 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.03 temperature 25.0 270 > th dose independent rect. 13 5
2 47.29 temperature 25.0 270 > th dose independent rect. 12 7
4 47.64 temperature 10.0 270 > th dose dependent rect. 12 7
7 48.13 temperature 25.0 270 > th dose independent rect. 14 3
10 48.42 temperature 10.0 270 > th dose dependent rect. 3 15
37 50.13 radiation 1.0 270 < th dose dependent sin 16 NA
44 50.22 radiation 1.0 270 < th dose independent sin 15 NA
45 50.23 radiation 1.0 270 > th dose independent rect. 13 17
47 50.27 temperature 10.0 270 > th dose dependent rect. 12 20
62 50.81 temperature 10.0 270 > th dose dependent rect. 13 18
65 50.86 radiation 1.0 270 > th dose independent rect. 13 6
82 51.10 humidity 90.0 270 < th dose independent rect. 14 3
95 51.36 temperature 15.0 10 > th dose dependent rect. 14 7
96 51.37 radiation 1.0 270 > th dose independent sin 15 NA
104 51.50 humidity 90.0 270 < th dose independent rect. 13 5
107 51.57 radiation 1.0 270 > th dose independent rect. 14 3
114 51.72 temperature 30.0 270 < th dose dependent rect. 8 15
130 52.01 humidity 70.0 270 > th dose independent rect. 23 9
139 52.18 wind 1.0 270 > th dose independent rect. 13 5
144 52.22 atmosphere 995.0 270 > th dose independent rect. 13 5
148 52.26 temperature 10.0 270 > th dose independent rect. 13 5
150 52.26 atmosphere 1010.0 270 < th dose independent rect. 13 5
152 52.26 temperature 10.0 270 > th dose independent rect. 18 19
154 52.31 wind 9.0 270 < th dose independent rect. 18 19
157 52.39 precipitation 0.1 270 < th dose independent rect. 18 19
158 52.39 precipitation 0.1 270 < th dose dependent rect. 18 19
160 52.41 radiation 40.0 270 < th dose independent rect. 23 9
164 52.47 temperature 10.0 270 > th dose independent rect. 23 9
165 52.47 temperature 30.0 270 < th dose independent rect. 23 9
166 52.47 humidity 50.0 270 > th dose independent rect. 23 9
168 52.47 atmosphere 995.0 270 > th dose independent rect. 23 9
170 52.47 temperature 10.0 270 > th dose independent rect. 8 15
171 52.47 atmosphere 995.0 270 > th dose independent rect. 18 19
172 52.48 wind 9.0 270 < th dose independent rect. 23 9
173 52.48 temperature 30.0 270 < th dose independent rect. 18 19
174 52.48 temperature 15.0 270 > th dose dependent rect. 15 1
177 52.49 atmosphere 1010.0 270 < th dose independent rect. 12 7
179 52.50 wind 9.0 270 < th dose independent rect. 8 15
180 52.51 wind 9.0 270 < th dose independent rect. 13 5
185 52.57 precipitation 0.1 270 < th dose independent rect. 13 5
187 52.57 precipitation 0.1 270 < th dose dependent rect. 13 5
225 52.75 temperature 10.0 270 > th dose independent rect. 12 7
228 52.75 temperature 10.0 270 > th dose independent rect. 19 17
229 52.75 atmosphere 995.0 270 > th dose independent rect. 19 17
232 52.76 wind 9.0 270 < th dose independent rect. 19 17
234 52.77 wind 1.0 270 > th dose independent rect. 12 7
239 52.83 atmosphere 995.0 270 > th dose independent rect. 12 7
261 52.95 precipitation 0.1 270 < th dose independent rect. 23 9
262 52.95 precipitation 0.1 270 < th dose dependent rect. 23 9
266 53.00 temperature 10.0 270 > th dose independent rect. 14 3
268 53.00 atmosphere 1010.0 270 < th dose independent rect. 14 3
270 53.00 temperature 10.0 270 > th dose independent rect. 17 21
272 53.02 wind 1.0 270 > th dose independent rect. 14 3
278 53.03 temperature 10.0 270 > th dose independent rect. 7 6
279 53.03 atmosphere 995.0 270 > th dose independent rect. 7 6
280 53.03 atmosphere 1015.0 270 < th dose independent rect. 7 6
281 53.03 wind 9.0 270 < th dose independent rect. 12 7
282 53.03 temperature 10.0 270 > th dose independent rect. 13 18
283 53.03 wind 9.0 270 < th dose independent rect. 17 21
291 53.06 atmosphere 995.0 270 > th dose independent rect. 14 3
293 53.08 precipitation 0.1 270 < th dose independent rect. 7 6
294 53.08 precipitation 0.1 270 < th dose independent rect. 17 21
295 53.08 precipitation 0.1 270 < th dose dependent rect. 7 6
296 53.08 precipitation 0.1 270 < th dose dependent rect. 17 21
298 53.09 precipitation 0.1 270 < th dose independent rect. 19 17
299 53.09 precipitation 0.1 270 < th dose dependent rect. 19 17
300 53.10 wind 9.0 270 < th dose independent rect. 7 6
301 53.10 atmosphere 995.0 270 > th dose independent rect. 13 18
305 53.14 atmosphere 1015.0 270 < th dose independent rect. 23 9
307 53.15 precipitation 0.1 270 < th dose independent rect. 14 3
308 53.15 precipitation 0.1 270 < th dose dependent rect. 14 3
314 53.18 precipitation 0.1 270 < th dose independent rect. 12 7
316 53.18 precipitation 0.1 270 < th dose dependent rect. 12 7
328 53.23 wind 9.0 270 < th dose independent rect. 14 3
338 53.30 precipitation 0.1 270 < th dose independent rect. 8 14
340 53.30 precipitation 0.1 270 < th dose dependent rect. 8 14
341 53.31 wind 9.0 270 < th dose independent rect. 13 18
355 53.39 humidity 50.0 270 > th dose dependent rect. 22 10
358 53.45 radiation 1.0 270 > th dose independent rect. 7 6
372 53.49 radiation 1.0 270 < th dose dependent rect. 16 10
385 53.59 radiation 1.0 270 < th dose independent rect. 15 11
391 53.65 precipitation 0.1 270 < th dose independent rect. 13 18
393 53.65 precipitation 0.1 270 < th dose dependent rect. 13 18
424 53.94 radiation 40.0 270 < th dose independent rect. 14 3
444 54.09 atmosphere 995.0 270 > th dose dependent rect. 7 6
459 54.22 wind 1.0 270 > th dose independent rect. 7 6
475 54.31 temperature 30.0 270 < th dose independent rect. 7 6
476 54.31 wind 1.0 270 > th dose independent rect. 18 19
520 54.60 humidity 50.0 270 > th dose independent rect. 18 19
525 54.65 humidity 50.0 270 > th dose independent rect. 19 17
544 54.68 temperature 10.0 10 > th dose dependent rect. 2 18
545 54.69 radiation 40.0 90 < th dose independent rect. 14 5
561 54.78 radiation 40.0 270 < th dose dependent rect. 23 9
574 54.81 precipitation 0.1 10 < th dose independent rect. 14 6
575 54.81 precipitation 0.1 10 < th dose dependent rect. 14 6
586 54.85 atmosphere 1015.0 270 < th dose dependent rect. 13 4
587 54.86 humidity 60.0 270 > th dose independent rect. 17 9
625 55.00 wind 1.0 10 > th dose independent rect. 14 6
644 55.07 wind 1.0 270 > th dose dependent rect. 13 5
649 55.09 temperature 10.0 10 > th dose independent rect. 14 6
651 55.09 atmosphere 1010.0 10 < th dose independent rect. 14 6
654 55.09 temperature 10.0 10 > th dose independent rect. 20 18
655 55.09 atmosphere 995.0 10 > th dose independent rect. 20 18
672 55.15 wind 9.0 10 < th dose independent rect. 20 18
676 55.16 radiation 1.0 270 < th dose dependent rect. 8 17
677 55.17 radiation 1.0 270 < th dose independent rect. 8 17
688 55.20 atmosphere 995.0 10 > th dose independent rect. 14 6
712 55.26 wind 1.0 270 > th dose dependent rect. 14 3
722 55.29 temperature 30.0 270 < th dose independent rect. 17 8
732 55.31 radiation 40.0 10 < th dose independent rect. 14 6
749 55.36 humidity 50.0 270 > th dose independent rect. 7 6
753 55.37 wind 9.0 10 < th dose independent rect. 14 6
765 55.41 temperature 10.0 10 > th dose dependent rect. 14 20
804 55.49 atmosphere 1015.0 270 < th dose independent rect. 8 14
860 55.63 temperature 30.0 270 < th dose independent rect. 8 15
894 55.70 temperature 10.0 270 > th dose dependent sin 21 NA
970 55.90 atmosphere 1015.0 270 < th dose independent rect. 19 17
973 55.91 atmosphere 1015.0 270 < th dose independent rect. 13 18