Os06g0701300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-lactamase family protein.
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Os06g0701300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-lactamase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.1 | 0.326 | 9.91 | 0.503 | 1.2 | 1.64 | 0.105 | -0.687 | 0.431 | 18.3 | 0.4946 | 729 | -- | -- |
| 47.44 | 0.321 | 9.92 | 0.507 | 1.19 | 1.73 | 0.649 | -- | 0.432 | 18.8 | 0.4947 | 785 | -- | -- |
| 47.84 | 0.322 | 9.9 | 0.539 | 1.19 | 1.68 | -- | -0.757 | 0.451 | 18.4 | 0.45 | 748 | -- | -- |
| 48.07 | 0.323 | 9.92 | 0.5 | 1.29 | 1.89 | -- | -- | 0.433 | 18.9 | 0.4323 | 804 | -- | -- |
| 55.41 | 0.349 | 9.9 | 0.355 | -- | 0.135 | -- | -0.0396 | 0.358 | -- | 10.01 | 1713 | -- | -- |
| 54.45 | 0.346 | 9.9 | 0.337 | 0.214 | -- | -0.0782 | -- | 0.357 | 2.14 | -- | -- | -- | -- |
| 54.47 | 0.346 | 9.9 | 0.339 | 0.214 | -- | -- | -- | 0.358 | 2 | -- | -- | -- | -- |
| 55.42 | 0.348 | 9.9 | 0.357 | -- | 0.134 | -- | -- | 0.358 | -- | 10 | 1726 | -- | -- |
| 54.7 | 0.344 | 9.91 | -- | 1.25 | 1.84 | -- | -- | 0.405 | 19 | 0.5 | 806 | -- | -- |
| 57.22 | 0.353 | 9.9 | 0.348 | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
| 57.5 | 0.355 | 9.91 | -- | 0.22 | -- | -- | -- | 0.32 | 2.04 | -- | -- | -- | -- |
| 58.12 | 0.355 | 9.91 | -- | -- | -0.207 | -- | -- | 0.324 | -- | 52.37 | 4181 | -- | -- |
| 60.41 | 0.363 | 9.91 | -- | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.29 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 2 | 43.34 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 8 | 44.23 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 14 | 44.38 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 17 | 44.45 | wind | 3 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 24 | 44.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 57 | 44.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 65 | 44.96 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 130 | 45.43 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 258 | 45.91 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 266 | 45.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 272 | 45.97 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 275 | 45.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 279 | 45.99 | wind | 5 | 14400 | > th | dose independent | sin | 18 | NA |
| 298 | 46.02 | wind | 9 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 302 | 46.03 | wind | 5 | 14400 | < th | dose independent | sin | 18 | NA |
| 311 | 46.05 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 7 |
| 333 | 46.11 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 336 | 46.11 | wind | 9 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 386 | 46.20 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 398 | 46.22 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 401 | 46.22 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 414 | 46.26 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 434 | 46.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 444 | 46.31 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 452 | 46.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 468 | 46.34 | wind | 9 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 596 | 46.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 597 | 46.51 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 633 | 46.56 | radiation | 10 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 673 | 46.61 | radiation | 10 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 804 | 46.69 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 827 | 46.71 | humidity | 90 | 43200 | > th | dose dependent | sin | 11 | NA |
| 843 | 46.72 | wind | 5 | 14400 | > th | dose dependent | sin | 18 | NA |
| 877 | 46.74 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 964 | 46.80 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 15 |