BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0168800 Os07g0168800|AK121813
(161 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0168800 Zinc finger, A20-type domain containing protein 335 7e-93
Os03g0792900 Similar to PVPR3 protein 224 2e-59
Os06g0612800 Similar to PVPR3 protein 145 1e-35
Os02g0195600 Zinc finger, A20-type domain containing protein 140 4e-34
Os08g0436400 134 3e-32
Os03g0793000 Zinc finger, A20-type domain containing protein 134 3e-32
Os01g0765900 119 1e-27
Os01g0718000 Zinc finger, A20-type domain containing protein 117 5e-27
Os09g0486500 Multiple stress-responsive zinc-finger protein... 115 1e-26
Os02g0530300 Zinc finger, A20-type domain containing protein 112 9e-26
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 110 4e-25
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 103 5e-23
Os07g0169500 96 1e-20
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 95 3e-20
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 335 bits (860), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKK 60
MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKK
Sbjct: 1 MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKK 60
Query: 61 AFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGG 120
AFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGG
Sbjct: 61 AFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGG 120
Query: 121 TFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
TFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI
Sbjct: 121 TFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 224 bits (571), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 126/163 (77%), Gaps = 5/163 (3%)
Query: 1 MAQESWKNESEET-VHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEK 59
MAQESWK E+EET VHTPEAPILCVNNCGFFGS MT NMCSKCYRD VK T+A VVEK
Sbjct: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVAT-VVEK 59
Query: 60 KAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQE-PPKPPSNRCLSCRKKVGLTGFQCRC 118
K AS S TPL D + + KQ +E PKPPSNRCLSCRKKVGLTGF+CRC
Sbjct: 60 KPL--ASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRC 117
Query: 119 GGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
GGTFCS HRY ++H CTFDYK+ GR+QIAKQNP+V A+KI KI
Sbjct: 118 GGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 100/169 (59%), Gaps = 20/169 (11%)
Query: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASS 67
E PE PILC+NNCGFFGS+ T NMCSKC+++ + + +AA ++ S
Sbjct: 5 ETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDS-IVNGGDS 63
Query: 68 SKTPLEPAKPDEVPAAAVEDKQAAQEPPK--PPS-------------NRCLSCRKKVGLT 112
K P+ A EV A VE K +P + PS NRC +CRK+VGLT
Sbjct: 64 GKEPI-IAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLT 122
Query: 113 GFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
GF CRCG +C+ HRY++ HDC FDY+ A RD IAK NPVV AEK++KI
Sbjct: 123 GFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 95/169 (56%), Gaps = 18/169 (10%)
Query: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASS 67
E PE PILC+NNCGFFGS+ T NMCSKC+++ + + +AA ++
Sbjct: 5 EAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGG 64
Query: 68 SKTPLEPAKPDEVPAAAVEDKQAAQEPP---------------KPPSNRCLSCRKKVGLT 112
+ + + V A VE K +P K NRC +CRK+VGLT
Sbjct: 65 KEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLT 124
Query: 113 GFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
GF CRCG +C+ HRY++ H+C FDY+ A RD IAK NPVV AEK++KI
Sbjct: 125 GFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
>Os08g0436400
Length = 224
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 91/147 (61%), Gaps = 9/147 (6%)
Query: 22 LCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVP 81
LC + CGFFGS TNNMCSKCYRD +K T+ A + P+ PA P
Sbjct: 80 LCSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTDITVPIAPATTAPTP 139
Query: 82 A-------AAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDC 134
+ A +A KP NRC++CRKKVGL GF+CRCGGTFCSTHR+ + H C
Sbjct: 140 SLKGKEEEATAAASSSAAAAAKP--NRCVACRKKVGLLGFECRCGGTFCSTHRHADKHAC 197
Query: 135 TFDYKKAGRDQIAKQNPVVIAEKINKI 161
TFD+KK+ R++IAK+NP+++A KI K
Sbjct: 198 TFDFKKSDREKIAKENPLIVAPKITKF 224
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 9 ESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYR------DFVKVTTMAAPVVEKKAF 62
+ E + +CV CGFFGS TNNMCS+CYR D V+ A +E
Sbjct: 10 DDETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLELVGV 69
Query: 63 TPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTF 122
++ K + P V +++ + NRC +CRKKVGLTGF+CRCGG F
Sbjct: 70 AETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNF 129
Query: 123 CSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKI 158
C HR+ +AH C FDYK AG++QIAKQNP+V+A+K+
Sbjct: 130 CGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKL 165
>Os01g0765900
Length = 165
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 10 SEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRD--FVKVTTMAAPVVEKKAFTPASS 67
S E + P+LC + CGF+G+ T +MCS CYR + TMA A A++
Sbjct: 2 SSEQQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAAT 61
Query: 68 SKTPLEPAKPDEVPAAAVEDKQ-AAQEPPKP--------PSNRCLSCRKKVGLTGFQCRC 118
T + VP+A V +++ P+P P+NRC SC+KKVGL GF CRC
Sbjct: 62 VATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRC 121
Query: 119 GGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKI-NKI 161
G T+C THRY E H C FD+K A RD IA+ NP++ EK+ NKI
Sbjct: 122 GATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 165
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 18/148 (12%)
Query: 20 PILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDE 79
P+ C N CGFFGS+ T +CSKCYR T M+ A A + L PA P+
Sbjct: 13 PLPCANGCGFFGSADTRGLCSKCYRQ----TVMSQASAPSAAAQSAEHDQVVL-PA-PEG 66
Query: 80 VPAAAVEDKQAAQEPPKPPSN------RCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHD 133
VP D+ A PP PP + RC +C + VGL GF+CRCG FC HRY++ HD
Sbjct: 67 VPV----DEGAM--PPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHD 120
Query: 134 CTFDYKKAGRDQIAKQNPVVIAEKINKI 161
C +DY+ AGRD IA+ NPVV +K+ K+
Sbjct: 121 CGYDYRGAGRDAIARANPVVRPDKVEKL 148
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 1 MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCY----RDFVKVTTMAAPV 56
MAQ K++ + PE LC N+CGF G+ T N+C C+ +++++PV
Sbjct: 1 MAQRDKKDQEPTELRAPEI-TLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPV 59
Query: 57 VEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPS-----NRCLSCRKKVGL 111
++K+ PA+ P P +P E A P P + NRC CRK+VGL
Sbjct: 60 LDKQPPRPAAPLVEPQAP-----LPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGL 114
Query: 112 TGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
TGF+CRCG FC HRY++ H C++DYK A RD IA+ NPVV A KI +
Sbjct: 115 TGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 22 LCVNNCGFFGSSMTNNMCSKCYRDFV-KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEV 80
LC NNCGFFGS T ++CSKCYRD + +T V + PA+ +P + P +
Sbjct: 14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFL 73
Query: 81 PAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKK 140
P++ + S RC SCRK+VGLTGF CRCGGTFC HRY E H C FD+K
Sbjct: 74 PSSTAAEAGVVVAAVAKAS-RCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKA 132
Query: 141 AGRDQIAKQNPVVIAEKI 158
AGRD IA+ NP++ +K+
Sbjct: 133 AGRDAIARANPLIKGDKL 150
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 21/176 (11%)
Query: 1 MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAA------ 54
MAQ K E + PE LC N+CGF G+ TNN+C C+ ++ ++
Sbjct: 1 MAQREKKVEEPTELRAPEM-TLCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASPS 59
Query: 55 -------PVVEK--KAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSC 105
PVVEK +A ++++ L +P P + + NRC SC
Sbjct: 60 TTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSS-----VNRCHSC 114
Query: 106 RKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
R++VGLTGF+CRCG +C HRY++ HDC+FDYK A RD IA++NPVV A KI +
Sbjct: 115 RRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVRF 170
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 53/63 (84%)
Query: 96 KPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIA 155
+P +NRC +CR+KVGLTGF+CRCGGTFC HRY + H C FDYK +GR+ IAKQNPVV+A
Sbjct: 171 QPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVA 230
Query: 156 EKI 158
+K+
Sbjct: 231 DKL 233
>Os07g0169500
Length = 152
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 75/144 (52%), Gaps = 26/144 (18%)
Query: 29 FFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSS-KTPLEPAKPDEVPAAAVED 87
FFGS+ T+ +CSKCY+ P T A S KT L+ ++ ++D
Sbjct: 24 FFGSAATDGLCSKCYKQ-------QQPQPRHLIGTAAGDSDKTSLKVVA--DLSTLVIKD 74
Query: 88 KQAA-------QEPPKPPS---NRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFD 137
PP + NRC +CRKKVGL GF CRCGG FC AH C FD
Sbjct: 75 NSGVGGEGTTVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCG------AHACAFD 128
Query: 138 YKKAGRDQIAKQNPVVIAEKINKI 161
YK AGR+ IA+ NP+V+A KINKI
Sbjct: 129 YKAAGREAIARHNPLVVAPKINKI 152
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 93 EPPKPP--SNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQN 150
EP P NRC CRK+VGLTGF+CRCG FC HR++E H+C+FDYK AGR++IA+ N
Sbjct: 104 EPLSPVLFVNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARAN 163
Query: 151 PVVIAEKINKI 161
PV+ A KI KI
Sbjct: 164 PVIRAAKIIKI 174
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.128 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,667,938
Number of extensions: 300440
Number of successful extensions: 2133
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2119
Number of HSP's successfully gapped: 14
Length of query: 161
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 68
Effective length of database: 12,179,899
Effective search space: 828233132
Effective search space used: 828233132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)