BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0108400 Os07g0108400|AK059356
(163 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0108400 C2 calcium/lipid-binding region, CaLB domain c... 300 2e-82
Os07g0108500 C2 calcium/lipid-binding region, CaLB domain c... 196 9e-51
Os02g0327000 C2 domain containing protein 178 1e-45
Os07g0501700 C2 calcium/lipid-binding region, CaLB domain c... 178 2e-45
Os07g0500300 C2 calcium/lipid-binding region, CaLB domain c... 146 8e-36
Os05g0382000 Similar to ABL164Cp 127 3e-30
Os02g0722500 Arf GTPase activating protein family protein 123 7e-29
Os02g0198300 Arf GTPase activating protein family protein 114 4e-26
Os09g0251800 C2 calcium/lipid-binding region, CaLB domain c... 111 3e-25
Os01g0951100 Arf GTPase activating protein family protein 109 9e-25
Os07g0462500 85 2e-17
>Os07g0108400 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 163
Score = 300 bits (769), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/163 (92%), Positives = 150/163 (92%)
Query: 1 MDGLVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSI 60
MDGLVGLLKIRVVRGINLAYRDTRGSDPYVVLRLG NPIWHEELTLSI
Sbjct: 1 MDGLVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGKQKVKTSVKKKSVNPIWHEELTLSI 60
Query: 61 MNPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNC 120
MNPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNC
Sbjct: 61 MNPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNC 120
Query: 121 LADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPGRH 163
LADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPGRH
Sbjct: 121 LADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPGRH 163
>Os07g0108500 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 161
Score = 196 bits (497), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 118/161 (73%)
Query: 1 MDGLVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSI 60
M L G L +RV+RG+NL RD GSDPYVVL L NP+W+EELTL++
Sbjct: 1 MSDLPGFLSVRVLRGVNLVSRDAGGSDPYVVLHLDNQKLKTGVVKKTTNPVWNEELTLAV 60
Query: 61 MNPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNC 120
NP PI+L VFDKDTFS+DD MGDAE D+E M+++ MD ++IR+G++++T+RP Q C
Sbjct: 61 RNPETPIQLEVFDKDTFSKDDQMGDAEFDIEALMQIVRMDLQDIRSGTVVRTVRPGRQCC 120
Query: 121 LADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPG 161
LADESH+ W NG+ VQD++L+LRNVE+G + +QL+WV IPG
Sbjct: 121 LADESHIVWENGQIVQDMLLKLRNVETGVVHLQLKWVNIPG 161
>Os02g0327000 C2 domain containing protein
Length = 165
Score = 178 bits (452), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
Query: 4 LVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIMNP 63
LVGL+K+RVVRG+NLA RD R SDPYV++R+G NP W++ELTLSI +P
Sbjct: 5 LVGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLSIEDP 64
Query: 64 IAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNCLAD 123
P++L V+DKDTF DD MG+AE+D+ P +EV+ M E + + +++K + P+ QNCLA+
Sbjct: 65 AVPVRLEVYDKDTFI-DDAMGNAELDIRPLVEVVKMKIEGVADNTVVKKVVPNRQNCLAE 123
Query: 124 ESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPG 161
ES ++ GK QD++LRLR+VE GE+++QLQWV IPG
Sbjct: 124 ESTIYISEGKVKQDVVLRLRDVECGEIELQLQWVDIPG 161
>Os07g0501700 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 166
Score = 178 bits (451), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 114/163 (69%), Gaps = 2/163 (1%)
Query: 1 MDGLVGLLKIRVVRGINLAYRD--TRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTL 58
M+ L+GLLK+RV+RG+NLA D T SDPYVVLR G NP W+EELTL
Sbjct: 1 MECLLGLLKVRVMRGLNLAICDPLTHSSDPYVVLRHGSQKVKSSIRYHSINPEWNEELTL 60
Query: 59 SIMNPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQ 118
SI N + P+K+ VFDKDTF++DD MGDAE + F+E+ D ++ +G+++KTI P +
Sbjct: 61 SITNMMLPVKIEVFDKDTFTKDDSMGDAEFGILDFVEIAKQDHSHLGDGAVMKTIHPDKE 120
Query: 119 NCLADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPG 161
NC A ESH+ W++GK QDI+L+LRN ++GE+ + LQWV IPG
Sbjct: 121 NCFAAESHITWKDGKVSQDIVLKLRNTDTGEIILHLQWVNIPG 163
>Os07g0500300 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 173
Score = 146 bits (368), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
Query: 4 LVGLLKIRVVRGINLAYRD--TRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIM 61
++G L +RVVRG NL D T SDPYVVL G NP+W+E L L++
Sbjct: 11 VIGKLNVRVVRGSNLIIADPLTHTSDPYVVLSYGPQKVKTSVQKKNSNPVWNEVLQLAVT 70
Query: 62 NPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNCL 121
NP P+KL VFD+D F+ DD MG AE ++ + +D +++ +G+ IKTI P N L
Sbjct: 71 NPTKPVKLEVFDEDKFTADDSMGVAEFNVTDIYDAAKLDLKHVSDGARIKTIYPVGVNYL 130
Query: 122 ADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIPG 161
ESH+ W+NGK VQDI L+L V+SG + +QL+WV +PG
Sbjct: 131 GAESHVSWKNGKVVQDITLKLSKVDSGLIVLQLEWVHVPG 170
>Os05g0382000 Similar to ABL164Cp
Length = 395
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 4 LVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIMNP 63
VGL+K+ + RG NLA RD SDPYV+L LG NP+W+E L LSI +P
Sbjct: 236 FVGLIKVDIRRGTNLAVRDVMSSDPYVMLNLGHQTMKTKVIKNTLNPVWNERLMLSIPHP 295
Query: 64 IAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIR-NGSI-IKTIRPSNQNCL 121
+ P+KL VFDKDTFS DD MGD E+D++P + + GS+ + + S+ L
Sbjct: 296 VPPLKLQVFDKDTFSSDDRMGDVEVDIQPLIAAAREHESSAAIAGSVEVTKLLASDDGTL 355
Query: 122 ADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWV 157
A +S + +GK QDI LRL+NVE GEL+++L+ V
Sbjct: 356 ARDSVISVVDGKVKQDIALRLQNVEHGELEIELECV 391
>Os02g0722500 Arf GTPase activating protein family protein
Length = 332
Score = 123 bits (308), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 4 LVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIMNP 63
VG L I VVRGI LA RD SDPYVVL LG NP+W+E L +SI
Sbjct: 175 FVGELNITVVRGIQLAVRDMLTSDPYVVLTLGEQKAQTTVKPSDLNPVWNEVLKISIPRN 234
Query: 64 IAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNM--DPENIRNGSIIKTIRPSNQNCL 121
P+KL V+D DTFS DD MG+AEIDL+P + + DP + + I + + N L
Sbjct: 235 YGPLKLEVYDHDTFSADDIMGEAEIDLQPMITAVMAFGDPSRVGDMQIGRWFM-TKDNAL 293
Query: 122 ADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIP 160
+S + +GK Q++ L+L+NVESGE++++L+WV IP
Sbjct: 294 VKDSTVNVVSGKVKQEVHLKLQNVESGEMELELEWVPIP 332
>Os02g0198300 Arf GTPase activating protein family protein
Length = 320
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 3/155 (1%)
Query: 4 LVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIMNP 63
+G+L ++V G NLA RD SDPYVVL LG NP+W+EEL LS+
Sbjct: 162 FIGILNVKVKGGTNLAIRDMSSSDPYVVLTLGQQKAQTSVIKANLNPVWNEELKLSVPQQ 221
Query: 64 IAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNM--DPENIRNGSIIKTIRPSNQNCL 121
P+KL VFD D S+DD MG+AEIDL+P + DP + + I + ++ S N L
Sbjct: 222 YGPLKLQVFDHDMLSKDDLMGEAEIDLQPMINAAAAFGDPGLLGDRQIGRWLK-SGDNAL 280
Query: 122 ADESHLFWRNGKFVQDIILRLRNVESGELQVQLQW 156
+S + G+ Q++ L+L+ ESGE+++++QW
Sbjct: 281 VRDSAVVVAGGEVRQELALKLQFTESGEVELEMQW 315
>Os09g0251800 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 171
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 6 GLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIMNPIA 65
G+LK+ V G NLA RD SDPYVV+RL NP+W+EE++ SI P
Sbjct: 13 GVLKVVVASGTNLAVRDFTSSDPYVVVRLAAMNKKTKVINSCLNPVWNEEMSFSIEEPAG 72
Query: 66 PIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNG--SIIKTIRPSNQNCLAD 123
IK VFD D F DD MG A ++L+P + + ++ + S NCL
Sbjct: 73 VIKFEVFDWDRFKYDDKMGHAFLELQPVAAAAKLRRALRLTTGETKLRKVAASVDNCLMC 132
Query: 124 ESHLFWRNGKFVQDIILRLRNVESGELQVQLQWV 157
+S + + +G+ V D LRLR+VESGEL V ++W+
Sbjct: 133 DSFVTYADGEIVLDARLRLRDVESGELFVTVKWI 166
>Os01g0951100 Arf GTPase activating protein family protein
Length = 381
Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Query: 4 LVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSIMNP 63
VGL+K+ V+RG NLA RD SDPYV+L LG NP+W+E + LSI +P
Sbjct: 223 FVGLIKVNVIRGTNLAVRDMMSSDPYVILNLGHQSMKTKVIKSSLNPVWNERILLSIPDP 282
Query: 64 IAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNM-DPENIRNGSIIKTIRPSNQNCLA 122
I +KL V+DKDTF+ DD MG+AEI+++P + + + + + + +
Sbjct: 283 IPMLKLQVYDKDTFTTDDRMGEAEINIQPLVAAAKAYETSVVADTAQLNRWLAKEGIWIQ 342
Query: 123 DESHLFWRNGKFVQDIILRLRNVESGELQVQLQWV 157
+S + +GK Q++ +RL+NVE G L+++L+ V
Sbjct: 343 KDSAISIIDGKVKQEVTVRLQNVERGHLEMELECV 377
>Os07g0462500
Length = 185
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 14 RGINLAYRDTRGSDPYVVLRLGXXXXXXXXXXXXXNPIWHEELTLSI--MNPIAPIKLGV 71
RG NLA RD SDPYVVL+LG NP+W+E+LTL + +N + + L V
Sbjct: 21 RGTNLAVRDVFSSDPYVVLKLGNQEVRTRTVRKNTNPVWNEDLTLIVQDLNHLL-VTLEV 79
Query: 72 FDKDTFSRDDPMGDAEIDLEPFMEVLNMDPENIRNGSIIKTIRPSNQNCLADESHLFW-- 129
+D+D F DDPMG A +L P +E R S + + S + W
Sbjct: 80 YDRDPFV-DDPMGAAFFELRPLVEAAAASSRR-RTPSGVDSKEDGTAVVPRSGSSVVWSA 137
Query: 130 RNGKFVQDIILRLRNVESG--ELQVQLQW 156
GK Q ++LRL VESG ELQ++L+W
Sbjct: 138 SEGKAAQGLVLRLAGVESGEVELQLELEW 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.142 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,206,773
Number of extensions: 191352
Number of successful extensions: 331
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 321
Number of HSP's successfully gapped: 11
Length of query: 163
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 70
Effective length of database: 12,179,899
Effective search space: 852592930
Effective search space used: 852592930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)