Os07g0108400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os07g0108400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 314.24 | 0.833 | 5.99 | -2.35 | 3.97 | -4.03 | 2.84 | -5.07 | 0.522 | 7.32 | 78 | 702 | 5.37 | -- |
| 324.39 | 0.839 | 6.03 | -2.24 | 4 | -4.03 | -1.39 | -- | 0.545 | 6.78 | 78 | 656 | 5.71 | -- |
| 317.18 | 0.829 | 6 | -2.34 | 4.21 | -4.33 | -- | -2.32 | 0.521 | 7.09 | 77.85 | 692 | 5.58 | -- |
| 323.5 | 0.838 | 5.98 | -2.4 | 4.77 | -4.88 | -- | -- | 0.54 | 7.51 | 77.11 | 695 | 4.85 | -- |
| 363.19 | 0.888 | 6.14 | -2.26 | -- | -4.03 | -- | -3.64 | 0.42 | -- | 77 | 1466 | 5.56 | -- |
| 446.86 | 0.991 | 6.13 | -2.22 | 0.814 | -- | -0.28 | -- | 0.331 | 8.35 | -- | -- | -- | -- |
| 447.09 | 0.99 | 6.13 | -2.23 | 0.813 | -- | -- | -- | 0.331 | 8.45 | -- | -- | -- | -- |
| 368.35 | 0.894 | 6.13 | -2.33 | -- | -3.71 | -- | -- | 0.43 | -- | 77 | 1456 | 5.42 | -- |
| 469.53 | 1.01 | 5.94 | -- | 4.14 | -4.15 | -- | -- | 0.8 | 7.22 | 78 | 672 | 5.31 | -- |
| 483.95 | 1.03 | 6.15 | -2.22 | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
| 577.64 | 1.12 | 6.08 | -- | 0.805 | -- | -- | -- | 0.579 | 8.65 | -- | -- | -- | -- |
| 494.64 | 1.04 | 6.1 | -- | -- | -3.71 | -- | -- | 0.647 | -- | 80 | 1466 | 6.05 | -- |
| 614.15 | 1.16 | 6.1 | -- | -- | -- | -- | -- | 0.586 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 306.23 | wind | 7 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 2 | 307.26 | wind | 7 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 3 | 308.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 4 | 310.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 5 | 316.22 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 6 | 316.57 | humidity | 90 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 15 | 322.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 17 | 323.52 | humidity | 80 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 22 | 324.03 | wind | 7 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 26 | 324.30 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 33 | 325.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 36 | 326.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 37 | 326.31 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 41 | 326.88 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 9 |
| 42 | 327.07 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 44 | 327.36 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 46 | 327.65 | humidity | 80 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 48 | 327.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 49 | 327.86 | humidity | 80 | 720 | > th | dose independent | sin | 11 | NA |
| 53 | 327.95 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 56 | 328.09 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 60 | 328.23 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 8 | 4 |
| 62 | 328.25 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 68 | 328.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 70 | 328.58 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 83 | 329.08 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 85 | 329.09 | humidity | 80 | 720 | < th | dose independent | sin | 11 | NA |
| 103 | 329.48 | wind | 5 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 161 | 330.39 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 185 | 330.64 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 220 | 330.92 | atmosphere | 1000 | 14400 | > th | dose dependent | sin | 5 | NA |
| 223 | 330.94 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 344 | 331.82 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 484 | 332.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 530 | 332.50 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 571 | 332.61 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 6 | NA |
| 579 | 332.63 | atmosphere | 1000 | 14400 | > th | dose dependent | no | NA | NA |
| 588 | 332.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 590 | 332.68 | wind | 5 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 641 | 332.84 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 800 | 333.34 | radiation | 10 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 907 | 333.59 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 2 | 19 |
| 934 | 333.66 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 988 | 333.75 | wind | 5 | 1440 | < th | dose independent | rect. | 7 | 12 |