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Os02g0327000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : C2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0207) R2 : 0.523
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.07 (0.053) R2dC : 0.431 R2C : 0.392
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.427 (0.0434) R2dN8 : 0.131 R2N8 : 0.0919
σ : 0.389
deviance : 69.16
__
_____
C
peak time of C : 19.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.19 0.352 13 0.749 1.07 -2.54 1 9.64 0.447 19.9 0.1187 1473 -- --
60.6 0.365 13.2 0.466 1.07 0.554 1.02 -- 0.476 19.8 0.1187 1473 -- --
59.05 0.358 13 0.72 1.08 -2.52 -- 9.64 0.45 19.8 0.1238 1474 -- --
62.07 0.367 13.2 0.408 1.05 0.76 -- -- 0.484 19.7 -0.7469 296 -- --
121.53 0.513 13 0.652 -- -2.13 -- 8.51 0.438 -- -0.05351 1485 -- --
60.92 0.366 13.2 0.473 1.07 -- 1.02 -- 0.475 19.9 -- -- -- --
63.88 0.374 13.2 0.448 1.08 -- -- -- 0.477 19.7 -- -- -- --
121.04 0.512 13.1 0.351 -- 1.25 -- -- 0.479 -- -0.6688 297 -- --
66.11 0.379 13.2 -- 1.04 1 -- -- 0.447 19.7 -0.5735 280 -- --
126.29 0.525 13.1 0.434 -- -- -- -- 0.461 -- -- -- -- --
69.16 0.389 13.2 -- 1.07 -- -- -- 0.427 19.8 -- -- -- --
124.17 0.519 13.1 -- -- 1.42 -- -- 0.444 -- -0.3079 297 -- --
131.25 0.535 13.1 -- -- -- -- -- 0.413 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.78 temperature 30.0 4320 < th dose independent rect. 19 14
2 55.02 atmosphere 1000.0 10 > th dose independent rect. 12 21
4 55.08 temperature 15.0 720 > th dose independent rect. 15 16
8 55.27 atmosphere 1000.0 270 > th dose independent rect. 13 22
9 55.32 temperature 15.0 270 > th dose independent rect. 23 15
10 55.35 atmosphere 1000.0 10 > th dose independent rect. 12 23
11 55.36 atmosphere 1000.0 270 > th dose independent rect. 11 21
13 55.42 temperature 10.0 30 > th dose dependent rect. 1 15
17 55.50 atmosphere 1000.0 720 > th dose independent rect. 15 9
18 55.50 temperature 30.0 4320 < th dose independent rect. 22 11
22 55.52 atmosphere 1000.0 720 > th dose independent rect. 12 15
27 55.56 atmosphere 1000.0 720 > th dose independent sin 16 NA
29 55.57 atmosphere 1000.0 10 > th dose independent sin 11 NA
53 55.63 atmosphere 1000.0 270 > th dose independent rect. 17 14
56 55.64 atmosphere 1000.0 270 > th dose independent sin 13 NA
67 55.65 humidity 80.0 43200 < th dose independent rect. 10 20
70 55.65 precipitation 0.1 1440 > th dose dependent rect. 5 9
71 55.65 temperature 10.0 270 > th dose dependent rect. 23 15
72 55.66 atmosphere 1000.0 270 > th dose independent rect. 21 10
91 55.69 temperature 20.0 270 < th dose dependent rect. 22 12
96 55.70 temperature 15.0 720 > th dose independent rect. 18 17
102 55.71 precipitation 0.1 1440 > th dose dependent rect. 7 7
104 55.72 atmosphere 1000.0 30 > th dose independent rect. 12 16
111 55.73 temperature 20.0 270 < th dose dependent sin 8 NA
115 55.75 precipitation 0.1 1440 < th dose independent rect. 7 7
116 55.75 humidity 90.0 720 < th dose independent rect. 9 8
120 55.75 precipitation 0.1 1440 < th dose dependent rect. 7 7
121 55.76 temperature 15.0 720 > th dose independent rect. 19 8
139 55.81 precipitation 0.1 1440 > th dose independent rect. 7 7
150 55.82 temperature 15.0 720 > th dose independent rect. 23 22
153 55.83 temperature 15.0 720 > th dose independent rect. 3 16
154 55.83 humidity 80.0 43200 > th dose independent rect. 10 19
157 55.84 precipitation 0.1 1440 > th dose independent rect. 5 9
161 55.85 atmosphere 1000.0 270 > th dose independent rect. 19 12
171 55.86 temperature 15.0 720 > th dose independent rect. 1 20
183 55.88 humidity 90.0 90 < th dose independent rect. 9 16
188 55.89 atmosphere 1000.0 720 > th dose independent rect. 19 5
202 55.90 temperature 30.0 270 < th dose dependent sin 7 NA
208 55.91 humidity 80.0 43200 < th dose independent rect. 12 15
212 55.91 radiation 1.0 14400 < th dose dependent rect. 19 7
224 55.94 temperature 10.0 270 > th dose dependent sin 5 NA
225 55.95 temperature 15.0 720 > th dose independent sin 12 NA
226 55.95 precipitation 0.1 720 < th dose independent sin 22 NA
227 55.95 atmosphere 1000.0 1440 < th dose independent rect. 16 2
240 55.95 precipitation 0.1 720 < th dose dependent sin 22 NA
248 55.97 humidity 90.0 10 < th dose independent rect. 9 17
251 55.97 temperature 30.0 270 < th dose dependent rect. 21 14
255 55.98 atmosphere 1000.0 10 > th dose independent rect. 17 16
261 55.99 atmosphere 1000.0 1440 > th dose independent rect. 16 2
262 55.99 humidity 90.0 720 < th dose independent rect. 8 10
268 56.00 temperature 15.0 1440 > th dose independent rect. 10 3
271 56.00 temperature 15.0 720 > th dose independent rect. 3 18
276 56.01 atmosphere 1000.0 30 > th dose independent rect. 1 15
277 56.01 atmosphere 1000.0 30 > th dose independent rect. 1 17
282 56.02 temperature 15.0 90 > th dose independent sin 20 NA
283 56.02 temperature 15.0 270 > th dose independent sin 22 NA
284 56.02 temperature 15.0 90 > th dose independent sin 6 NA
287 56.02 radiation 20.0 270 > th dose independent rect. 10 3
290 56.02 precipitation 0.1 1440 > th dose dependent rect. 1 21
297 56.03 humidity 90.0 10 < th dose independent rect. 9 15
303 56.03 precipitation 0.1 1440 > th dose dependent rect. 4 17
304 56.04 temperature 15.0 720 > th dose independent sin 1 NA
307 56.04 humidity 80.0 43200 > th dose independent rect. 12 15
313 56.05 temperature 15.0 270 > th dose independent sin 8 NA
335 56.07 precipitation 0.1 1440 < th dose independent rect. 9 5
342 56.07 humidity 60.0 30 > th dose independent rect. 18 18
344 56.07 precipitation 0.1 1440 < th dose dependent rect. 9 5
346 56.08 humidity 80.0 43200 < th dose independent sin 17 NA
347 56.08 humidity 90.0 720 < th dose independent sin 0 NA
374 56.09 radiation 1.0 1440 < th dose dependent rect. 8 9
396 56.11 precipitation 0.1 1440 < th dose independent rect. 1 21
400 56.11 precipitation 0.1 1440 < th dose dependent rect. 1 21
403 56.12 temperature 15.0 1440 > th dose independent rect. 10 5
406 56.12 humidity 80.0 43200 < th dose independent rect. 13 12
412 56.12 precipitation 0.1 1440 < th dose independent rect. 4 17
416 56.12 precipitation 0.1 1440 < th dose dependent rect. 4 17
440 56.14 atmosphere 1000.0 270 > th dose independent rect. 21 23
457 56.15 precipitation 0.1 1440 > th dose dependent rect. 21 23
463 56.16 temperature 15.0 90 > th dose independent rect. 7 23
471 56.17 temperature 15.0 720 > th dose independent rect. 9 8
484 56.18 temperature 30.0 4320 < th dose independent rect. 5 4
500 56.18 precipitation 0.1 1440 > th dose dependent rect. 15 23
503 56.19 humidity 90.0 720 < th dose independent rect. 6 12
527 56.20 temperature 15.0 1440 > th dose independent rect. 9 15
534 56.20 precipitation 0.1 1440 > th dose dependent sin 0 NA
537 56.20 temperature 30.0 30 < th dose dependent rect. 18 18
545 56.21 temperature 30.0 4320 < th dose independent rect. 8 1
588 56.23 precipitation 0.1 1440 > th dose dependent rect. 9 23
603 56.24 precipitation 0.1 1440 > th dose dependent no NA NA
608 56.24 precipitation 0.1 1440 > th dose dependent rect. 4 23
609 56.24 precipitation 0.1 1440 > th dose dependent rect. 12 23
610 56.25 humidity 80.0 43200 > th dose independent sin 17 NA
640 56.26 precipitation 0.1 1440 > th dose independent rect. 1 21
663 56.27 precipitation 0.1 1440 > th dose independent rect. 4 17
671 56.27 precipitation 0.1 1440 > th dose dependent rect. 19 23
688 56.28 precipitation 0.1 1440 > th dose dependent rect. 22 16
699 56.29 atmosphere 1000.0 30 > th dose independent rect. 19 23
704 56.29 wind 9.0 14400 > th dose dependent rect. 18 20
706 56.30 precipitation 0.1 1440 < th dose independent sin 0 NA
718 56.30 precipitation 0.1 1440 < th dose dependent sin 0 NA
719 56.30 radiation 20.0 1440 < th dose dependent rect. 10 1
726 56.30 radiation 10.0 720 < th dose dependent rect. 21 22
744 56.31 wind 3.0 720 < th dose dependent rect. 5 1
758 56.32 humidity 90.0 10 < th dose independent rect. 11 7
765 56.32 atmosphere 1000.0 270 > th dose independent rect. 23 16
783 56.32 precipitation 0.1 1440 > th dose dependent rect. 6 23
808 56.34 atmosphere 1000.0 14400 > th dose independent rect. 21 1
809 56.34 atmosphere 1000.0 14400 < th dose independent rect. 21 1
814 56.34 humidity 80.0 43200 > th dose independent rect. 13 12
825 56.34 humidity 60.0 270 > th dose independent rect. 14 22
831 56.35 humidity 90.0 10 < th dose independent sin 20 NA
841 56.35 precipitation 0.1 720 > th dose independent rect. 21 21
857 56.36 atmosphere 1015.0 1440 < th dose independent rect. 2 8
863 56.36 atmosphere 1000.0 10 < th dose independent rect. 18 21
879 56.37 temperature 15.0 1440 > th dose independent sin 21 NA
883 56.37 temperature 15.0 270 > th dose independent rect. 9 16
904 56.38 temperature 30.0 10 < th dose independent rect. 18 18
915 56.39 wind 3.0 14400 < th dose independent rect. 2 1
931 56.39 precipitation 0.1 1440 < th dose independent rect. 21 22
943 56.39 precipitation 0.1 1440 < th dose dependent rect. 21 22
984 56.41 precipitation 0.1 1440 > th dose independent rect. 21 23