BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0612800 Os06g0612800|AK069720
(171 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0612800 Similar to PVPR3 protein 355 7e-99
Os02g0195600 Zinc finger, A20-type domain containing protein 304 2e-83
Os07g0168800 Zinc finger, A20-type domain containing protein 145 2e-35
Os03g0792900 Similar to PVPR3 protein 142 2e-34
Os03g0793000 Zinc finger, A20-type domain containing protein 119 9e-28
Os01g0718000 Zinc finger, A20-type domain containing protein 117 5e-27
Os09g0486500 Multiple stress-responsive zinc-finger protein... 115 2e-26
Os01g0765900 112 2e-25
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 111 2e-25
Os02g0530300 Zinc finger, A20-type domain containing protein 104 3e-23
Os08g0436400 99 2e-21
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 97 5e-21
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 91 5e-19
Os07g0169500 89 2e-18
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 355 bits (912), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60
MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG
Sbjct: 1 MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60
Query: 61 GDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVG 120
GDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVG
Sbjct: 61 GDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVG 120
Query: 121 LTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
LTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 121 LTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 304 bits (779), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/173 (84%), Positives = 156/173 (90%), Gaps = 2/173 (1%)
Query: 1 MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60
MEHKE GCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMK+EQAKLAASSIDSIVNG
Sbjct: 1 MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG 60
Query: 61 GDSGKEPIIA--GHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKR 118
D GKE I+A G VAVAQVE KTLV QP ++AG SE V V PK +EGPNRC+TCRKR
Sbjct: 61 CDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKR 120
Query: 119 VGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
VGLTGFNCRCGN+YCA+HRYSDKH+CQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 121 VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 100/169 (59%), Gaps = 20/169 (11%)
Query: 5 ETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDS-IVNGGDS 63
E PE PILC+NNCGFFGS+ T NMCSKC+++ + + +AA ++ S
Sbjct: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASS 67
Query: 64 GKEPI-IAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLT 122
K P+ A EV A VE K +P + PS NRC +CRK+VGLT
Sbjct: 68 SKTPLEPAKPDEVPAAAVEDKQAAQEPPK--PPS-------------NRCLSCRKKVGLT 112
Query: 123 GFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
GF CRCG +C+ HRY++ HDC FDY+ A RD IAK NPVV AEK++KI
Sbjct: 113 GFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 102/172 (59%), Gaps = 22/172 (12%)
Query: 2 EHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGG 61
E +ETG PE PILC+NNCGFFGS T NMCSKC+++ + +AK A+ ++
Sbjct: 9 EAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATVVE------ 58
Query: 62 DSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGP--NRCSTCRKRV 119
K+P+ + + V +V ++G V + P NRC +CRK+V
Sbjct: 59 ---KKPLASLSSTPLVTEV-------TDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKV 108
Query: 120 GLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
GLTGF CRCG +C+MHRY+D H C FDY+ R+ IAK NP+VKA+K+ KI
Sbjct: 109 GLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 119 bits (299), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 5 ETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSG 64
ET C G +C+ CGFFGS AT NMCS+C++E + + AA++ +
Sbjct: 12 ETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLE------ 65
Query: 65 KEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGF 124
+ G AE + + +V + + K PNRC+ CRK+VGLTGF
Sbjct: 66 ----LVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGF 121
Query: 125 NCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 168
CRCG +C HR++D H C FDY++A ++ IAK NP+V A+KL
Sbjct: 122 KCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKL 165
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 28/161 (17%)
Query: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHA 73
P+ C N CGFFGSA T +CSKC+++ +M Q A AA+ H
Sbjct: 13 PLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQSAE---------------HD 57
Query: 74 EVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGP---NRCSTCRKRVGLTGFNCRCGN 130
+V + E + EG P R G +RC+ C + VGL GF CRCG
Sbjct: 58 QVVLPAPEGVPV----------DEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGA 107
Query: 131 LYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
++C HRYSD+HDC +DYR A RDAIA+ANPVV+ +K++K+
Sbjct: 108 VFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 14/157 (8%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEV 75
LC N+CGF G+ AT N+C C +S + + P++ A +
Sbjct: 21 LCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPV--LDKQPPRPAAPLVEPQAPL 78
Query: 76 AVAQVEVKT-LVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCA 134
E+ + L PA +A S NRCS CRKRVGLTGF CRCG+L+C
Sbjct: 79 PPPVEEMASALATAPAPVAKTSAV-----------NRCSRCRKRVGLTGFRCRCGHLFCG 127
Query: 135 MHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
HRYSD+H C +DY++AARDAIA+ NPVV+A K+ +
Sbjct: 128 EHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
>Os01g0765900
Length = 165
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 25/165 (15%)
Query: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHA 73
P+LC + CGF+G+ AT++MCS C+++ + +NG P + A
Sbjct: 12 PVLCASGCGFYGNPATLDMCSVCYRQHCL---------------LNGATMATGPSSSVAA 56
Query: 74 EVAV----AQVEVKTLVAQPAEIAGPSEGVTVNPKG-----REGP-NRCSTCRKRVGLTG 123
A V + AE+ G + NP+ ++ P NRC++C+K+VGL G
Sbjct: 57 ASAATVATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLG 116
Query: 124 FNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 168
F CRCG YC HRY +KH C FD++ A+RDAIA+ANP++K EKL
Sbjct: 117 FACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 161
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEV 75
LC N+CGF G+ AT N+C C + AAS + + ++P A +
Sbjct: 21 LCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASPSTTSLPVFPVVEKPRQAVQSSA 80
Query: 76 AVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAM 135
A A V V +P AGP E + NRC +CR+RVGLTGF CRCG LYC
Sbjct: 81 AAAVALV---VERPT--AGPVESSSKA-SRSSSVNRCHSCRRRVGLTGFRCRCGELYCGA 134
Query: 136 HRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
HRYSD+HDC FDY++AARDAIA+ NPVV+A K+ +
Sbjct: 135 HRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVRF 170
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 19/158 (12%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEV 75
LC NNCGFFGS AT+++CSKC+++ ++ A + ++ S
Sbjct: 14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAAS-----------------AC 56
Query: 76 AVAQVEVKTLVAQPAEI-AGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCA 134
+ + PA + + + V +RC++CRKRVGLTGF CRCG +C
Sbjct: 57 PATHPSSPSSSSCPAFLPSSTAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFCG 116
Query: 135 MHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL-DKI 171
HRY ++H C FD++ A RDAIA+ANP++K +KL DKI
Sbjct: 117 AHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
>Os08g0436400
Length = 224
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEV 75
LC + CGFFGS T NMCSKC+++ +K ++SS + + D V
Sbjct: 80 LCSSGCGFFGSKETNNMCSKCYRDH-LKATSPLFSSSSSPATASTTD----------ITV 128
Query: 76 AVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAM 135
+A + + + + + PNRC CRK+VGL GF CRCG +C+
Sbjct: 129 PIAPATTAPTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCST 188
Query: 136 HRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
HR++DKH C FD++ + R+ IAK NP++ A K+ K
Sbjct: 189 HRHADKHACTFDFKKSDREKIAKENPLIVAPKITKF 224
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 51/62 (82%)
Query: 110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLD 169
NRC+ CRKRVGLTGF CRCG L+C HR+S+ H+C FDY+TA R+ IA+ANPV++A K+
Sbjct: 113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKII 172
Query: 170 KI 171
KI
Sbjct: 173 KI 174
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 48/59 (81%)
Query: 110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 168
NRC+TCR++VGLTGF CRCG +C HRY+D+H C FDY+++ R+ IAK NPVV A+KL
Sbjct: 175 NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233
>Os07g0169500
Length = 152
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 30/154 (19%)
Query: 23 FFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEVAVAQV-- 80
FFGSAAT +CSKC+K+ +Q Q + I + D ++A + + +
Sbjct: 24 FFGSAATDGLCSKCYKQ---QQPQPR---HLIGTAAGDSDKTSLKVVADLSTLVIKDNSG 77
Query: 81 ---EVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHR 137
E T++A PA + + NRC CRK+VGL GF CRCG ++C H
Sbjct: 78 VGGEGTTVMAPPATVT-------------KAKNRCKACRKKVGLLGFPCRCGGMFCGAHA 124
Query: 138 YSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
C FDY+ A R+AIA+ NP+V A K++KI
Sbjct: 125 ------CAFDYKAAGREAIARHNPLVVAPKINKI 152
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,076,707
Number of extensions: 234947
Number of successful extensions: 700
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 689
Number of HSP's successfully gapped: 14
Length of query: 171
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 77
Effective length of database: 12,127,685
Effective search space: 933831745
Effective search space used: 933831745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)