BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0158900 Os06g0158900|J065151E06
(89 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0158900 Similar to Multidrug-resistance associated pro... 184 8e-48
Os11g0155600 Similar to Multidrug-resistance associated pro... 169 3e-43
Os12g0562700 Similar to Multidrug-resistance associated pro... 146 4e-36
Os04g0588600 ABC transporter, transmembrane region, type 1 ... 125 8e-30
Os06g0561800 Similar to Multidrug resistance associated pro... 124 2e-29
Os04g0588700 ABC transporter, transmembrane region domain c... 124 2e-29
Os03g0142800 Similar to MRP-like ABC transporter 124 2e-29
Os05g0196100 Similar to Multidrug-resistance associated pro... 121 1e-28
Os01g0173900 Similar to MRP-like ABC transporter 116 3e-27
Os04g0209200 Similar to Glutathione-conjugate transporter A... 114 1e-26
Os04g0209300 Similar to Glutathione-conjugate transporter A... 110 2e-25
Os02g0288733 ABC transporter, transmembrane region domain c... 107 2e-24
Os02g0288400 Similar to Multidrug resistance associated pro... 104 1e-23
AK119821 79 1e-15
AK110211 67 2e-12
Os04g0481700 Similar to Multidrug resistance p-glycoprotein 64 3e-11
Os03g0181700 63 4e-11
Os07g0464600 ABC transporter, transmembrane region domain c... 62 7e-11
>Os06g0158900 Similar to Multidrug-resistance associated protein 3
Length = 89
Score = 184 bits (468), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI
Sbjct: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
Query: 61 TVAHRIPTVMDCTMVLAMSDGTSFLPPTY 89
TVAHRIPTVMDCTMVLAMSDGTSFLPPTY
Sbjct: 61 TVAHRIPTVMDCTMVLAMSDGTSFLPPTY 89
>Os11g0155600 Similar to Multidrug-resistance associated protein 3
Length = 675
Score = 169 bits (429), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/81 (100%), Positives = 81/81 (100%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI
Sbjct: 560 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 619
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
TVAHRIPTVMDCTMVLAMSDG
Sbjct: 620 TVAHRIPTVMDCTMVLAMSDG 640
>Os12g0562700 Similar to Multidrug-resistance associated protein 3
Length = 1198
Score = 146 bits (368), Expect = 4e-36, Method: Composition-based stats.
Identities = 65/81 (80%), Positives = 74/81 (91%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
VVE GSNWSMGQRQL CLGRALLRR RIL+LDEATAS+DNATDA++QKT+RTE KD T+I
Sbjct: 1079 VVEGGSNWSMGQRQLLCLGRALLRRSRILILDEATASMDNATDAVIQKTVRTELKDSTII 1138
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHRIPTVMDCT VL ++DG
Sbjct: 1139 TIAHRIPTVMDCTRVLVVNDG 1159
>Os04g0588600 ABC transporter, transmembrane region, type 1 domain containing
protein
Length = 1187
Score = 125 bits (313), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 71/81 (87%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
VVE+G NWS+GQRQLFCLGR LL+R +L+LDEATAS+D++TDAI+Q+TIR EF+DCTV+
Sbjct: 1074 VVENGENWSVGQRQLFCLGRVLLKRSNVLILDEATASVDSSTDAIIQETIRDEFRDCTVL 1133
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHRI TV+D ++L S+G
Sbjct: 1134 TIAHRIHTVIDSDLILVFSEG 1154
>Os06g0561800 Similar to Multidrug resistance associated protein 1
Length = 1214
Score = 124 bits (311), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/81 (69%), Positives = 68/81 (83%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V +DGSNWS+GQRQLFCLGR LLRR +ILVLDEATASID+ATDAI+Q+ IR +F CTV+
Sbjct: 1099 VSDDGSNWSVGQRQLFCLGRVLLRRNKILVLDEATASIDSATDAIIQRVIRQQFSSCTVV 1158
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHR+PTV D V+ +S G
Sbjct: 1159 TIAHRVPTVTDSDKVMVLSYG 1179
>Os04g0588700 ABC transporter, transmembrane region domain containing protein
Length = 1333
Score = 124 bits (311), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 70/82 (85%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V+E+G NWSMGQRQLFCLGR LLR+ +ILVLDEATAS+D+ATD I+Q+ IR EFKDCTV+
Sbjct: 1208 VIENGDNWSMGQRQLFCLGRILLRKSKILVLDEATASVDSATDRIIQEIIRQEFKDCTVL 1267
Query: 61 TVAHRIPTVMDCTMVLAMSDGT 82
+AHR+ TV+D ++L + +G+
Sbjct: 1268 AIAHRMNTVIDSDLILVLGEGS 1289
>Os03g0142800 Similar to MRP-like ABC transporter
Length = 1505
Score = 124 bits (311), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 70/81 (86%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V+E+G NWS+GQRQL LGRALL++ +ILVLDEATAS+D ATD ++QK IR+EFKDCTV
Sbjct: 1392 VLENGDNWSVGQRQLIALGRALLKQAKILVLDEATASVDTATDNLIQKIIRSEFKDCTVC 1451
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHRIPTV+D +VL +SDG
Sbjct: 1452 TIAHRIPTVIDSDLVLVLSDG 1472
>Os05g0196100 Similar to Multidrug-resistance associated protein 3
Length = 148
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 66/81 (81%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V +DG NWS GQRQLFCL R LLRR +ILVLDEATASID+ATDA+LQ+ I+ EF CTVI
Sbjct: 37 VSDDGENWSAGQRQLFCLARVLLRRNKILVLDEATASIDSATDAVLQRVIKQEFSGCTVI 96
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHR+PTV D MV+ +S G
Sbjct: 97 TIAHRVPTVTDSDMVMVLSYG 117
>Os01g0173900 Similar to MRP-like ABC transporter
Length = 1505
Score = 116 bits (291), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V+E+G NWS+GQRQL CLGR +L+R +ILVLDEATAS+D ATD ++QKT+R +F D TVI
Sbjct: 1392 VIENGENWSVGQRQLVCLGRVILKRSKILVLDEATASVDTATDNLIQKTLRQQFSDATVI 1451
Query: 61 TVAHRIPTVMDCTMVLAMSDGTS 83
T+AHRI +V+D MVL + +G +
Sbjct: 1452 TIAHRITSVLDSDMVLLLDNGVA 1474
>Os04g0209200 Similar to Glutathione-conjugate transporter AtMRP4
Length = 1207
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 62/81 (76%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V + G NWS+GQRQL CLGR +L+R RIL +DEATAS+D+ TDA +QK R EF CT+I
Sbjct: 1095 VADSGENWSVGQRQLLCLGRVILKRTRILFMDEATASVDSQTDATIQKITRQEFSSCTII 1154
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
++AHRIPTVMDC VL + G
Sbjct: 1155 SIAHRIPTVMDCDRVLVLDAG 1175
>Os04g0209300 Similar to Glutathione-conjugate transporter AtMRP4
Length = 1512
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 62/81 (76%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V + G NWS+GQ+QL C GR +L+R RIL +DEATAS+D+ TDA +Q+ IR EF DCT+I
Sbjct: 1396 VADMGENWSVGQKQLLCFGRVILKRSRILFMDEATASVDSQTDATIQRIIREEFTDCTII 1455
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
++AHRIPTVMD VL + G
Sbjct: 1456 SIAHRIPTVMDSDRVLVLDAG 1476
>Os02g0288733 ABC transporter, transmembrane region domain containing protein
Length = 1095
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 65/81 (80%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V E+GSNWS GQRQL CLGR +L++ +ILVLDEAT+S+D TD ++QKT++ +F +CTVI
Sbjct: 983 VTENGSNWSAGQRQLVCLGRVVLKKRKILVLDEATSSVDPITDNLIQKTLKQQFSECTVI 1042
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHRI +V+D V+ M +G
Sbjct: 1043 TIAHRITSVLDSEKVILMDNG 1063
>Os02g0288400 Similar to Multidrug resistance associated protein 2
Length = 1186
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 65/81 (80%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V E+G+NWS GQRQL CLGR +L++ +ILVLDEAT+S+D TD ++QKT++ +F +CTVI
Sbjct: 1074 VTENGNNWSAGQRQLVCLGRVVLKKRKILVLDEATSSVDPITDNLIQKTLKQQFFECTVI 1133
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
T+AHRI +V+D V+ + +G
Sbjct: 1134 TIAHRIASVLDSEKVILLDNG 1154
>AK119821
Length = 839
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 7 NWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVITVAHRI 66
N S GQRQL CL RA+L+ ++L++DEATASID +TDA +Q TIR E + T IT+AHR+
Sbjct: 719 NLSQGQRQLLCLARAMLKNPKVLIMDEATASIDYSTDAKIQGTIR-ELQ-STTITIAHRL 776
Query: 67 PTVMDCTMVLAMSDG 81
T++D VL + G
Sbjct: 777 ATIVDYDKVLVLDHG 791
>AK110211
Length = 1530
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 9 SMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVITVAHRIPT 68
S GQ+QL L RALLR+ +ILVLDEAT+++D TDA +Q + T+F DCTVI VAHRI T
Sbjct: 1430 SSGQKQLLSLARALLRKRKILVLDEATSAMDVETDAAVQNVLETQFADCTVIAVAHRIAT 1489
Query: 69 VMDCTMVLAMSDG 81
++ ++ MS G
Sbjct: 1490 IIGFDQIICMSAG 1502
>Os04g0481700 Similar to Multidrug resistance p-glycoprotein
Length = 675
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V E G+ S GQRQ L RA+L+ RIL+LDEAT+++D A++ ++Q + + T +
Sbjct: 558 VGERGAQLSGGQRQRIALARAVLKDARILLLDEATSALDAASERLVQDAVDRMLRGRTCV 617
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
VAHR+ TV + + DG
Sbjct: 618 VVAHRLSTVEKSDTIAVVKDG 638
>Os03g0181700
Length = 1482
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V E G S GQ+Q + RA++++ RIL+LDEA++++D ++ +Q+ +R + T I
Sbjct: 1368 VGESGVQLSGGQKQRIAIARAIVKQARILLLDEASSALDLESERHVQEALRRASRRATAI 1427
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
TVAHR+ TV D + +S G
Sbjct: 1428 TVAHRLSTVRDADRIAVVSAG 1448
>Os07g0464600 ABC transporter, transmembrane region domain containing protein
Length = 690
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 1 VVEDGSNWSMGQRQLFCLGRALLRRCRILVLDEATASIDNATDAILQKTIRTEFKDCTVI 60
V E GS S GQRQ + RALL+ IL+LDEAT+++D ++ ++Q+ + K T +
Sbjct: 580 VGERGSLLSGGQRQRIAIARALLKNSPILILDEATSALDTTSERLVQEALNHLMKGRTSL 639
Query: 61 TVAHRIPTVMDCTMVLAMSDG 81
+AHR+ TV + + SDG
Sbjct: 640 VIAHRLSTVQNAHQIAVCSDG 660
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,982,473
Number of extensions: 82141
Number of successful extensions: 402
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 403
Number of HSP's successfully gapped: 18
Length of query: 89
Length of database: 17,035,801
Length adjustment: 59
Effective length of query: 30
Effective length of database: 13,955,175
Effective search space: 418655250
Effective search space used: 418655250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 149 (62.0 bits)