Os02g0288400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Multidrug resistance associated protein 2.
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Os02g0288400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Multidrug resistance associated protein 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 339.11 | 0.865 | 4.24 | 1.93 | 1.13 | -1.67 | 0.0564 | -0.365 | 0.621 | 7.74 | 79.36 | 1457 | 10.8 | 1.57 |
| 338.65 | 0.857 | 4.24 | 1.95 | 1.15 | -1.69 | 0.0959 | -- | 0.613 | 7.86 | 79.26 | 1464 | 10.7 | 1.56 |
| 338.58 | 0.857 | 4.23 | 1.94 | 1.14 | -1.69 | -- | -0.254 | 0.626 | 7.82 | 79.31 | 1462 | 10.7 | 1.57 |
| 338.62 | 0.857 | 4.24 | 1.96 | 1.15 | -1.7 | -- | -- | 0.612 | 7.88 | 79.26 | 1465 | 10.7 | 1.57 |
| 329.29 | 0.845 | 4.21 | 2.2 | -- | -2.01 | -- | 0.195 | 0.707 | -- | 82 | 2503 | 10.6 | 1.63 |
| 413.92 | 0.954 | 4.29 | 1.72 | 1.06 | -- | 0.0646 | -- | 0.395 | 7.4 | -- | -- | -- | -- |
| 413.93 | 0.953 | 4.29 | 1.72 | 1.06 | -- | -- | -- | 0.395 | 7.39 | -- | -- | -- | -- |
| 328.4 | 0.844 | 4.22 | 2.16 | -- | -2.07 | -- | -- | 0.674 | -- | 81.73 | 2498 | 10.6 | 1.7 |
| 438.99 | 0.976 | 4.22 | -- | 1.17 | -1.53 | -- | -- | 0.593 | 7.79 | 78.74 | 1471 | 10.5 | 1.78 |
| 474.27 | 1.02 | 4.31 | 1.74 | -- | -- | -- | -- | 0.412 | -- | -- | -- | -- | -- |
| 491.96 | 1.04 | 4.33 | -- | 1.08 | -- | -- | -- | 0.203 | 7.28 | -- | -- | -- | -- |
| 428.71 | 0.964 | 4.31 | -- | -- | -2.03 | -- | -- | 0.395 | -- | 81.01 | 2365 | 9.65 | 4.96 |
| 553.95 | 1.1 | 4.36 | -- | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 345.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 2 | 345.86 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 4 | 346.31 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 10 | 346.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 19 | 347.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 20 | 347.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 21 | 347.22 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 30 | 347.48 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 41 | 348.01 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 50 | 348.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 56 | 348.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 65 | 348.71 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 81 | 349.05 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 84 | 349.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 86 | 349.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 102 | 349.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 103 | 349.43 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 122 | 349.79 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 127 | 350.04 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 144 | 350.47 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 22 |
| 155 | 350.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 16 |
| 163 | 350.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 4 | 22 |
| 171 | 351.23 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 180 | 351.41 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 182 | 351.57 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 184 | 351.62 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 192 | 351.78 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 213 | 352.10 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 221 | 352.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 222 | 352.22 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 235 | 352.47 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 252 | 352.90 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 256 | 352.93 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 263 | 353.05 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 285 | 353.41 | radiation | 1.0 | 270 | < th | dose independent | sin | 0 | NA |
| 289 | 353.48 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 316 | 353.79 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 323 | 353.90 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 336 | 354.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 344 | 354.18 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 345 | 354.21 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 358 | 354.44 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 360 | 354.48 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 386 | 354.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 449 | 355.58 | humidity | 90.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 488 | 356.02 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 547 | 356.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 19 |
| 566 | 356.59 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 23 |
| 583 | 356.75 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 652 | 357.18 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 740 | 357.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 742 | 357.70 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 8 |
| 745 | 357.71 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 17 |
| 746 | 357.72 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 759 | 357.79 | radiation | 1.0 | 720 | < th | dose independent | rect. | 19 | 23 |
| 776 | 357.90 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 785 | 357.90 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 794 | 357.95 | humidity | 80.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 808 | 357.99 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 857 | 358.26 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 858 | 358.26 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 18 |
| 869 | 358.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 870 | 358.31 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 879 | 358.35 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 888 | 358.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 899 | 358.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 911 | 358.46 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 918 | 358.50 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 993 | 358.79 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 13 |