Os11g0155600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Multidrug-resistance associated protein 3.
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Os11g0155600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Multidrug-resistance associated protein 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.25 | 0.662 | 8.05 | 4.03 | 2.67 | -2.62 | -0.953 | 8.31 | 0.299 | 5.05 | 25.21 | 5122 | -- | -- |
| 206.21 | 0.669 | 8.29 | 4.89 | 2.77 | -3.59 | -1.1 | -- | 0.569 | 5.35 | 19 | 29636 | -- | -- |
| 200.54 | 0.66 | 8.05 | 4.04 | 2.67 | -2.62 | -- | 8.32 | 0.302 | 5.07 | 25.2 | 5113 | -- | -- |
| 191.85 | 0.645 | 8.15 | 4.68 | 2.75 | -3.91 | -- | -- | 0.67 | 5.39 | 19 | 30604 | -- | -- |
| 481.05 | 1.03 | 8.31 | 1.61 | -- | -1.71 | -- | 1.85 | 0.134 | -- | 25.5 | 4982 | -- | -- |
| 385.89 | 0.921 | 8.47 | 0.711 | 2.7 | -- | -0.935 | -- | -0.767 | 5.38 | -- | -- | -- | -- |
| 388.05 | 0.922 | 8.47 | 0.71 | 2.69 | -- | -- | -- | -0.763 | 5.39 | -- | -- | -- | -- |
| 349.17 | 0.87 | 8.41 | 1.57 | -- | -2.46 | -- | -- | -0.041 | -- | 25.9 | 372 | -- | -- |
| 314.04 | 0.83 | 8.4 | -- | 2.65 | -1.12 | -- | -- | -0.489 | 5.88 | 22.9 | 1585 | -- | -- |
| 766.22 | 1.29 | 8.5 | 0.801 | -- | -- | -- | -- | -0.697 | -- | -- | -- | -- | -- |
| 401.33 | 0.937 | 8.49 | -- | 2.71 | -- | -- | -- | -0.842 | 5.38 | -- | -- | -- | -- |
| 400.59 | 0.932 | 8.37 | -- | -- | -2.39 | -- | -- | -0.114 | -- | 25.85 | 380 | -- | -- |
| 783.13 | 1.31 | 8.52 | -- | -- | -- | -- | -- | -0.785 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 184.84 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 2 | 184.93 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 3 | 185.28 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 4 | 185.29 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 10 | 185.32 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 10 |
| 36 | 187.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 46 | 187.49 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 48 | 187.50 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 54 | 187.52 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 58 | 187.66 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 73 | 187.84 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 109 | 188.53 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 113 | 188.68 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 114 | 188.68 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 121 | 188.83 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 123 | 188.85 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 129 | 188.88 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 151 | 189.01 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 152 | 189.03 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 159 | 189.16 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 22 |
| 168 | 189.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 169 | 189.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 16 |
| 176 | 189.26 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 193 | 189.39 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 199 | 189.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 222 | 189.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 21 |
| 232 | 189.45 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 285 | 189.62 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 294 | 189.68 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 358 | 189.99 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 389 | 190.05 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 405 | 190.14 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 420 | 190.20 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 422 | 190.22 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 429 | 190.24 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 435 | 190.26 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 436 | 190.26 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 481 | 190.47 | temperature | 20.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 487 | 190.48 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 501 | 190.53 | temperature | 20.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 530 | 190.61 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 545 | 190.65 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 551 | 190.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 553 | 190.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 599 | 190.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 605 | 190.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 621 | 190.86 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 703 | 191.09 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 739 | 191.17 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 746 | 191.18 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 754 | 191.20 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 869 | 191.65 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 870 | 191.65 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 16 |
| 889 | 191.66 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 20 |
| 945 | 191.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 951 | 191.93 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 969 | 191.97 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 987 | 192.06 | wind | 7.0 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 992 | 192.07 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 996 | 192.08 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 8 |