Os06g0158900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Multidrug-resistance associated protein 3.
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Os06g0158900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Multidrug-resistance associated protein 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.53 | 0.612 | 8.57 | -2.3 | 3.57 | -1.09 | 1.72 | -0.493 | -0.434 | 8.33 | 73.21 | 1428 | -- | -- |
| 169.36 | 0.606 | 8.58 | -2.39 | 3.6 | -1.14 | 1.81 | -- | -0.464 | 8.45 | 73 | 1342 | -- | -- |
| 178.29 | 0.622 | 8.57 | -2.23 | 3.58 | -1.12 | -- | -0.646 | -0.429 | 8.21 | 73.47 | 1476 | -- | -- |
| 179.22 | 0.624 | 8.58 | -2.33 | 3.58 | -1.14 | -- | -- | -0.455 | 8.21 | 73 | 1472 | -- | -- |
| 884.28 | 1.38 | 8.67 | -2.27 | -- | -1.22 | -- | -0.392 | -0.417 | -- | 73.08 | 1437 | -- | -- |
| 215.23 | 0.688 | 8.55 | -2.17 | 3.59 | -- | 1.67 | -- | -0.303 | 8.3 | -- | -- | -- | -- |
| 223.79 | 0.701 | 8.55 | -2.12 | 3.6 | -- | -- | -- | -0.305 | 8.26 | -- | -- | -- | -- |
| 884.57 | 1.39 | 8.68 | -2.32 | -- | -1.23 | -- | -- | -0.431 | -- | 73.46 | 1436 | -- | -- |
| 289.3 | 0.792 | 8.56 | -- | 3.68 | -1.78 | -- | -- | -0.314 | 8.15 | 88 | 1659 | -- | -- |
| 939.03 | 1.43 | 8.64 | -2.1 | -- | -- | -- | -- | -0.265 | -- | -- | -- | -- | -- |
| 342.74 | 0.866 | 8.49 | -- | 3.59 | -- | -- | -- | -0.0685 | 8.3 | -- | -- | -- | -- |
| 990.01 | 1.47 | 8.61 | -- | -- | -1.95 | -- | -- | -0.188 | -- | 88 | 1445 | -- | -- |
| 1055.28 | 1.52 | 8.59 | -- | -- | -- | -- | -- | -0.0321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.51 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 11 | 160.65 | humidity | 80 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 22 | 161.54 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 23 | 161.60 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 47 | 162.64 | humidity | 90 | 720 | < th | dose independent | rect. | 20 | 3 |
| 64 | 163.19 | humidity | 70 | 720 | > th | dose dependent | sin | 15 | NA |
| 154 | 165.98 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 197 | 166.78 | humidity | 90 | 720 | > th | dose independent | rect. | 17 | 7 |
| 223 | 167.28 | humidity | 90 | 720 | > th | dose independent | rect. | 13 | 11 |
| 347 | 169.40 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 370 | 169.64 | humidity | 80 | 720 | > th | dose independent | sin | 17 | NA |
| 451 | 170.26 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 457 | 170.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 495 | 170.54 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 496 | 170.54 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 529 | 170.77 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 584 | 171.05 | humidity | 90 | 720 | < th | dose independent | rect. | 10 | 14 |
| 621 | 171.19 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 633 | 171.20 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 636 | 171.21 | humidity | 90 | 1440 | < th | dose dependent | sin | 15 | NA |
| 688 | 171.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 788 | 171.71 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 801 | 171.75 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 805 | 171.76 | humidity | 60 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 818 | 171.81 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 828 | 171.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 842 | 171.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 849 | 171.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 895 | 171.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 897 | 171.99 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 900 | 171.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 933 | 172.03 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 979 | 172.17 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 16 |