Os07g0464600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter, transmembrane region domain containing protein.
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Os07g0464600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter, transmembrane region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.11 | 0.402 | 10.9 | -0.0746 | 0.956 | -1.28 | 0.21 | 0.308 | -0.219 | 3.97 | 20.51 | 1233 | -- | -- |
| 73.33 | 0.399 | 10.9 | -0.111 | 0.953 | -1.32 | 0.268 | -- | -0.219 | 3.94 | 20.6 | 1233 | -- | -- |
| 73.23 | 0.399 | 10.9 | -0.0687 | 0.957 | -1.28 | -- | 0.34 | -0.217 | 3.93 | 20.51 | 1233 | -- | -- |
| 73.48 | 0.399 | 10.9 | -0.129 | 0.958 | -1.33 | -- | -- | -0.228 | 3.92 | 20.5 | 1233 | -- | -- |
| 118.04 | 0.506 | 10.8 | 0.0759 | -- | -1.27 | -- | 0.579 | -0.176 | -- | 20.5 | 1794 | -- | -- |
| 114.74 | 0.502 | 10.9 | -0.672 | 0.88 | -- | 0.616 | -- | -0.529 | 4.34 | -- | -- | -- | -- |
| 115.72 | 0.504 | 10.9 | -0.678 | 0.882 | -- | -- | -- | -0.533 | 4.2 | -- | -- | -- | -- |
| 118.73 | 0.507 | 10.9 | -0.0516 | -- | -1.34 | -- | -- | -0.195 | -- | 20.6 | 1790 | -- | -- |
| 73.87 | 0.4 | 10.9 | -- | 0.958 | -1.38 | -- | -- | -0.208 | 3.91 | 20.5 | 1234 | -- | -- |
| 157.84 | 0.587 | 10.9 | -0.643 | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
| 127.84 | 0.529 | 10.9 | -- | 0.869 | -- | -- | -- | -0.457 | 4.22 | -- | -- | -- | -- |
| 118.79 | 0.508 | 10.9 | -- | -- | -1.37 | -- | -- | -0.186 | -- | 20.6 | 1790 | -- | -- |
| 168.73 | 0.606 | 10.9 | -- | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 69.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 4 | 70.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 7 | 70.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 40 | 71.05 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 50 | 71.17 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 52 | 71.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 59 | 71.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 73 | 71.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 83 | 71.52 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 111 | 71.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 131 | 71.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 153 | 72.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 183 | 72.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 184 | 72.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 253 | 72.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 272 | 72.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 322 | 73.05 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 330 | 73.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 444 | 73.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 616 | 74.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 680 | 74.55 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 890 | 75.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 901 | 75.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 920 | 75.42 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |