BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0399200 Os05g0399200|AK101507
         (239 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0399200  Similar to Endo-1,3                                 424   e-119
Os05g0399100  Similar to Endo-1,3                                 317   6e-87
Os08g0238200  Dienelactone hydrolase domain containing protein    230   7e-61
Os05g0400100  Dienelactone hydrolase domain containing protein    228   3e-60
Os05g0400200                                                      224   4e-59
Os11g0275500  Similar to Endo-1,3                                 223   8e-59
Os08g0238500  Similar to Endo-1,3                                 211   5e-55
Os08g0239300  Dienelactone hydrolase domain containing protein    207   6e-54
Os11g0275200  Similar to Endo-1,3                                 197   7e-51
Os11g0275000  Similar to Endo-1,3                                 196   1e-50
Os08g0238600  Similar to Endo-1,3                                 163   1e-40
Os08g0239100  Conserved hypothetical protein                      125   3e-29
Os05g0398900                                                       83   1e-16
Os08g0283600                                                       80   1e-15
>Os05g0399200 Similar to Endo-1,3
          Length = 239

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/239 (89%), Positives = 213/239 (89%)

Query: 1   MASSQCWENPPALDPAXXXXXXXXXXXXQXXXXXXXXXXXXXXVLISDAFGFEAPNLRKI 60
           MASSQCWENPPALDPA            Q              VLISDAFGFEAPNLRKI
Sbjct: 1   MASSQCWENPPALDPAGGGGEVVGDFGGQKAYVAGSAGSKAAVVLISDAFGFEAPNLRKI 60

Query: 61  ADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASF 120
           ADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASF
Sbjct: 61  ADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASF 120

Query: 121 IGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPEL 180
           IGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPEL
Sbjct: 121 IGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPEL 180

Query: 181 LKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
           LKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK
Sbjct: 181 LKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
>Os05g0399100 Similar to Endo-1,3
          Length = 284

 Score =  317 bits (811), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 159/240 (66%), Positives = 177/240 (73%), Gaps = 1/240 (0%)

Query: 1   MASSQCWENPPALDPAXXXXXXXXXXXXQXXXXXXXXXXXXXXVLISDAFGFEAPNLRKI 60
           MAS QC  NPP L+PA                           VLISD FGFEAPNLRKI
Sbjct: 45  MASPQCCANPPTLNPAGGEGKVVESFGGIKAYVAGAAESKAAVVLISDVFGFEAPNLRKI 104

Query: 61  ADKVALFGYFVVVPDFLHGDPYQPDNPNNP-GIWLQSHNPKEAFEEAKPVIAALKEKGAS 119
           ADKVA  GYFVVVPDFLHGDP  P++   P  +W++ H P +AFEEAKP+IAALKEKG S
Sbjct: 105 ADKVASSGYFVVVPDFLHGDPLVPESTEKPFQMWIKEHGPDKAFEEAKPIIAALKEKGVS 164

Query: 120 FIGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPE 179
            IGA GYCWGAKVVVEL K HEIQAAV+ HPS + VDD+KEVKCPI+ILGAEID+ SPPE
Sbjct: 165 SIGAVGYCWGAKVVVELVKAHEIQAAVMCHPSFVTVDDMKEVKCPIAILGAEIDRMSPPE 224

Query: 180 LLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
           ++KQFEQ+LS    I HFVKIFPGVEHGW VRY +DDAAAVKSAEEAL DM+DWF K LK
Sbjct: 225 VVKQFEQVLSSKSGIGHFVKIFPGVEHGWTVRYKNDDAAAVKSAEEALADMIDWFNKNLK 284
>Os08g0238200 Dienelactone hydrolase domain containing protein
          Length = 276

 Score =  230 bits (586), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 114/237 (48%), Positives = 146/237 (61%), Gaps = 2/237 (0%)

Query: 5   QCWENPPALDPAXXXXXXXXXXXXQ--XXXXXXXXXXXXXXVLISDAFGFEAPNLRKIAD 62
           QC ENPP L  A                             VL SD FGFEAP LRKIAD
Sbjct: 40  QCLENPPELTAAGDGEAGVVVQNLGGFAAYVTGAAHSGRAIVLASDVFGFEAPLLRKIAD 99

Query: 63  KVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASFIG 122
           KV   GY+VVVPDF  G PY  D   N   W+ +H+P +A E++KP+ AALK +G S +G
Sbjct: 100 KVGEAGYYVVVPDFFQGRPYNGDPSINITQWIMAHSPVKAAEDSKPIFAALKREGKSVVG 159

Query: 123 AAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPELLK 182
             GYCWG K+ VE+ K +E+ A V+ HPS +  DD+K+VKCPI ILGAE D  +PP L+ 
Sbjct: 160 VGGYCWGGKLAVEVAKTNEVGAIVISHPSSVTADDMKDVKCPIEILGAENDAVTPPRLVY 219

Query: 183 QFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
           QF   L   PE+ +F +IFPGV HG+A RYN  +  AV++AE++L  M+DWF+K+LK
Sbjct: 220 QFVNALRQRPEVDYFARIFPGVAHGFACRYNASNPFAVRTAEQSLALMLDWFEKHLK 276
>Os05g0400100 Dienelactone hydrolase domain containing protein
          Length = 290

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/198 (57%), Positives = 139/198 (70%), Gaps = 3/198 (1%)

Query: 44  VLISDAFGFEAPNLRKIADKVAL-FGYFVVVPDFLHGDPYQPDNPNNP-GIWLQSHNPKE 101
           +L+SD +GF AP LRKIADKVA   G +VVVPD L GDPY  D+P  P   W+++H+P E
Sbjct: 90  ILVSDYYGFRAPKLRKIADKVAYQLGCYVVVPDLLFGDPYT-DDPARPFEEWIKTHSPVE 148

Query: 102 AFEEAKPVIAALKEKGASFIGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEV 161
           A E+ KP+IAALK+ G S +G  GYCWG KV VEL K  E +A V+ HP+L+ VDD+KEV
Sbjct: 149 AAEKTKPLIAALKKDGTSTVGVGGYCWGGKVAVELSKTEETKAVVISHPALVVVDDMKEV 208

Query: 162 KCPISILGAEIDKTSPPELLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVK 221
           KCPI ILG E+D  SPP+L+ Q E  L  N  + H VKIFP   HG+A RYN  D  AVK
Sbjct: 209 KCPIEILGGELDTISPPQLIHQLEDALDQNKRVHHLVKIFPDAPHGFACRYNATDPFAVK 268

Query: 222 SAEEALEDMMDWFKKYLK 239
           +AEEA  DM+ WF KYL+
Sbjct: 269 TAEEARADMVKWFDKYLE 286
>Os05g0400200 
          Length = 290

 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 109/197 (55%), Positives = 137/197 (69%), Gaps = 2/197 (1%)

Query: 44  VLISDAFGFEAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPG-IWLQSHNPKEA 102
           +L+SD +GF AP LR+IADKVA  GY+VVVPD L+GDPY  D+P  P  +W+ +H+P+EA
Sbjct: 87  ILVSDYYGFRAPKLRQIADKVAYSGYYVVVPDLLYGDPYT-DDPARPFWVWIMAHSPEEA 145

Query: 103 FEEAKPVIAALKEKGASFIGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVK 162
            E+ KP+IA LK++G S +G  GYCWG KV VEL K  E QA V+ HPSL+ V D+ EVK
Sbjct: 146 AEKTKPLIAVLKKEGMSSVGVGGYCWGGKVAVELSKTEETQAVVISHPSLVTVHDMTEVK 205

Query: 163 CPISILGAEIDKTSPPELLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKS 222
            PI ILG E D  +PP ++ QFE  L  N  + HFVK FP   H +A RYN  D  AVK+
Sbjct: 206 RPIEILGGERDTITPPLVVHQFEHALDQNNRVDHFVKTFPKAPHAFACRYNASDPFAVKT 265

Query: 223 AEEALEDMMDWFKKYLK 239
           AEEA  DM+ WF +YLK
Sbjct: 266 AEEARADMVQWFDEYLK 282
>Os11g0275500 Similar to Endo-1,3
          Length = 276

 Score =  223 bits (568), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 112/238 (47%), Positives = 144/238 (60%), Gaps = 3/238 (1%)

Query: 5   QCWENPPALDPAXXXXXXXXXXXX---QXXXXXXXXXXXXXXVLISDAFGFEAPNLRKIA 61
           QC ENPP L  A                              VL SD FGFEAP LRKIA
Sbjct: 39  QCLENPPELTAAGDGEAGVVVQNLGGFAAYVTGGAAHSGRAIVLASDVFGFEAPLLRKIA 98

Query: 62  DKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASFI 121
           DKV   GY+VVVPDF    PY  D   N   W+ +H+P +A E++KP+ AALK +G   +
Sbjct: 99  DKVGEAGYYVVVPDFFQRRPYNGDPSINITKWIMAHSPVKAAEDSKPIFAALKREGKYVV 158

Query: 122 GAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPELL 181
           G  GYCWG K+ VE+ K +E+ A V+ HPS +  DD+K+VKCPI ILGAE D  +PP L+
Sbjct: 159 GVGGYCWGGKLAVEVAKTNEVGAIVISHPSSVTADDMKDVKCPIEILGAENDAVTPPRLV 218

Query: 182 KQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
            QF   L   PE+ +F +IFPGV HG+A RYN  +  AV++AE++L  M+DWF+K+LK
Sbjct: 219 YQFVNALRQRPEVDYFARIFPGVAHGFACRYNASNPFAVRTAEQSLALMLDWFEKHLK 276
>Os08g0238500 Similar to Endo-1,3
          Length = 279

 Score =  211 bits (536), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 104/204 (50%), Positives = 133/204 (65%), Gaps = 8/204 (3%)

Query: 44  VLISDAFGFEAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAF 103
           +L SD +GFEAP LR  ADKV   GY+VVVPDF HG PY  D   N   W+  H+P +A 
Sbjct: 76  ILASDIYGFEAPLLRDNADKVGEAGYYVVVPDFFHGQPYNGDPSINVTKWITLHSPVKAA 135

Query: 104 EEAKPVIAALKEKGASFIGAAGYCWG--------AKVVVELGKVHEIQAAVLLHPSLLAV 155
           E+AK + AALK +G S IG  GYCWG        AK  VE+ K +E++A V+ HPS +  
Sbjct: 136 EDAKSIFAALKREGKSVIGIGGYCWGVSAQVQLAAKFAVEVAKTNEVEAIVISHPSEVIA 195

Query: 156 DDIKEVKCPISILGAEIDKTSPPELLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHD 215
           DD+K VKCPI ILG + D  +PP L+ QF  +L    E+ +F +IFPGV HG+A RYN  
Sbjct: 196 DDMKGVKCPIEILGGQNDPITPPSLVDQFVNVLRQTTEVDYFARIFPGVSHGFACRYNAS 255

Query: 216 DAAAVKSAEEALEDMMDWFKKYLK 239
           +  AV +AE+AL  M+DWF+KYLK
Sbjct: 256 NQFAVNTAEQALALMLDWFEKYLK 279
>Os08g0239300 Dienelactone hydrolase domain containing protein
          Length = 263

 Score =  207 bits (526), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 103/197 (52%), Positives = 133/197 (67%), Gaps = 3/197 (1%)

Query: 44  VLISDAFGFEAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAF 103
           +L +D FGFEAP LRKIADKV L GY+VVVPD  HG PY  D   N   WL +H+P +A 
Sbjct: 69  LLATDIFGFEAPLLRKIADKVGLAGYYVVVPDLFHGQPYTFDQ--NRTEWLSAHSPVKAA 126

Query: 104 EEAKPVIAALKEKGASFIGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKC 163
           E+AKP+ AAL ++G S +G  GYCWG K  VE+ K +E++A V+ HP+ +  DD+KEVK 
Sbjct: 127 EDAKPIFAALSKEGKSIVGVGGYCWGGKFAVEVAKTNEVEAIVISHPAAVTADDMKEVKW 186

Query: 164 PISILGAEIDKTSPPELLKQFEQILSPNP-EIAHFVKIFPGVEHGWAVRYNHDDAAAVKS 222
           PI ILGA+ D  +PP L+ QF   L     +I +F K+F GV HG+A RYN  +   VK 
Sbjct: 187 PIEILGAQNDTVTPPRLVYQFVHALRQRTDQIDYFAKVFQGVNHGFACRYNASNPFEVKK 246

Query: 223 AEEALEDMMDWFKKYLK 239
           AE+AL  M+DWF K+LK
Sbjct: 247 AEQALALMLDWFHKHLK 263
>Os11g0275200 Similar to Endo-1,3
          Length = 266

 Score =  197 bits (500), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 129/196 (65%), Gaps = 2/196 (1%)

Query: 44  VLISDAFGFEAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAF 103
           VL SD +GF+AP LR+IADKV   GY+VVVPD  HGDP       N   WL+SH+P +  
Sbjct: 73  VLASDVYGFQAPLLRQIADKVGDAGYYVVVPDLFHGDP--ATTTVNFTEWLESHSPVKEA 130

Query: 104 EEAKPVIAALKEKGASFIGAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKC 163
           E+AK + A L+ +G S +G  GYCWG K  VE+ K +E++A V+ HP  +  DD+KEVK 
Sbjct: 131 EKAKSIFAFLRNEGKSLVGVGGYCWGGKFAVEVAKTNEVEAVVISHPYAVTADDMKEVKW 190

Query: 164 PISILGAEIDKTSPPELLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSA 223
           PI ILG + D  +PP L+ Q+   L    +I  + KIFPGV HG+A RYN  D  A+++ 
Sbjct: 191 PIEILGGQNDTVTPPRLVYQYVHALRQRNDIDFYAKIFPGVSHGFAGRYNTSDPFALETG 250

Query: 224 EEALEDMMDWFKKYLK 239
           ++AL  M+DWF+K+LK
Sbjct: 251 KQALALMLDWFQKHLK 266
>Os11g0275000 Similar to Endo-1,3
          Length = 372

 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 8/204 (3%)

Query: 44  VLISDAFGFEAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAF 103
           ++ SD +GFEAP LR  ADKV   GY+VVVPDF HG PY  D   N   W+  H+P +A 
Sbjct: 76  IVASDIYGFEAPLLRDNADKVGEAGYYVVVPDFFHGQPYNGDPSINVTKWITLHSPVKAA 135

Query: 104 EEAKPVIAALKEKGASFIGAAGYCWG--------AKVVVELGKVHEIQAAVLLHPSLLAV 155
           E+AK + AALK +G S IG  GYCWG        AK  VE+ K +E++A V+ HPS +  
Sbjct: 136 EDAKSIFAALKREGKSVIGIGGYCWGVSAQVQLTAKFAVEVAKTNEVEAIVISHPSEVIA 195

Query: 156 DDIKEVKCPISILGAEIDKTSPPELLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHD 215
           DD+K VKCPI ILG + D  +PP L+ QF  +L    E+ +FV+IFP V HG+A RYN  
Sbjct: 196 DDMKGVKCPIEILGGQNDHITPPSLVDQFVNVLRQTTEVDYFVRIFPDVSHGFACRYNAS 255

Query: 216 DAAAVKSAEEALEDMMDWFKKYLK 239
           +  AVK+A++AL  M+D     L+
Sbjct: 256 NQFAVKTAQQALALMLDCTSSPLR 279
>Os08g0238600 Similar to Endo-1,3
          Length = 173

 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 108/170 (63%), Gaps = 2/170 (1%)

Query: 70  FVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASFIGAAGYCWG 129
           +VVVPD  HGDP       N   WL+SH+P +  E+AK + A L+ +G S +G  GYCWG
Sbjct: 6   YVVVPDLFHGDP--ATTSVNFTEWLESHSPVKEAEKAKSIFAFLRNEGKSVVGVGGYCWG 63

Query: 130 AKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPELLKQFEQILS 189
            K  V + K +E++A V+ HP  +  DD+KEVK PI ILG + D  +PP L+ Q+   L 
Sbjct: 64  GKFAVTVAKTNEVEAVVISHPYAVTADDMKEVKWPIEILGGQNDTVTPPRLVYQYVHALR 123

Query: 190 PNPEIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
              +I  + KIFPGV HG+A RYN  D  AV++ ++AL  M+DWF+K+LK
Sbjct: 124 QRNDIDFYAKIFPGVSHGFAGRYNTSDPFAVETGKQALALMLDWFQKHLK 173
>Os08g0239100 Conserved hypothetical protein
          Length = 208

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 96/187 (51%), Gaps = 11/187 (5%)

Query: 4   SQCWENPPALDPAXXXXXXXXXXXXQXXXXXXXXXXXXXXVLI-SDAFGFEAPNLRKIAD 62
           SQC +NPP L                              VL+ SD FGFEAP LRKIAD
Sbjct: 23  SQCLDNPPDLTAGGGEAGVVVHDLAGFEAYVTGAVHSTKAVLLASDVFGFEAPLLRKIAD 82

Query: 63  KVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALK-EKGASFI 121
           KV   GY+V VPDF HGDPY  D   N   W   H+P +         A +K +   ++I
Sbjct: 83  KVGQAGYYVAVPDFFHGDPYTLDL--NLTEWFSKHSPMKILSSCTYQDAQIKPQIKQNYI 140

Query: 122 GAAGYCWGAKVVVELGKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPELL 181
                    K  VE+ K +E++A V  HP L+ VDDIKEVKCPI I+GA+ D  +PP+L+
Sbjct: 141 QR-------KFAVEVAKTNEVEAIVTTHPGLVTVDDIKEVKCPIEIIGAQNDTLTPPKLV 193

Query: 182 KQFEQIL 188
            Q+ Q L
Sbjct: 194 YQYVQAL 200
>Os05g0398900 
          Length = 114

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/47 (80%), Positives = 39/47 (82%)

Query: 193 EIAHFVKIFPGVEHGWAVRYNHDDAAAVKSAEEALEDMMDWFKKYLK 239
            I HFVKIFPGVEHGW VRY  DDAAAVKSAEEAL DM+DWF K LK
Sbjct: 68  RIGHFVKIFPGVEHGWTVRYKDDDAAAVKSAEEALADMIDWFNKNLK 114
>Os08g0283600 
          Length = 290

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 49/76 (64%)

Query: 53  EAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAA 112
           +A N RKIADKV   GY+VVVPDF HG PY  +   N   W+ +H+P +A E+AK + AA
Sbjct: 82  DADNYRKIADKVGEAGYYVVVPDFFHGRPYNGEPSINITQWIMAHSPVKAAEDAKLIFAA 141

Query: 113 LKEKGASFIGAAGYCW 128
           LK +  S +   GYCW
Sbjct: 142 LKRERKSIVEVGGYCW 157
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.136    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,956,336
Number of extensions: 307871
Number of successful extensions: 771
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 760
Number of HSP's successfully gapped: 14
Length of query: 239
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 141
Effective length of database: 11,918,829
Effective search space: 1680554889
Effective search space used: 1680554889
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)