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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0400100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Dienelactone hydrolase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.89 (0.0159) R2 : 0.0148
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0874 (0.0334) R2dN8 : 0.0191 R2N8 : 0.0148
σ : 0.299
deviance : 40.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.34 0.291 2.9 -0.00522 0.127 -0.195 0.0703 1.07 0.0812 9.08 1 16 -- --
39.32 0.292 2.89 0.0373 0.134 -0.117 0.0908 -- 0.0931 8.95 1.1 16 -- --
38.36 0.288 2.9 -0.00281 0.127 -0.192 -- 1.07 0.0812 8.94 1.015 16 -- --
39.34 0.292 2.89 0.0409 0.136 -0.111 -- -- 0.0929 8.65 1.076 16 -- --
39.27 0.292 2.9 -0.00758 -- -0.217 -- 1.13 0.0814 -- 1.075 16 -- --
39.61 0.295 2.89 0.0535 0.151 -- 0.0329 -- 0.0917 8.03 -- -- -- --
39.61 0.295 2.89 0.0543 0.151 -- -- -- 0.0916 7.95 -- -- -- --
40.36 0.296 2.89 0.0376 -- -0.138 -- -- 0.0941 -- 1.058 16 -- --
39.39 0.292 2.89 -- 0.135 -0.117 -- -- 0.0884 8.67 1.1 16 -- --
40.86 0.299 2.89 0.0558 -- -- -- -- 0.0936 -- -- -- -- --
39.69 0.295 2.89 -- 0.152 -- -- -- 0.0856 7.93 -- -- -- --
40.4 0.296 2.89 -- -- -0.143 -- -- 0.09 -- 1.025 16 -- --
40.94 0.299 2.89 -- -- -- -- -- 0.0874 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.37 temperature 10.0 1440 > th dose independent rect. 9 1
4 35.37 atmosphere 995.0 1440 > th dose independent rect. 9 1
7 35.37 atmosphere 1015.0 1440 < th dose independent rect. 9 1
8 35.37 temperature 10.0 1440 > th dose independent rect. 10 23
11 35.39 temperature 25.0 90 > th dose dependent rect. 2 1
12 35.44 temperature 25.0 30 > th dose independent rect. 8 1
13 35.47 humidity 80.0 30 < th dose independent rect. 8 1
14 35.47 atmosphere 1005.0 30 > th dose dependent rect. 8 1
15 35.48 temperature 25.0 30 > th dose dependent rect. 8 1
17 35.51 humidity 90.0 30 < th dose dependent rect. 8 1
19 35.53 atmosphere 1005.0 30 > th dose independent rect. 8 1
24 35.56 radiation 10.0 30 > th dose independent rect. 8 1
26 35.57 wind 1.0 30 > th dose independent rect. 8 1
27 35.57 radiation 30.0 30 < th dose independent rect. 8 1
28 35.59 wind 5.0 30 < th dose independent rect. 8 1
31 35.60 humidity 70.0 30 > th dose independent rect. 8 1
33 35.60 radiation 1.0 30 > th dose dependent rect. 8 1
36 35.61 temperature 10.0 30 > th dose independent rect. 8 1
38 35.61 temperature 30.0 30 < th dose independent rect. 8 1
39 35.61 humidity 50.0 30 > th dose independent rect. 8 1
42 35.61 atmosphere 1010.0 30 < th dose independent rect. 8 1
45 35.61 precipitation 0.1 30 < th dose independent rect. 8 1
46 35.61 temperature 10.0 30 > th dose independent rect. 9 23
47 35.61 wind 1.0 30 > th dose dependent rect. 8 1
48 35.61 precipitation 0.1 30 < th dose dependent rect. 8 1
49 35.62 wind 7.0 30 < th dose dependent rect. 8 1
53 35.65 radiation 40.0 30 < th dose dependent rect. 8 1
58 35.70 humidity 50.0 30 > th dose dependent rect. 8 1
60 35.72 wind 9.0 30 < th dose independent rect. 9 23
66 35.85 atmosphere 1015.0 30 < th dose dependent rect. 8 1
72 35.94 temperature 20.0 30 > th dose independent rect. 2 1
76 35.97 humidity 80.0 30 > th dose independent rect. 2 1
77 35.97 atmosphere 1005.0 30 > th dose independent rect. 2 1
78 35.97 wind 3.0 30 < th dose dependent rect. 2 1
80 35.97 atmosphere 1000.0 30 > th dose dependent rect. 2 1
83 35.98 humidity 70.0 30 > th dose dependent rect. 2 1
85 35.99 wind 3.0 30 < th dose independent rect. 2 1
89 35.99 humidity 50.0 30 > th dose dependent rect. 2 1
96 36.01 temperature 10.0 30 > th dose independent rect. 2 1
98 36.01 temperature 30.0 30 < th dose independent rect. 2 1
99 36.01 humidity 50.0 30 > th dose independent rect. 2 1
103 36.01 atmosphere 1010.0 30 < th dose independent rect. 2 1
105 36.01 radiation 1.0 30 < th dose independent rect. 2 1
110 36.01 precipitation 0.1 30 < th dose independent rect. 2 1
111 36.01 temperature 10.0 30 > th dose independent rect. 3 23
113 36.01 radiation 1.0 30 < th dose dependent rect. 2 1
118 36.01 precipitation 0.1 30 < th dose dependent rect. 2 1
123 36.06 temperature 30.0 30 < th dose dependent rect. 8 1
128 36.11 atmosphere 1015.0 30 < th dose dependent rect. 2 1
138 36.22 temperature 30.0 30 < th dose dependent rect. 2 1
164 36.32 wind 1.0 30 > th dose independent rect. 2 1
217 36.62 wind 9.0 1440 < th dose independent rect. 3 1
218 36.62 temperature 10.0 1440 > th dose independent rect. 3 1
221 36.62 temperature 30.0 1440 < th dose independent rect. 3 1
225 36.62 humidity 50.0 1440 > th dose independent rect. 3 1
234 36.62 atmosphere 995.0 1440 > th dose independent rect. 3 1
235 36.62 radiation 1.0 1440 < th dose independent rect. 3 1
255 36.62 temperature 10.0 1440 > th dose independent rect. 4 23
258 36.62 radiation 1.0 1440 < th dose dependent rect. 3 1
280 36.81 wind 9.0 30 < th dose independent rect. 3 23
282 36.83 wind 1.0 10 > th dose independent rect. 9 23
287 36.90 precipitation 0.1 30 < th dose independent rect. 9 23
288 36.90 precipitation 0.1 30 < th dose dependent rect. 9 23
294 37.02 atmosphere 995.0 30 > th dose independent rect. 3 23
301 37.18 atmosphere 995.0 30 > th dose independent rect. 9 23
313 37.23 humidity 50.0 1440 > th dose independent rect. 9 1
325 37.38 precipitation 0.1 30 < th dose independent rect. 3 23
327 37.38 precipitation 0.1 30 < th dose dependent rect. 3 23
336 37.47 atmosphere 1000.0 90 < th dose independent rect. 2 2
338 37.47 atmosphere 1000.0 90 < th dose dependent rect. 2 2
340 37.48 atmosphere 1000.0 10 < th dose independent rect. 3 1
350 37.48 atmosphere 1000.0 10 < th dose dependent rect. 3 1
360 37.49 wind 1.0 10 < th dose independent rect. 9 3
367 37.51 humidity 60.0 1440 > th dose independent rect. 4 5
383 37.61 wind 1.0 10 < th dose independent rect. 9 18
413 37.72 humidity 60.0 1440 > th dose independent rect. 1 8
416 37.73 wind 1.0 10 < th dose independent rect. 2 8
453 37.81 atmosphere 1015.0 30 < th dose independent rect. 9 23
454 37.81 humidity 60.0 4320 < th dose dependent rect. 8 1
468 37.82 humidity 60.0 4320 < th dose independent rect. 8 1
481 37.82 humidity 50.0 30 > th dose independent rect. 9 23
482 37.83 wind 1.0 10 < th dose independent rect. 9 16
491 37.85 atmosphere 1000.0 30 > th dose independent rect. 3 5
492 37.85 humidity 80.0 90 < th dose independent rect. 22 11
496 37.85 wind 1.0 10 < th dose dependent rect. 9 3
512 37.87 humidity 60.0 10 < th dose independent rect. 9 1
563 37.88 humidity 60.0 270 < th dose independent rect. 8 1
648 37.88 humidity 60.0 10 < th dose dependent rect. 9 1
764 37.88 humidity 60.0 10 < th dose dependent rect. 16 18
775 37.89 wind 1.0 10 < th dose dependent rect. 9 15
862 37.96 humidity 60.0 1440 > th dose independent rect. 23 10
871 37.96 humidity 90.0 30 < th dose dependent rect. 23 11
872 37.97 wind 1.0 10 < th dose independent sin 19 NA
877 37.97 humidity 60.0 1440 > th dose independent rect. 21 12
880 37.97 radiation 40.0 30 > th dose dependent rect. 9 1
905 37.98 atmosphere 995.0 30 > th dose dependent rect. 3 5
906 37.98 humidity 80.0 10 < th dose dependent rect. 21 13
910 37.99 humidity 80.0 10 < th dose dependent rect. 6 4
929 38.01 wind 1.0 10 < th dose independent rect. 2 11
966 38.03 humidity 50.0 30 > th dose independent rect. 3 23
979 38.03 radiation 20.0 30 < th dose dependent rect. 3 23