Os08g0239300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dienelactone hydrolase domain containing protein.
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Os08g0239300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dienelactone hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.13 | 0.316 | 2.83 | 0.12 | 0.0484 | 0.187 | 0.205 | 1.1 | -0.0112 | 3.62 | 36.2 | 71 | -- | -- |
| 47.43 | 0.323 | 2.82 | 0.119 | 0.0199 | 0.0565 | 0.325 | -- | 0.00127 | 9.03 | 36 | 71 | -- | -- |
| 45.24 | 0.313 | 2.83 | 0.124 | 0.051 | 0.195 | -- | 1.02 | -0.0107 | 3.36 | 35.99 | 71 | -- | -- |
| 47.44 | 0.321 | 2.82 | 0.141 | 0.0517 | 0.151 | -- | -- | -0.00751 | 3.16 | 36.16 | 70 | -- | -- |
| 45.36 | 0.314 | 2.83 | 0.121 | -- | 0.162 | -- | 1.02 | -0.0109 | -- | 35.99 | 71 | -- | -- |
| 47.54 | 0.323 | 2.82 | 0.119 | 0.0327 | -- | 0.324 | -- | -0.000429 | 9.17 | -- | -- | -- | -- |
| 47.91 | 0.324 | 2.82 | 0.13 | 0.0336 | -- | -- | -- | -0.000371 | 8.14 | -- | -- | -- | -- |
| 47.57 | 0.321 | 2.82 | 0.134 | -- | 0.118 | -- | -- | -0.00565 | -- | 36 | 71 | -- | -- |
| 47.92 | 0.322 | 2.83 | -- | 0.0527 | 0.141 | -- | -- | -0.0238 | 3.4 | 35.51 | 73 | -- | -- |
| 47.97 | 0.324 | 2.82 | 0.13 | -- | -- | -- | -- | 3.04e-05 | -- | -- | -- | -- | -- |
| 48.36 | 0.325 | 2.83 | -- | 0.0345 | -- | -- | -- | -0.0149 | 7.86 | -- | -- | -- | -- |
| 48.05 | 0.323 | 2.83 | -- | -- | 0.111 | -- | -- | -0.0205 | -- | 36 | 71 | -- | -- |
| 48.42 | 0.325 | 2.83 | -- | -- | -- | -- | -- | -0.0144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.15 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 16 | 37.38 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 46 | 42.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 62 | 42.95 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 67 | 43.46 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 74 | 43.59 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 75 | 43.59 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 76 | 43.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 83 | 43.68 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 103 | 43.75 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 134 | 43.84 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 168 | 43.94 | radiation | 40.0 | 30 | > th | dose independent | rect. | 13 | 21 |
| 190 | 44.13 | radiation | 40.0 | 30 | > th | dose independent | sin | 12 | NA |
| 203 | 44.15 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 246 | 44.39 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 279 | 44.52 | radiation | 40.0 | 30 | < th | dose independent | sin | 12 | NA |
| 281 | 44.52 | wind | 5.0 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 286 | 44.54 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 294 | 44.59 | radiation | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 340 | 44.62 | wind | 5.0 | 720 | > th | dose independent | rect. | 2 | 1 |
| 432 | 44.73 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 481 | 44.84 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 544 | 45.04 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 583 | 45.12 | wind | 7.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 584 | 45.12 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 585 | 45.13 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 586 | 45.13 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 597 | 45.17 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 599 | 45.18 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 641 | 45.31 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 659 | 45.32 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 678 | 45.34 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 726 | 45.37 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 734 | 45.38 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 735 | 45.38 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 758 | 45.41 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 785 | 45.42 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 793 | 45.44 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 7 | 1 |
| 800 | 45.45 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 865 | 45.50 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 13 | 22 |
| 866 | 45.51 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 868 | 45.51 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 870 | 45.51 | humidity | 50.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 903 | 45.51 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 905 | 45.51 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 911 | 45.51 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 12 | 2 |
| 944 | 45.52 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 4 | 1 |