Os11g0275200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-).
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Os11g0275200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312 | 0.83 | 8.5 | -4.42 | 1.33 | -6 | 0.226 | -0.499 | -1.39 | 8.67 | 30.65 | 744 | -- | -- |
| 307.99 | 0.817 | 8.51 | -4.58 | 0.748 | -5.68 | -0.0164 | -- | -1.28 | 12.2 | 34 | 1096 | -- | -- |
| 311.08 | 0.821 | 8.5 | -4.43 | 1.25 | -5.93 | -- | -0.461 | -1.36 | 9.28 | 31.1 | 816 | -- | -- |
| 307.66 | 0.817 | 8.5 | -4.52 | 0.729 | -5.62 | -- | -- | -1.26 | 12.1 | 44.29 | 1091 | -- | -- |
| 318.55 | 0.831 | 8.51 | -4.49 | -- | -5.25 | -- | -0.372 | -1.25 | -- | 35.1 | 1397 | -- | -- |
| 790.93 | 1.32 | 8.29 | -2.88 | 0.0999 | -- | 0.275 | -- | -0.298 | 0.0454 | -- | -- | -- | -- |
| 791.23 | 1.32 | 8.3 | -2.89 | 0.101 | -- | -- | -- | -0.299 | 0.879 | -- | -- | -- | -- |
| 318.03 | 0.831 | 8.51 | -4.55 | -- | -5.25 | -- | -- | -1.26 | -- | 48.44 | 1392 | -- | -- |
| 777.37 | 1.3 | 8.32 | -- | 0.641 | -3.8 | -- | -- | -0.456 | 11.1 | 35.1 | 949 | -- | -- |
| 791.87 | 1.31 | 8.29 | -2.89 | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
| 1011.5 | 1.49 | 8.22 | -- | 0.0642 | -- | -- | -- | 0.0225 | 22.8 | -- | -- | -- | -- |
| 788.8 | 1.31 | 8.33 | -- | -- | -3.38 | -- | -- | -0.472 | -- | 51.23 | 1254 | -- | -- |
| 1011.75 | 1.48 | 8.22 | -- | -- | -- | -- | -- | 0.0228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 308.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 2 | 308.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 3 | 308.96 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 22 | 310.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 26 | 310.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 74 | 311.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 85 | 312.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 98 | 312.80 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 100 | 312.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 106 | 312.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 118 | 313.07 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 123 | 313.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 125 | 313.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 150 | 313.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 167 | 314.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 259 | 316.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 278 | 316.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 363 | 316.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 755 | 322.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 852 | 324.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 912 | 324.92 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |