Os08g0239100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0239100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.7 | 0.695 | 6.23 | 0.262 | 0.147 | 1.37 | 0.83 | 1.65 | -0.321 | 9.66 | 22.07 | 1474 | -- | -- |
| 219 | 0.689 | 6.17 | 0.701 | 0.0905 | 1.25 | -0.782 | -- | -0.189 | 20.8 | 22.2 | 789 | -- | -- |
| 216.57 | 0.685 | 6.22 | 0.317 | 0.0348 | 1.32 | -- | 1.47 | -0.292 | 18.2 | 21.91 | 905 | -- | -- |
| 221.06 | 0.692 | 6.19 | 0.721 | 0.153 | 1.26 | -- | -- | -0.209 | 19.5 | 22.2 | 790 | -- | -- |
| 216.64 | 0.686 | 6.23 | 0.321 | -- | 1.32 | -- | 1.45 | -0.325 | -- | 21.9 | 877 | -- | -- |
| 287.92 | 0.795 | 6.28 | 0.288 | 0.175 | -- | 0.695 | -- | -0.63 | 10.7 | -- | -- | -- | -- |
| 289.49 | 0.797 | 6.28 | 0.32 | 0.189 | -- | -- | -- | -0.626 | 12.6 | -- | -- | -- | -- |
| 222.12 | 0.694 | 6.19 | 0.709 | -- | 1.22 | -- | -- | -0.217 | -- | 22.2 | 801 | -- | -- |
| 234.01 | 0.712 | 6.21 | -- | 0.104 | 1.13 | -- | -- | -0.277 | 19.3 | 22.5 | 803 | -- | -- |
| 291.73 | 0.798 | 6.28 | 0.313 | -- | -- | -- | -- | -0.629 | -- | -- | -- | -- | -- |
| 292.19 | 0.8 | 6.28 | -- | 0.184 | -- | -- | -- | -0.662 | 12.5 | -- | -- | -- | -- |
| 234.4 | 0.713 | 6.21 | -- | -- | 1.08 | -- | -- | -0.33 | -- | 22.38 | 801 | -- | -- |
| 294.32 | 0.801 | 6.29 | -- | -- | -- | -- | -- | -0.664 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.60 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 3 | 218.39 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 5 | 218.47 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 8 | 218.72 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 31 | 220.46 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 34 | 220.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 36 | 220.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 37 | 220.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 38 | 220.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 40 | 220.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 41 | 220.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 43 | 221.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 50 | 221.77 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 62 | 222.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 70 | 222.80 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 74 | 222.90 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 126 | 224.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 158 | 224.66 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 179 | 224.97 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 184 | 225.03 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 210 | 225.31 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 214 | 225.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 215 | 225.41 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 258 | 225.84 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 266 | 225.87 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 270 | 225.89 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 302 | 226.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 330 | 226.34 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 369 | 226.65 | temperature | 15.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 377 | 226.71 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 381 | 226.72 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 477 | 227.45 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 505 | 227.71 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 745 | 228.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 750 | 228.96 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 774 | 229.11 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 812 | 229.28 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 831 | 229.34 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 17 |