Os05g0399200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-).
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Os05g0399200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.86 | 0.37 | 7.79 | 1.61 | 0.969 | 1.13 | 0.102 | -0.89 | 0.0353 | 14.8 | 80.85 | 1148 | -- | -- |
| 62.63 | 0.369 | 7.77 | 1.68 | 0.966 | 1.11 | 0.25 | -- | 0.0568 | 14.6 | 81 | 1069 | -- | -- |
| 61.6 | 0.366 | 7.78 | 1.6 | 0.987 | 1.22 | -- | -1.12 | 0.0334 | 14.5 | 81.28 | 1075 | -- | -- |
| 62.81 | 0.369 | 7.77 | 1.69 | 0.962 | 1.11 | -- | -- | 0.0506 | 14.5 | 81 | 1063 | -- | -- |
| 82.96 | 0.424 | 7.78 | 1.76 | -- | 1.18 | -- | -0.504 | 0.0122 | -- | 87.25 | 280 | -- | -- |
| 85.83 | 0.434 | 7.79 | 1.85 | 0.794 | -- | 0.0472 | -- | 0.0136 | 15.6 | -- | -- | -- | -- |
| 85.84 | 0.434 | 7.78 | 1.85 | 0.794 | -- | -- | -- | 0.0139 | 15.6 | -- | -- | -- | -- |
| 83.3 | 0.425 | 7.78 | 1.77 | -- | 1.16 | -- | -- | 0.00299 | -- | 87.52 | 265 | -- | -- |
| 134.42 | 0.54 | 7.8 | -- | 0.978 | 1.45 | -- | -- | -0.0917 | 14.3 | 77.74 | 1070 | -- | -- |
| 120.89 | 0.514 | 7.78 | 1.82 | -- | -- | -- | -- | -0.00724 | -- | -- | -- | -- | -- |
| 176.44 | 0.621 | 7.83 | -- | 0.757 | -- | -- | -- | -0.193 | 15.6 | -- | -- | -- | -- |
| 164.33 | 0.597 | 7.82 | -- | -- | 1.28 | -- | -- | -0.159 | -- | 82 | 278 | -- | -- |
| 208.34 | 0.674 | 7.83 | -- | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.93 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 10 | 64.72 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 11 | 64.95 | humidity | 80 | 720 | < th | dose dependent | sin | 13 | NA |
| 15 | 65.05 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 16 | 65.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 17 | 65.09 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 26 | 65.16 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 32 | 65.20 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 33 | 65.21 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 11 |
| 40 | 65.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 48 | 65.30 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 21 |
| 86 | 65.40 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 95 | 65.41 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 19 |
| 108 | 65.43 | humidity | 50 | 720 | > th | dose dependent | sin | 18 | NA |
| 126 | 65.46 | humidity | 80 | 1440 | < th | dose dependent | sin | 1 | NA |
| 134 | 65.47 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 135 | 65.47 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 224 | 65.64 | humidity | 90 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 244 | 65.67 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 247 | 65.70 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 20 |
| 257 | 65.71 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 278 | 65.81 | humidity | 90 | 720 | < th | dose dependent | sin | 17 | NA |
| 281 | 65.82 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 288 | 65.83 | humidity | 50 | 720 | > th | dose dependent | rect. | 10 | 17 |
| 292 | 65.85 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 18 |
| 296 | 65.85 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 312 | 65.90 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 13 |
| 563 | 66.52 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 20 |
| 571 | 66.53 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 588 | 66.56 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 657 | 66.66 | humidity | 70 | 720 | > th | dose independent | sin | 16 | NA |
| 664 | 66.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 683 | 66.69 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 761 | 66.80 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 774 | 66.83 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 819 | 66.90 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 8 |
| 853 | 66.96 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 870 | 66.97 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 953 | 66.98 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 977 | 67.00 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |