Os08g0238200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dienelactone hydrolase domain containing protein.
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Os08g0238200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dienelactone hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 510.56 | 1.06 | 8.28 | -7.17 | 2.34 | 2.79 | 0.208 | -9.92 | -0.476 | 22.9 | 28.34 | 1217 | -- | -- |
| 520.09 | 1.06 | 8.07 | -5.23 | 2.29 | 1.76 | -0.141 | -- | -0.339 | 23 | 27.75 | 1176 | -- | -- |
| 510.47 | 1.05 | 8.28 | -7.13 | 2.32 | 2.82 | -- | -9.67 | -0.502 | 22.9 | 28.11 | 1200 | -- | -- |
| 519.69 | 1.06 | 8.07 | -5.23 | 2.31 | 1.73 | -- | -- | -0.338 | 22.9 | 27.9 | 1176 | -- | -- |
| 744.28 | 1.27 | 8.39 | -7.45 | -- | 4.16 | -- | -9.58 | -1.29 | -- | 24.63 | 941 | -- | -- |
| 648.09 | 1.19 | 8.08 | -4.69 | 2.62 | -- | 0.422 | -- | -0.386 | 23.1 | -- | -- | -- | -- |
| 648.85 | 1.19 | 8.08 | -4.71 | 2.61 | -- | -- | -- | -0.387 | 23 | -- | -- | -- | -- |
| 763.58 | 1.29 | 8.1 | -5.49 | -- | 3.27 | -- | -- | -0.72 | -- | 24.41 | 931 | -- | -- |
| 922.01 | 1.41 | 7.77 | -- | 2.65 | -2.84 | -- | -- | 0.983 | 23.1 | 4.929 | 47520 | -- | -- |
| 1074.38 | 1.53 | 8.02 | -4.65 | -- | -- | -- | -- | -0.367 | -- | -- | -- | -- | -- |
| 1232.37 | 1.64 | 7.97 | -- | 2.57 | -- | -- | -- | 0.137 | 22.9 | -- | -- | -- | -- |
| 1359.99 | 1.72 | 7.72 | -- | -- | -2.71 | -- | -- | 0.959 | -- | 5.051 | 47520 | -- | -- |
| 1643.69 | 1.89 | 7.9 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 510.13 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 5 | 512.79 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 7 | 513.33 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 11 | 514.23 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 24 | 516.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 26 | 516.45 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 52 | 517.87 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 120 | 520.81 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 145 | 521.96 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 146 | 522.06 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 16 |
| 153 | 522.36 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 158 | 522.63 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 180 | 523.05 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 302 | 525.24 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 398 | 525.48 | humidity | 60 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 405 | 525.79 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 429 | 526.25 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 432 | 526.34 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 434 | 526.38 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 456 | 526.65 | humidity | 60 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 479 | 527.00 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 483 | 527.17 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 16 |
| 499 | 527.36 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 501 | 527.38 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 513 | 527.39 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 549 | 527.65 | humidity | 60 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 613 | 528.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 618 | 529.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 619 | 529.04 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 623 | 529.09 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 635 | 529.13 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 636 | 529.14 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 647 | 529.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 663 | 529.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 709 | 529.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 761 | 530.52 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 10 |
| 768 | 530.63 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 782 | 530.67 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 840 | 531.00 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 861 | 531.09 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 910 | 531.48 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 924 | 531.68 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 941 | 531.74 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 945 | 531.79 | humidity | 50 | 90 | > th | dose dependent | rect. | 19 | 7 |
| 995 | 532.03 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |