BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0150500 Os05g0150500|012-047-A11
(255 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK121600 495 e-140
Os05g0150500 Conserved hypothetical protein 493 e-140
Os04g0395600 Similar to TRANSPORT INHIBITOR RESPONSE 1 prot... 291 2e-79
Os11g0515500 Similar to TRANSPORT INHIBITOR RESPONSE 1 prot... 281 3e-76
Os02g0759700 Leucine-rich repeat 2 containing protein 229 2e-60
Os03g0187500 Leucine-rich repeat, cysteine-containing subty... 224 4e-59
Os11g0462900 NB-ARC domain containing protein 208 4e-54
Os03g0265500 Similar to Coronatine-insensitive 1 110 1e-24
Os05g0449500 Similar to Coronatine-insensitive 1 92 4e-19
Os01g0853400 Similar to Coronatine-insensitive protein 1 (F... 89 3e-18
>AK121600
Length = 462
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/255 (95%), Positives = 243/255 (95%)
Query: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRM 60
MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRM
Sbjct: 208 MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRM 267
Query: 61 TNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXXXT 120
TNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESC T
Sbjct: 268 TNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLT 327
Query: 121 DLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAK 180
DLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAK
Sbjct: 328 DLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAK 387
Query: 181 LETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRT 240
LETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRT
Sbjct: 388 LETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRT 447
Query: 241 IAGPRSDTPACVQIV 255
IAGPRSDTPACVQIV
Sbjct: 448 IAGPRSDTPACVQIV 462
>Os05g0150500 Conserved hypothetical protein
Length = 255
Score = 493 bits (1270), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/255 (95%), Positives = 243/255 (95%)
Query: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRM 60
MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRM
Sbjct: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRM 60
Query: 61 TNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXXXT 120
TNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESC T
Sbjct: 61 TNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLT 120
Query: 121 DLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAK 180
DLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAK
Sbjct: 121 DLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAK 180
Query: 181 LETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRT 240
LETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRT
Sbjct: 181 LETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRT 240
Query: 241 IAGPRSDTPACVQIV 255
IAGPRSDTPACVQIV
Sbjct: 241 IAGPRSDTPACVQIV 255
>Os04g0395600 Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat
protein 1)
Length = 575
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/258 (58%), Positives = 182/258 (70%), Gaps = 3/258 (1%)
Query: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGF--LTERGLVDVSASCPMLESVLYFCR 58
+D I D GL VVASSC LQELRVFPSD + AG+ +TE GLV VS CP L S+LYFC
Sbjct: 318 LDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLVAVSLGCPKLNSLLYFCH 377
Query: 59 RMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXX 118
+MTN AL+T+AKN PNFT FRLCILEP PD +T +PLD GF AIV C
Sbjct: 378 QMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGL 437
Query: 119 XTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANA 178
TD VF IG +A +LEMLSIAFAG+SD G+ ++++GCK+L+KLEIRD PFGD LL N
Sbjct: 438 LTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNF 497
Query: 179 AKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETP-VEKLYV 237
A+ ETMRSLWMSSC +TL C+ LA KMP L+VE++N+ S ++ + P VEKLYV
Sbjct: 498 ARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKLYV 557
Query: 238 YRTIAGPRSDTPACVQIV 255
YRT AG R D P V+I+
Sbjct: 558 YRTTAGARDDAPNFVKIL 575
>Os11g0515500 Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat
protein 1)
Length = 576
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/250 (55%), Positives = 176/250 (70%), Gaps = 1/250 (0%)
Query: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPFG-AGFLTERGLVDVSASCPMLESVLYFCRR 59
+D I D GL +VASSC +LQELRVFP++ A +TE GLV +SA C L+SVLYFC+R
Sbjct: 321 LDHIGDEGLKIVASSCIQLQELRVFPANANARASTVTEEGLVAISAGCNKLQSVLYFCQR 380
Query: 60 MTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXXX 119
MTN ALIT+AKN P FT FRLC+L+P + D +T +PLD G+ AIV+SC
Sbjct: 381 MTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLL 440
Query: 120 TDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAA 179
TD VF IG +A+RLEMLS+AFAG++D G+ Y+L+GCK+LKKLEIRD PFGD LLA
Sbjct: 441 TDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMH 500
Query: 180 KLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYR 239
+ E MRSLW+SSC +TLG C+ LA M L++E+MN D+ D V+KLY+YR
Sbjct: 501 QYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNANDAKKVKKLYIYR 560
Query: 240 TIAGPRSDTP 249
T+AGPR D P
Sbjct: 561 TVAGPRGDAP 570
>Os02g0759700 Leucine-rich repeat 2 containing protein
Length = 637
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 159/257 (61%), Gaps = 7/257 (2%)
Query: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPF--GAGFLTERGLVDVSASCPMLESVLYFCR 58
+D + D GL VA +C+ L+ELRVFP D G +++ GL +S C LES+LYFC+
Sbjct: 386 LDTVGDEGLRAVAETCSDLRELRVFPFDATEDSEGSVSDVGLQAISEGCRKLESILYFCQ 445
Query: 59 RMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXX 118
RMTN A+I ++KN + FRLCI+ H PD IT EP+D GF AIV +C
Sbjct: 446 RMTNAAVIAMSKNCSDLVTFRLCIMGRHRPDRITGEPMDDGFGAIVMNCKKLTRLSVSGL 505
Query: 119 XTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANA 178
TD F IG + ++ LS+AFAGNSD+ L + GC L+KLE+RD PF DK LL+
Sbjct: 506 LTDKAFAYIGKYGKLIKTLSVAFAGNSDMSLQSVFEGCTRLQKLEVRDSPFSDKGLLSGL 565
Query: 179 AKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVY 238
+ MR LWM+SC LT+ CR +A++MP L VE+M D LD + V+KLY+Y
Sbjct: 566 SYFYNMRFLWMNSCRLTMRGCRDVAQQMPDLVVEVMKD-----HLDDEGEMETVDKLYLY 620
Query: 239 RTIAGPRSDTPACVQIV 255
R++AG R+D P+ V I+
Sbjct: 621 RSLAGARNDAPSFVNIL 637
>Os03g0187500 Leucine-rich repeat, cysteine-containing subtype containing protein
Length = 252
Score = 224 bits (571), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 154/257 (59%), Gaps = 8/257 (3%)
Query: 1 MDLIEDHGLAVVASSCNKLQELRVFPSDPFGAG--FLTERGLVDVSASCPMLESVLYFCR 58
+D + D GL A +C KLQ L V P + ++E GL ++ C L S LYFC+
Sbjct: 2 LDSVRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRSTLYFCQ 61
Query: 59 RMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXX 118
MTN A+I I++N + FRLCI+ H PD++T EP+D GF AIV +C
Sbjct: 62 SMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSGH 121
Query: 119 XTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANA 178
TD F+ IG +A L LS+AFAG+S+L L +IL GC L+KLEIRDCPFGD LL+
Sbjct: 122 LTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLLSGM 181
Query: 179 AKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVY 238
MR LWMS C LTL C+++AR++PRL VE++N + DS V+ LY+Y
Sbjct: 182 HHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELINSQPENERTDS------VDILYMY 235
Query: 239 RTIAGPRSDTPACVQIV 255
R++ GPR D P V+I+
Sbjct: 236 RSLEGPREDVPPFVKIL 252
>Os11g0462900 NB-ARC domain containing protein
Length = 1261
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 155/256 (60%), Gaps = 6/256 (2%)
Query: 2 DLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLT--ERGLVDVSASCPMLESVLYFCRR 59
D I D GL+ +A +C LQ+LRV+ L+ + GL +S C L+++ Y+C
Sbjct: 1010 DSIGDDGLSAIAETCLDLQDLRVYRLLRGSEHHLSVSDVGLETISKGCQKLKTLTYYCGS 1069
Query: 60 MTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXXXXX 119
MTN A++ ++ N PN FRL IL+ + PD IT EP+D GF AIV +C
Sbjct: 1070 MTNAAMVIMSSNCPNLEVFRLSILKTYLPDRITGEPMDEGFGAIVMNCKKLSRLSTSGLV 1129
Query: 120 TDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAA 179
TD F IG + ++ LS+AF+GN+D+ L Y+ GC L+KLE+R+CPFGD+ LL+ +
Sbjct: 1130 TDKAFAYIGQYGKSIKTLSVAFSGNTDMSLRYVFEGCTRLQKLEVRECPFGDEGLLSGLS 1189
Query: 180 KLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYR 239
MR LWMSSC +T+ CR +A++MP L E+++ G S D D V+ LY+YR
Sbjct: 1190 HFWNMRFLWMSSCRVTMTGCRYVAQQMPNLVAEVIS--GHSGNEDVTADN--VDHLYLYR 1245
Query: 240 TIAGPRSDTPACVQIV 255
++AGPR D P+ V+I+
Sbjct: 1246 SLAGPRDDAPSFVKIL 1261
>Os03g0265500 Similar to Coronatine-insensitive 1
Length = 589
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 19/261 (7%)
Query: 2 DLIEDHGLAVVASSCNKLQELRVFPSDPFGAGF------LTERGLVDVSASCPMLESVLY 55
D+I D GL VVA +C KLQ LRV D G +T+ GL+ V+ CP LE
Sbjct: 331 DVIGDRGLEVVAQTCKKLQRLRVERGDDDQGGLEDEHGMVTQVGLMAVAQGCPHLEYWAV 390
Query: 56 FCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXX 115
+TN AL I + FRL +L+ IT PLD G A++ C
Sbjct: 391 HVTDITNAALEAIGTYSSSLNDFRLVLLDREAN--ITESPLDNGVRALLRGCTKLRRFAF 448
Query: 116 XX---XXTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDK 172
+D+ IG + + + + G SD GL + +GC SL+KLE+R C F ++
Sbjct: 449 YVRPGALSDVGLGYIGEFSKTIRYMLLGNVGESDQGLLQLSTGCPSLQKLELRGCFFSER 508
Query: 173 PLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMN-DPGRSCPLDSLPDETP 231
L +L+++R LW+ + +A P ++EI+ + CP
Sbjct: 509 ALAVAVLQLKSLRYLWVQGYKASPNGTDLMAMVRPFWNIEIIAPNQDEVCP-------DG 561
Query: 232 VEKLYVYRTIAGPRSDTPACV 252
++ Y ++AG RSD P V
Sbjct: 562 QAQILAYYSLAGMRSDYPHSV 582
>Os05g0449500 Similar to Coronatine-insensitive 1
Length = 597
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 13/262 (4%)
Query: 2 DLIEDHGLAVVASSCNKLQELRVFPSD-----PFGAGFLTERGLVDVSASCPMLESVLYF 56
++I D GL VVA +C KLQ LRV D G +++ GL V+ C LE + +
Sbjct: 332 NVIGDRGLGVVADTCKKLQRLRVERGDDDPGLQEEQGGVSQVGLTTVAVGCRELEYIAAY 391
Query: 57 CRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXX 116
+TN AL +I N FRL +L+ + IT PLD G A++ C
Sbjct: 392 VSDITNGALESIGTFCKNLCDFRLVLLDRE--ERITDLPLDNGVRALLRGCTKLRRFALY 449
Query: 117 XX---XTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKP 173
+D IG ++ ++ + + G +D GL GC++L+KLE+R C F ++
Sbjct: 450 LRPGGLSDTGLGYIGQYSGIIQYMLLGNVGETDDGLIRFALGCENLRKLELRSCCFSEQA 509
Query: 174 LLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIM---NDPGRSCPLDSLPDET 230
L + ++R +W+ + + P ++E ++ D P
Sbjct: 510 LARAIRSMPSLRYVWVQGYKASKTGHDLMLMARPFWNIEFTPPSSENANRMREDGEPCVD 569
Query: 231 PVEKLYVYRTIAGPRSDTPACV 252
++ Y ++AG RSD P V
Sbjct: 570 SQAQILAYYSLAGKRSDCPRSV 591
>Os01g0853400 Similar to Coronatine-insensitive protein 1 (F-box/LRR-repeat
protein 2) (AtFBL2) (COI-1) (AtCOI1)
Length = 630
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 2 DLIEDHGLAVVASSCNKLQELRVFPSD-----PFGAGFLTERGLVDVSASCPMLESVLYF 56
++I D GL VV +C KL+ LR+ D G +++ GL V+ C LE + +
Sbjct: 365 NVIGDRGLEVVGDTCKKLRRLRIERGDDDPGLQEEQGGVSQLGLTAVAVGCRELEYIAAY 424
Query: 57 CRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCXXXXXXXXX 116
+TN AL +I N FRL +L+ +T PLD G A++ +C
Sbjct: 425 VSDITNGALESIGTFCKNLYDFRLVLLDRERQ--VTDLPLDNGVCALLRNCTKLRRFALY 482
Query: 117 XX---XTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKP 173
+D IG ++ ++ + + G SD GL GC +L+KLE+R C F ++
Sbjct: 483 LRPGGLSDDGLSYIGQYSGNIQYMLLGNVGESDHGLIRFAVGCTNLQKLELRSCCFSERA 542
Query: 174 LLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEI----------MNDPGRSCPL 223
L ++ ++R +W+ + L P ++E M + G C +
Sbjct: 543 LSLAVLQMPSLRYIWVQGYRASQTGLDLLLMARPFWNIEFTPPSPESFNHMTEDGEPC-V 601
Query: 224 DSLPDETPVEKLYVYRTIAGPRSDTPACV 252
DS ++ Y ++AG RSD P V
Sbjct: 602 DSHA------QVLAYYSLAGRRSDCPQWV 624
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,247,064
Number of extensions: 303242
Number of successful extensions: 923
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 901
Number of HSP's successfully gapped: 10
Length of query: 255
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 156
Effective length of database: 11,866,615
Effective search space: 1851191940
Effective search space used: 1851191940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 155 (64.3 bits)