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Os04g0395600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0207) R2 : 0.693
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.5 (0.0493) R2dC : 0.625 R2C : 0.609
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.429 (0.0436) R2dN8 : 0.084 R2N8 : 0.0678
σ : 0.391
deviance : 69.89
__
_____
C
peak time of C : 23.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.32 0.298 12.5 0.703 1.48 0.0567 -1.1 1.76 0.537 23.8 0.06228 4423 -- --
42.15 0.302 12.5 0.74 1.48 0.423 -1.1 -- 0.596 23.8 0.6201 2876 -- --
45.53 0.314 12.5 0.752 1.49 0.0532 -- 1.71 0.539 23.8 0.02585 4320 -- --
45.79 0.315 12.5 0.665 1.49 0.463 -- -- 0.566 23.8 0.5006 16799 -- --
179.95 0.625 12.4 0.919 -- -0.611 -- 3.61 0.532 -- -1.787 2980 -- --
45.49 0.316 12.5 0.819 1.49 -- -1.06 -- 0.52 23.8 -- -- -- --
50.33 0.332 12.5 0.861 1.49 -- -- -- 0.525 23.8 -- -- -- --
184.79 0.633 12.5 0.804 -- 0.964 -- -- 0.567 -- -1.272 575 -- --
52.57 0.338 12.5 -- 1.51 0.637 -- -- 0.548 23.9 1 33252 -- --
190.21 0.644 12.5 0.905 -- -- -- -- 0.544 -- -- -- -- --
69.89 0.391 12.5 -- 1.5 -- -- -- 0.429 23.8 -- -- -- --
193.55 0.648 12.5 -- -- 0.779 -- -- 0.585 -- 0.7953 22390 -- --
211.84 0.679 12.5 -- -- -- -- -- 0.443 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.14 humidity 70.0 1440 > th dose dependent rect. 11 1
4 38.65 humidity 90.0 1440 < th dose dependent rect. 11 1
5 39.02 humidity 80.0 1440 < th dose independent rect. 8 6
9 39.18 humidity 70.0 1440 > th dose dependent rect. 9 5
14 39.28 humidity 80.0 1440 > th dose independent rect. 8 6
20 39.34 humidity 80.0 1440 < th dose independent rect. 11 1
26 39.37 humidity 90.0 1440 < th dose dependent rect. 9 4
27 39.38 humidity 70.0 1440 > th dose independent rect. 11 1
40 39.47 precipitation 0.1 4320 > th dose dependent rect. 15 2
43 39.49 precipitation 0.1 4320 > th dose independent rect. 16 1
44 39.51 precipitation 0.1 4320 < th dose independent rect. 16 1
46 39.51 precipitation 0.1 4320 < th dose dependent rect. 16 1
52 39.53 humidity 60.0 10 > th dose dependent rect. 7 13
56 39.55 radiation 1.0 30 < th dose dependent sin 22 NA
67 39.62 radiation 1.0 90 < th dose dependent rect. 5 14
83 39.72 wind 1.0 43200 < th dose independent rect. 5 2
92 39.75 radiation 1.0 30 < th dose independent sin 22 NA
100 39.76 wind 1.0 14400 < th dose independent rect. 1 5
101 39.76 wind 3.0 14400 < th dose dependent rect. 2 3
121 39.79 precipitation 0.1 4320 > th dose independent rect. 12 5
124 39.80 wind 1.0 14400 > th dose independent rect. 1 5
151 39.85 radiation 1.0 90 > th dose independent sin 22 NA
172 39.89 radiation 1.0 90 < th dose independent rect. 5 14
181 39.90 precipitation 0.1 4320 > th dose dependent rect. 11 6
202 39.94 humidity 50.0 10 > th dose dependent sin 22 NA
204 39.94 precipitation 0.1 4320 > th dose dependent rect. 8 9
218 39.96 precipitation 0.1 4320 > th dose independent rect. 8 9
221 39.96 humidity 90.0 30 < th dose dependent rect. 11 7
235 39.98 precipitation 0.1 4320 < th dose independent rect. 8 9
238 39.98 precipitation 0.1 4320 < th dose dependent rect. 8 9
273 40.02 humidity 90.0 10 < th dose dependent sin 22 NA
286 40.03 wind 3.0 14400 < th dose dependent rect. 24 5
320 40.06 humidity 90.0 10 < th dose dependent rect. 11 23
345 40.10 wind 3.0 14400 < th dose dependent rect. 4 1
379 40.14 radiation 1.0 90 < th dose dependent rect. 7 12
385 40.15 humidity 80.0 1440 < th dose dependent sin 6 NA
398 40.17 precipitation 0.1 4320 > th dose independent sin 23 NA
399 40.17 precipitation 0.1 4320 < th dose independent sin 23 NA
400 40.17 humidity 70.0 30 < th dose independent rect. 11 7
407 40.17 precipitation 0.1 4320 < th dose dependent sin 23 NA
442 40.19 humidity 90.0 10 < th dose dependent rect. 24 18
443 40.19 humidity 90.0 10 < th dose dependent rect. 20 22
445 40.20 wind 1.0 14400 > th dose independent rect. 1 2
509 40.25 humidity 80.0 1440 < th dose independent sin 3 NA
518 40.25 humidity 70.0 1440 > th dose independent rect. 22 14
520 40.25 humidity 70.0 1440 > th dose independent rect. 20 16
545 40.26 precipitation 0.1 14400 > th dose dependent rect. 12 9
547 40.26 precipitation 0.1 4320 > th dose dependent rect. 24 22
548 40.27 humidity 80.0 1440 > th dose independent sin 2 NA
609 40.29 precipitation 0.1 4320 > th dose dependent rect. 7 22
610 40.30 wind 3.0 14400 < th dose independent rect. 24 1
631 40.31 precipitation 0.1 4320 < th dose independent rect. 24 22
640 40.31 precipitation 0.1 4320 < th dose dependent rect. 24 22
652 40.32 precipitation 0.1 4320 > th dose independent rect. 24 22
659 40.32 humidity 90.0 10 < th dose dependent rect. 3 15
660 40.32 humidity 90.0 10 < th dose dependent rect. 22 20
668 40.33 wind 1.0 4320 > th dose independent rect. 17 2
676 40.33 precipitation 0.1 4320 < th dose independent rect. 3 19
680 40.33 precipitation 0.1 14400 > th dose dependent sin 22 NA
688 40.33 humidity 90.0 10 < th dose dependent rect. 6 12
692 40.33 humidity 90.0 10 < th dose dependent rect. 11 17
694 40.33 precipitation 0.1 4320 > th dose dependent rect. 12 17
697 40.33 precipitation 0.1 4320 < th dose dependent rect. 3 19
699 40.33 humidity 90.0 10 < th dose dependent rect. 11 21
702 40.33 precipitation 0.1 4320 > th dose dependent rect. 12 22
703 40.33 precipitation 0.1 4320 > th dose dependent rect. 3 23
720 40.34 precipitation 0.1 4320 > th dose independent rect. 3 19
723 40.34 precipitation 0.1 4320 > th dose dependent no NA NA
732 40.34 humidity 90.0 10 < th dose dependent rect. 11 14
757 40.35 precipitation 0.1 4320 < th dose independent rect. 4 17
773 40.35 precipitation 0.1 4320 < th dose dependent rect. 4 17
782 40.35 precipitation 0.1 4320 > th dose dependent rect. 15 23
796 40.36 precipitation 0.1 4320 > th dose independent rect. 4 17
799 40.36 humidity 50.0 1440 > th dose dependent sin 3 NA
824 40.36 precipitation 0.1 4320 > th dose dependent rect. 19 23
825 40.37 humidity 70.0 1440 > th dose independent sin 7 NA
954 40.40 humidity 50.0 10 > th dose dependent rect. 13 23
971 40.41 humidity 90.0 270 < th dose dependent rect. 9 6