Os01g0853400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Coronatine-insensitive protein 1 (F-box/LRR-repeat protein 2) (AtFBL2) (COI-1) (AtCOI1).
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Os01g0853400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Coronatine-insensitive protein 1 (F-box/LRR-repeat protein 2) (AtFBL2) (COI-1) (AtCOI1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.05 | 0.226 | 12.4 | 0.469 | 0.995 | -0.62 | 0.0266 | -0.365 | 0.328 | 5.3 | 23.4 | 20 | -- | -- |
| 23.25 | 0.226 | 12.4 | 0.43 | 0.991 | -0.567 | -0.0368 | -- | 0.32 | 5.31 | 23.43 | 20 | -- | -- |
| 23.05 | 0.225 | 12.4 | 0.471 | 0.994 | -0.613 | -- | -0.361 | 0.328 | 5.29 | 23.4 | 20 | -- | -- |
| 23.25 | 0.226 | 12.4 | 0.43 | 0.991 | -0.565 | -- | -- | 0.32 | 5.31 | 23.5 | 18 | -- | -- |
| 73.4 | 0.401 | 12.5 | 0.58 | -- | 2.7 | -- | 7.49 | 0.41 | -- | 16.27 | 4 | -- | -- |
| 27.48 | 0.246 | 12.4 | 0.551 | 0.96 | -- | -0.0208 | -- | 0.402 | 5.64 | -- | -- | -- | -- |
| 27.48 | 0.245 | 12.4 | 0.551 | 0.96 | -- | -- | -- | 0.402 | 5.64 | -- | -- | -- | -- |
| 73.4 | 0.399 | 12.4 | 0.524 | -- | -0.847 | -- | -- | 0.41 | -- | 15.46 | 152 | -- | -- |
| 27.69 | 0.245 | 12.5 | -- | 1.01 | -0.693 | -- | -- | 0.253 | 5.26 | 23.63 | 25 | -- | -- |
| 75.33 | 0.406 | 12.4 | 0.582 | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
| 35.48 | 0.279 | 12.4 | -- | 0.969 | -- | -- | -- | 0.341 | 5.62 | -- | -- | -- | -- |
| 72.05 | 0.395 | 12.5 | -- | -- | -0.839 | -- | -- | 0.23 | -- | 22.34 | 7079 | -- | -- |
| 84.25 | 0.428 | 12.4 | -- | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 12 | 21.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 21 | 22.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 45 | 22.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 18 |
| 65 | 22.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 71 | 22.43 | temperature | 15 | 720 | > th | dose dependent | sin | 14 | NA |
| 84 | 22.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 92 | 22.50 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 115 | 22.57 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 119 | 22.58 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 125 | 22.59 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 126 | 22.59 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 128 | 22.59 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 129 | 22.60 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 250 | 22.79 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 262 | 22.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 263 | 22.80 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 271 | 22.81 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 277 | 22.82 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 279 | 22.82 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 286 | 22.82 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 296 | 22.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 16 | 12 |
| 310 | 22.86 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 320 | 22.87 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 350 | 22.90 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 374 | 22.92 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 382 | 22.93 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 415 | 22.95 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 432 | 22.96 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 21 |
| 439 | 22.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 441 | 22.97 | wind | 5 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 446 | 22.97 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 489 | 23.00 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 508 | 23.02 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 514 | 23.02 | wind | 5 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 545 | 23.04 | wind | 3 | 43200 | > th | dose dependent | sin | 17 | NA |
| 578 | 23.06 | wind | 5 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 593 | 23.07 | wind | 5 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 594 | 23.07 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 20 |
| 600 | 23.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 636 | 23.09 | wind | 5 | 14400 | > th | dose independent | sin | 0 | NA |
| 670 | 23.11 | wind | 7 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 686 | 23.12 | temperature | 10 | 10 | > th | dose dependent | sin | 10 | NA |
| 700 | 23.13 | wind | 5 | 14400 | < th | dose independent | sin | 0 | NA |
| 705 | 23.13 | temperature | 25 | 10 | < th | dose dependent | sin | 8 | NA |
| 720 | 23.14 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 738 | 23.15 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 739 | 23.15 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 769 | 23.16 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 840 | 23.20 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 854 | 23.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 875 | 23.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 900 | 23.23 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 928 | 23.24 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 954 | 23.25 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 977 | 23.26 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 3 |