Os11g0462900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NB-ARC domain containing protein.
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Os11g0462900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NB-ARC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.73 | 0.414 | 3.41 | 0.547 | 0.224 | 0.424 | 0.312 | 1.17 | -0.0444 | 2.05 | 0.09443 | 4420 | -- | -- |
| 78.51 | 0.413 | 3.42 | 0.612 | 0.232 | 0.47 | 0.326 | -- | -0.0303 | 2.02 | 0.1782 | 5461 | -- | -- |
| 78.1 | 0.412 | 3.42 | 0.537 | 0.223 | 0.431 | -- | 1.18 | -0.0457 | 2.17 | 0.2306 | 4422 | -- | -- |
| 78.9 | 0.414 | 3.42 | 0.61 | 0.232 | 0.47 | -- | -- | -0.0302 | 2.03 | 0.2385 | 5461 | -- | -- |
| 81.07 | 0.419 | 3.41 | 0.542 | -- | 0.432 | -- | 1.24 | -0.0399 | -- | 0.2567 | 4527 | -- | -- |
| 81.57 | 0.423 | 3.44 | 0.683 | 0.227 | -- | 0.377 | -- | -0.081 | 2.16 | -- | -- | -- | -- |
| 82.1 | 0.424 | 3.44 | 0.672 | 0.228 | -- | -- | -- | -0.0832 | 2.25 | -- | -- | -- | -- |
| 82.14 | 0.422 | 3.42 | 0.609 | -- | 0.472 | -- | -- | -0.0278 | -- | 0.3776 | 5405 | -- | -- |
| 85.57 | 0.431 | 3.44 | -- | 0.229 | 0.692 | -- | -- | -0.0953 | 2.11 | 0.3182 | 2459 | -- | -- |
| 85.2 | 0.431 | 3.44 | 0.682 | -- | -- | -- | -- | -0.0777 | -- | -- | -- | -- | -- |
| 94.02 | 0.454 | 3.45 | -- | 0.241 | -- | -- | -- | -0.158 | 2.31 | -- | -- | -- | -- |
| 88.52 | 0.438 | 3.44 | -- | -- | 0.737 | -- | -- | -0.08 | -- | 0.4297 | 2288 | -- | -- |
| 97.47 | 0.461 | 3.45 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 70.96 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 3 | 71.19 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 71.23 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 71.25 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 7 | 71.26 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 9 | 71.27 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 11 | 71.27 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 17 | 71.31 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 20 | 71.31 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 25 | 71.31 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 27 | 71.31 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 71.31 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 71.31 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 34 | 71.31 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 35 | 71.31 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 40 | 71.31 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 71.32 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 42 | 71.32 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 46 | 71.35 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 57 | 71.50 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 71.55 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 63 | 71.57 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 64 | 71.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 67 | 71.57 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 71 | 71.57 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 80 | 71.57 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 81 | 71.57 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 101 | 71.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 123 | 71.76 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 126 | 71.78 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 179 | 72.76 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 180 | 72.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 181 | 72.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 184 | 73.32 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 187 | 73.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 188 | 73.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 191 | 73.43 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 197 | 73.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 199 | 73.56 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 205 | 73.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 207 | 73.63 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 213 | 73.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 215 | 73.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 10 |
| 221 | 73.69 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 222 | 73.70 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 228 | 73.74 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 318 | 73.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 358 | 74.06 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 377 | 74.10 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 435 | 74.25 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 442 | 74.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 448 | 74.28 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 451 | 74.30 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 496 | 74.41 | wind | 1.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 510 | 74.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 511 | 74.45 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 515 | 74.45 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 535 | 74.51 | wind | 3.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 542 | 74.51 | wind | 9.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 593 | 74.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 604 | 74.58 | wind | 3.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 610 | 74.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 614 | 74.59 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 616 | 74.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 644 | 74.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 671 | 74.67 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 676 | 74.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 727 | 74.73 | wind | 3.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 817 | 74.82 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 859 | 74.87 | wind | 3.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 881 | 74.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 927 | 74.93 | wind | 3.0 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 979 | 74.98 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 989 | 74.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 996 | 74.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |