Os11g0515500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1).
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Os11g0515500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.6 | 0.26 | 9.93 | 1.36 | 0.369 | -0.564 | 0.529 | 1.48 | 0.416 | 19.7 | 25.49 | 96 | -- | -- |
| 31.33 | 0.261 | 9.95 | 1.2 | 0.362 | -0.454 | 0.567 | -- | 0.376 | 19.6 | 25.5 | 78 | -- | -- |
| 31.37 | 0.261 | 9.93 | 1.36 | 0.366 | -0.558 | -- | 1.57 | 0.42 | 19.6 | 25.46 | 91 | -- | -- |
| 32.22 | 0.264 | 9.95 | 1.18 | 0.354 | -0.419 | -- | -- | 0.374 | 19.8 | 25.46 | 70 | -- | -- |
| 37.05 | 0.285 | 9.93 | 1.32 | -- | -0.508 | -- | 1.64 | 0.398 | -- | 26.07 | 12 | -- | -- |
| 34.51 | 0.275 | 9.96 | 1.13 | 0.322 | -- | 0.37 | -- | 0.35 | 21.5 | -- | -- | -- | -- |
| 35.01 | 0.277 | 9.96 | 1.11 | 0.32 | -- | -- | -- | 0.35 | 21.7 | -- | -- | -- | -- |
| 37.9 | 0.288 | 9.94 | 1.16 | -- | -0.383 | -- | -- | 0.365 | -- | 25.7 | 7 | -- | -- |
| 67.27 | 0.384 | 9.98 | -- | 0.312 | -0.138 | -- | -- | 0.231 | 21.3 | 25.55 | 91 | -- | -- |
| 41.07 | 0.299 | 9.95 | 1.11 | -- | -- | -- | -- | 0.349 | -- | -- | -- | -- | -- |
| 67.57 | 0.385 | 9.98 | -- | 0.323 | -- | -- | -- | 0.226 | 21.9 | -- | -- | -- | -- |
| 72.86 | 0.399 | 9.97 | -- | -- | -0.209 | -- | -- | 0.23 | -- | 25.8 | 10 | -- | -- |
| 73.81 | 0.401 | 9.98 | -- | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 2 | 29.38 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 5 | 29.53 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 6 | 29.58 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 7 | 29.60 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 9 | 29.62 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 13 |
| 10 | 29.63 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 12 | 29.70 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 16 | 29.73 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 17 | 29.73 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 21 | 29.75 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 22 | 29.75 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 32 | 29.81 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 44 | 29.86 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 45 | 29.87 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 22 |
| 47 | 29.87 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 13 |
| 59 | 29.96 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 62 | 29.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 67 | 30.01 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 85 | 30.07 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 112 | 30.15 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 113 | 30.15 | temperature | 25.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 115 | 30.16 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 118 | 30.17 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 130 | 30.19 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 152 | 30.23 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 154 | 30.23 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 221 | 30.35 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 227 | 30.37 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 229 | 30.37 | temperature | 25.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 253 | 30.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 13 |
| 257 | 30.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 271 | 30.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 274 | 30.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 304 | 30.47 | humidity | 70.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 333 | 30.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 368 | 30.53 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 373 | 30.53 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 379 | 30.54 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 382 | 30.54 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 404 | 30.55 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 410 | 30.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 421 | 30.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 470 | 30.59 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 474 | 30.59 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 486 | 30.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 487 | 30.61 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 490 | 30.61 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 528 | 30.64 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 558 | 30.64 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 559 | 30.65 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 10 |
| 578 | 30.66 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 599 | 30.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 604 | 30.67 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 611 | 30.67 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 616 | 30.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 644 | 30.69 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 645 | 30.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 651 | 30.69 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 664 | 30.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 670 | 30.70 | humidity | 80.0 | 720 | < th | dose independent | rect. | 8 | 6 |
| 689 | 30.71 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 693 | 30.71 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 22 | NA |
| 800 | 30.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 858 | 30.76 | humidity | 70.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 879 | 30.77 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 902 | 30.77 | temperature | 30.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 917 | 30.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 977 | 30.79 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 20 | NA |
| 989 | 30.79 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 12 | NA |