Os05g0449500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Coronatine-insensitive 1.
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Os05g0449500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Coronatine-insensitive 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.23 | 0.34 | 12.7 | 0.214 | 0.0718 | 0.331 | -1.16 | -8.72 | 0.566 | 11.5 | 28.9 | 3963 | -- | -- |
| 58.17 | 0.355 | 12.5 | 1.71 | 0.0463 | -0.523 | -1.16 | -- | 0.83 | 10.6 | 28.9 | 7126 | -- | -- |
| 54.84 | 0.345 | 12.7 | 0.333 | 0.25 | 0.253 | -- | -7.54 | 0.601 | 16.3 | 29.16 | 4497 | -- | -- |
| 58.96 | 0.358 | 12.5 | 1.66 | 0.319 | -0.632 | -- | -- | 0.75 | 16.8 | 26.6 | 1672 | -- | -- |
| 58.04 | 0.355 | 12.7 | 0.349 | -- | 0.215 | -- | -7.48 | 0.579 | -- | 29 | 4312 | -- | -- |
| 72.98 | 0.4 | 12.5 | 1.51 | 0.25 | -- | -0.791 | -- | 0.753 | 14 | -- | -- | -- | -- |
| 74.22 | 0.403 | 12.5 | 1.49 | 0.299 | -- | -- | -- | 0.751 | 16 | -- | -- | -- | -- |
| 59.43 | 0.359 | 12.4 | 1.77 | -- | -0.793 | -- | -- | 1.06 | -- | 32.56 | 12930 | -- | -- |
| 128.31 | 0.528 | 12.6 | -- | 0.274 | -0.389 | -- | -- | 0.529 | 16.4 | 29.21 | 1805 | -- | -- |
| 79.11 | 0.416 | 12.5 | 1.48 | -- | -- | -- | -- | 0.743 | -- | -- | -- | -- | -- |
| 132.92 | 0.539 | 12.5 | -- | 0.27 | -- | -- | -- | 0.585 | 16 | -- | -- | -- | -- |
| 130.93 | 0.533 | 12.6 | -- | -- | -0.402 | -- | -- | 0.498 | -- | 30.6 | 4062 | -- | -- |
| 136.9 | 0.546 | 12.5 | -- | -- | -- | -- | -- | 0.579 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.73 | temperature | 30 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 2 | 51.74 | temperature | 30 | 4320 | > th | dose independent | rect. | 18 | 20 |
| 5 | 51.94 | temperature | 30 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 8 | 51.95 | temperature | 30 | 4320 | < th | dose independent | sin | 7 | NA |
| 12 | 51.95 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 18 |
| 14 | 51.96 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 27 | 51.96 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 16 |
| 37 | 52.00 | temperature | 30 | 4320 | > th | dose independent | sin | 7 | NA |
| 200 | 52.31 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 235 | 52.36 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 253 | 52.42 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |
| 254 | 52.42 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 256 | 52.42 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 352 | 52.45 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 16 |
| 353 | 52.45 | temperature | 30 | 4320 | < th | dose independent | rect. | 7 | 16 |
| 374 | 52.46 | temperature | 30 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 375 | 52.46 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 13 |
| 441 | 52.47 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 442 | 52.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 11 |
| 477 | 52.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 23 |
| 493 | 52.49 | temperature | 30 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 627 | 52.58 | temperature | 30 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 711 | 52.71 | temperature | 30 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 762 | 52.80 | temperature | 30 | 4320 | > th | dose dependent | sin | 10 | NA |
| 784 | 52.82 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 785 | 52.82 | temperature | 30 | 4320 | > th | dose dependent | rect. | 15 | 22 |
| 791 | 52.85 | temperature | 30 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 851 | 52.89 | temperature | 30 | 4320 | > th | dose dependent | sin | 17 | NA |
| 872 | 52.90 | temperature | 30 | 4320 | > th | dose dependent | no | NA | NA |
| 874 | 52.90 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 11 |
| 972 | 52.91 | temperature | 30 | 1440 | > th | dose dependent | sin | 7 | NA |
| 996 | 52.92 | temperature | 30 | 4320 | > th | dose dependent | rect. | 12 | 7 |