Os03g0265500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Coronatine-insensitive 1.
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Os03g0265500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Coronatine-insensitive 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.94 | 0.225 | 11.9 | 0.75 | 0.683 | -0.519 | 0.324 | 0.718 | 0.0996 | 17.3 | 15.4 | 721 | -- | -- |
| 23.16 | 0.226 | 11.9 | 0.602 | 0.763 | -0.59 | 0.239 | -- | 0.0707 | 16.2 | 15.4 | 721 | -- | -- |
| 23.16 | 0.224 | 11.9 | 0.757 | 0.692 | -0.497 | -- | 0.843 | 0.102 | 17.2 | 15.63 | 669 | -- | -- |
| 23.32 | 0.226 | 11.9 | 0.603 | 0.763 | -0.586 | -- | -- | 0.0713 | 16.2 | 15.4 | 721 | -- | -- |
| 42.32 | 0.303 | 11.9 | 0.727 | -- | -0.464 | -- | 0.295 | 0.0842 | -- | 14.14 | 2632 | -- | -- |
| 26.82 | 0.243 | 11.9 | 0.484 | 0.613 | -- | 0.226 | -- | -0.0162 | 16.7 | -- | -- | -- | -- |
| 26.95 | 0.243 | 11.9 | 0.485 | 0.613 | -- | -- | -- | -0.015 | 16.7 | -- | -- | -- | -- |
| 42.41 | 0.303 | 11.9 | 0.651 | -- | -0.463 | -- | -- | 0.0658 | -- | 14.82 | 2646 | -- | -- |
| 31.99 | 0.265 | 11.9 | -- | 0.684 | -0.295 | -- | -- | -0.0293 | 16.4 | 17 | 707 | -- | -- |
| 46.93 | 0.32 | 11.9 | 0.462 | -- | -- | -- | -- | -0.0311 | -- | -- | -- | -- | -- |
| 33.15 | 0.269 | 11.9 | -- | 0.604 | -- | -- | -- | -0.0691 | 16.7 | -- | -- | -- | -- |
| 49.87 | 0.329 | 11.9 | -- | -- | -0.228 | -- | -- | -0.126 | -- | 33.79 | 2631 | -- | -- |
| 52.55 | 0.338 | 11.9 | -- | -- | -- | -- | -- | -0.0823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 3 | 20.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 5 | 20.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 17 | 21.23 | temperature | 30 | 30 | < th | dose dependent | rect. | 22 | 21 |
| 36 | 21.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 12 |
| 61 | 21.74 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 111 | 21.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 9 |
| 192 | 22.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 193 | 22.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 201 | 22.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 220 | 22.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 15 |
| 258 | 22.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 12 |
| 274 | 22.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 324 | 22.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 361 | 22.45 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 369 | 22.46 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 384 | 22.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 9 |
| 398 | 22.50 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 424 | 22.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 458 | 22.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 11 |
| 462 | 22.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 470 | 22.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 502 | 22.63 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 519 | 22.65 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 612 | 22.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 614 | 22.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 629 | 22.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 699 | 22.79 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 718 | 22.79 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 719 | 22.79 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 777 | 22.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 859 | 22.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 885 | 22.89 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 9 |
| 922 | 22.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 939 | 22.92 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 961 | 22.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 988 | 22.94 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 2 |
| 992 | 22.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 1 |