BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0123200 Os05g0123200|AK066395
(304 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0123200 IQ calmodulin-binding region domain containing... 417 e-117
Os01g0833800 IQ calmodulin-binding region domain containing... 198 3e-51
Os03g0648300 IQ calmodulin-binding region domain containing... 119 3e-27
Os01g0194200 IQ calmodulin-binding region domain containing... 117 1e-26
Os12g0619000 IQ calmodulin-binding region domain containing... 117 1e-26
Os06g0155300 IQ calmodulin-binding region domain containing... 107 2e-23
Os05g0463300 IQ calmodulin-binding region domain containing... 105 3e-23
Os03g0787200 IQ calmodulin-binding region domain containing... 104 1e-22
Os05g0541100 IQ calmodulin-binding region domain containing... 98 9e-21
Os08g0115200 IQ calmodulin-binding region domain containing... 97 2e-20
Os01g0708700 IQ calmodulin-binding region domain containing... 72 5e-13
Os01g0896200 Conserved hypothetical protein 66 3e-11
>Os05g0123200 IQ calmodulin-binding region domain containing protein
Length = 304
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/304 (71%), Positives = 218/304 (71%)
Query: 1 MGKKGKWFGAVKKVFSPESXXXXXXXXXXXXAASNPNPPDLTPSASLXXXXXXXXXXXXX 60
MGKKGKWFGAVKKVFSPES AASNPNPPDLTPSASL
Sbjct: 1 MGKKGKWFGAVKKVFSPESKEKKEERLRRKLAASNPNPPDLTPSASLEVNVSVPPPPPPP 60
Query: 61 XXXXXXXXXXXXXXXXXSKHVTXXXXXXXXXXXXQTSSLPPGVSREEQATIKIQTAFRGY 120
SKHVT QTSSLPPGVSREEQATIKIQTAFRGY
Sbjct: 61 PVQQIEEVKVPEVEQEQSKHVTVEAVPEAVPVPAQTSSLPPGVSREEQATIKIQTAFRGY 120
Query: 121 XXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQSQIRSRRLKMSEENXXXX 180
KSLVEGNSVKRQAASTLRCMQTLARVQSQIRSRRLKMSEEN
Sbjct: 121 LARRALRALRGLVRLKSLVEGNSVKRQAASTLRCMQTLARVQSQIRSRRLKMSEENQALQ 180
Query: 181 XXXXXXXXXXXXXMGEQWDDSTQSKEQIEASLISRQEAAVRRERALAYAFSHQWKSTSRS 240
MGEQWDDSTQSKEQIEASLISRQEAAVRRERALAYAFSHQWKSTSRS
Sbjct: 181 RQLLLKQELESLRMGEQWDDSTQSKEQIEASLISRQEAAVRRERALAYAFSHQWKSTSRS 240
Query: 241 VNPMFVDPNNPQWGWSWLERWMAAKPWEGRAGTDKESNLDRASAKSASLNLGEGEITKAF 300
VNPMFVDPNNPQWGWSWLERWMAAKPWEGRAGTDKESNLDRASAKSASLNLGEGEITKAF
Sbjct: 241 VNPMFVDPNNPQWGWSWLERWMAAKPWEGRAGTDKESNLDRASAKSASLNLGEGEITKAF 300
Query: 301 NSLR 304
NSLR
Sbjct: 301 NSLR 304
>Os01g0833800 IQ calmodulin-binding region domain containing protein
Length = 500
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 131/213 (61%), Gaps = 5/213 (2%)
Query: 96 TSSLP--PGVSREEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLR 153
T+++P P S++E A IKIQTAFRGY KSLV+GN+VKRQ A TL
Sbjct: 129 TTAVPKSPVSSKDELAAIKIQTAFRGYLARRALRALRGLVRLKSLVDGNAVKRQTAHTLH 188
Query: 154 CMQTLARVQSQIRSRRLKMSEENXXXXXXXXXXXXXXXXXM--GEQWDDSTQSKEQIEAS 211
C QT+ RVQ+QI SRR+KM EE M E WD S QSKEQ+E S
Sbjct: 189 CTQTMTRVQTQIYSRRVKMEEEKQALQRQLQLKHQRELEKMKIDEDWDHSHQSKEQVETS 248
Query: 212 LISRQEAAVRRERALAYAFSHQWKSTSRSVNPMFVDPNNPQWGWSWLERWMAAKPWEGRA 271
L+ +QEAA+RRERALAYAFSHQWK++ R++ P F D NP WGWSW+ERWM ++PWE R
Sbjct: 249 LMMKQEAALRRERALAYAFSHQWKNSGRTITPTFTDQGNPNWGWSWMERWMTSRPWESRV 308
Query: 272 GTDKESNLDRASAKSASLNLGEGEITKAFNSLR 304
+DK+ D S K+ S + + +A + R
Sbjct: 309 ISDKDPK-DHYSTKNPSTSASRTYVPRAISIQR 340
>Os03g0648300 IQ calmodulin-binding region domain containing protein
Length = 502
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 99/172 (57%), Gaps = 5/172 (2%)
Query: 104 SREEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQS 163
++E+ A IQ+AFR + ++LV G+ +++Q + TL+CMQ L R Q+
Sbjct: 164 TKEDVAATLIQSAFRAFLARRALRALKGIVILQALVRGHIIRKQTSETLQCMQALVRAQA 223
Query: 164 QIRSRRLKMSEENXXXXXX--XXXXXXXXXXXMGEQWDDSTQSKEQIEASLISRQEAAVR 221
++R+R++++S EN + E+W S S E+++A ++ RQEAA +
Sbjct: 224 RVRARQVRVSLENQVARKKVPEQDDHENHVREIEERWCGSIGSVEELQAKVLKRQEAAAK 283
Query: 222 RERALAYAFSHQWKSTSRS---VNPMFVDPNNPQWGWSWLERWMAAKPWEGR 270
RERA+AYA +HQ ++ SR P ++ ++ WG +WLERWMA +PWE R
Sbjct: 284 RERAMAYALTHQRQAGSRQQKPTTPQGLELDDSHWGSNWLERWMAVRPWENR 335
>Os01g0194200 IQ calmodulin-binding region domain containing protein
Length = 442
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 94/186 (50%), Gaps = 22/186 (11%)
Query: 105 REEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQSQ 164
R+E A I++QTAFRG+ +++V G V++QAA TLRCMQ L RVQ++
Sbjct: 107 RQEWAAIRVQTAFRGFLARRALRALKGLVRLQAIVRGRQVRKQAAVTLRCMQALVRVQAR 166
Query: 165 IRSRRLKMSEENXXXXX--XXXXXXXXXXXXMGEQWDDSTQSKEQIEASLISRQEAAVRR 222
IR+RR++MS E E W DS + E + L RQE A++R
Sbjct: 167 IRARRVRMSTEGQAVQKLLEARRTKLDILREAEEGWCDSQGTLEDVRVKLQKRQEGAIKR 226
Query: 223 ERALAYAFSHQWKSTSRS------------------VNPMFVDPNNPQWGWSWLERWMAA 264
ERA+AYA+S Q + ++ + D +N WSWLERWMAA
Sbjct: 227 ERAIAYAYSQQIEGATKCNQQPKPTSYGRLNQSGMLLKHQHFDKSNG--NWSWLERWMAA 284
Query: 265 KPWEGR 270
+PWE R
Sbjct: 285 RPWENR 290
>Os12g0619000 IQ calmodulin-binding region domain containing protein
Length = 442
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 9/174 (5%)
Query: 104 SREEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQS 163
+RE A I IQ+AFR + ++LV G++V++QAA TL+CMQ L R Q+
Sbjct: 90 TRENHAAIVIQSAFRAFLARRALRALKGLVRLQALVRGHAVRKQAAETLQCMQALVRAQA 149
Query: 164 QIRSRRLKMSEENXXXXXXXXXXXXXXXX--XMGEQWDDSTQSKEQIEASLISRQEAAVR 221
++R+RR+++S E+ + E+W D S EQ++A ++ RQEAA +
Sbjct: 150 RVRARRVRISLESQVTQKKASEQNVHEDHVWEIEERWCDGIGSAEQMQAKVLKRQEAAAK 209
Query: 222 RERALAYAFSHQWKSTSR-----SVNPMFVDPNNPQWGWSWLERWMAAKPWEGR 270
RERA+AYA +HQW++ SR ++ + VD N QW +WLERWMAA+PWE R
Sbjct: 210 RERAMAYALTHQWQAGSRKQKAATLQGLEVDEN--QWSQNWLERWMAARPWENR 261
>Os06g0155300 IQ calmodulin-binding region domain containing protein
Length = 353
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 106 EEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQSQI 165
EE A +IQ AFR Y + + N V +Q A+TL +Q+ ++Q++I
Sbjct: 58 EEWAATRIQNAFRCYKAKKTLRCLKGVKRLHIIGQTNPVNKQTAATLNYIQSWNKLQAEI 117
Query: 166 RSRRLKMSEE--NXXXXXXXXXXXXXXXXXMGEQWDDSTQSKEQIEASLISRQEAAVRRE 223
R+RR M E N + +W+ + + E+I + R+EAAV+RE
Sbjct: 118 RNRRAFMVTEGRNRKKKQENQMKLEAKLQNLQVEWNGGSDTMEEILGRIQQREEAAVKRE 177
Query: 224 RALAYAFSHQWKSTS-RSVNPMFVDPNNPQWGWSWLERWMAAKPWEGRAGTDKESNLDRA 282
RA+AYAF+HQW++ S S+ + WGWSW++RW+AA+PWE R+ E NL +
Sbjct: 178 RAMAYAFNHQWRARSATSLGNFNYEVGKGGWGWSWMDRWIAARPWEPRSLVHPE-NLKKG 236
Query: 283 SAK 285
AK
Sbjct: 237 QAK 239
>Os05g0463300 IQ calmodulin-binding region domain containing protein
Length = 538
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 101 PGVSREEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLAR 160
P S EE A +KIQ A R Y L+EG +VKRQ L CMQT+ R
Sbjct: 115 PARSAEELAAVKIQKACRVYLGRRSQRARGLDRLM-LLLEGLAVKRQTYEALYCMQTMTR 173
Query: 161 VQSQIRSRRLKMSEENXXXXXXXXXXXXXXXXXMGEQWDDSTQSKEQIEASLISRQEAAV 220
VQ+QI SRR+K E+ +GE WD QSKEQIE L +QEAA+
Sbjct: 174 VQTQIHSRRVKTEEDKKALKSQVHVKQSLDRIKIGESWDHGHQSKEQIETVLTMKQEAAL 233
Query: 221 RRERALAYAFSHQ 233
RR+RALAYAFSHQ
Sbjct: 234 RRQRALAYAFSHQ 246
>Os03g0787200 IQ calmodulin-binding region domain containing protein
Length = 422
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 136 KSLVEGNSVKRQAASTLRCMQTLARVQSQIRSRRLKMSEENXXXXXX--XXXXXXXXXXX 193
++LV G+ V++QAA TLRCMQ L RVQ+++R+RR++++ E+
Sbjct: 129 QALVRGHIVRKQAAITLRCMQALVRVQARVRARRVRIALESQTDQQAILQEKINETHVRE 188
Query: 194 MGEQWDDSTQSKEQIEASLISRQEAAVRRERALAYAFSHQWKSTSRSVNPMFVDPNNPQW 253
+ + W DS S E I+A L+ RQEAA +RERA+AYA +HQW++ + F P+ W
Sbjct: 189 IEDGWCDSIGSVEDIQAKLLKRQEAAAKRERAMAYALTHQWQARQHAAITAF-QPDKNSW 247
Query: 254 GWSWLERWMAAKPWEGR 270
GW+WLERWMA +PWE R
Sbjct: 248 GWNWLERWMAVRPWESR 264
>Os05g0541100 IQ calmodulin-binding region domain containing protein
Length = 408
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 103 VSREEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQ 162
V R+E A +++Q AFR + ++LV G V+RQ A TL+CM L RVQ
Sbjct: 75 VIRQEWAAVRVQAAFRAFLARRALKALRGIVRLQALVRGRLVRRQLAVTLKCMNALLRVQ 134
Query: 163 SQIRSRRLKMSEE--NXXXXXXXXXXXXXXXXXMGEQWDDSTQSKEQIEASLISRQEAAV 220
+ R RR + S + + EQW DS S ++ + + R +A
Sbjct: 135 ERARERRARCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVA 194
Query: 221 RRERALAYAFSHQWKSTSRSVNP-------MFVDPNNPQWGWSWLERWMAAKPWEGRAGT 273
+RERA+AYA SHQ +S+ +S P + N WS++E WMA KPWE R
Sbjct: 195 KRERAIAYALSHQPRSSKQSARPSSPARSLRNHESNRCNHDWSYIEGWMATKPWESRLME 254
Query: 274 DKESNLDRASAKSASLNLGEGEITKA 299
+ L + S S LNL +++ A
Sbjct: 255 QSHAEL-KCSKNSGELNLAGAQLSNA 279
>Os08g0115200 IQ calmodulin-binding region domain containing protein
Length = 543
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 43/199 (21%)
Query: 105 REEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQSQ 164
RE A I +QTAFRGY ++LV G++V++QA TLRCMQ L RVQ++
Sbjct: 123 REHYAAIVVQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQANMTLRCMQALVRVQAR 182
Query: 165 IRSRRLKMSEENXXXXXXXXXXXXXXXXXMGEQWDDST---------------------- 202
+R +R+++S+++ D ST
Sbjct: 183 VRDQRMRLSQDSISLSAAAASAAPCGSSKSSYSVDTSTFWDSKYTHDFAAADRRSIERSR 242
Query: 203 ---------------QSKEQIEASLISRQEAAVRRERALAYAFSHQ-WKSTSRSVNPMFV 246
++ E+I+A L +R++AA++RERAL+YAFSHQ W++ + SV M V
Sbjct: 243 DGSSFAAGDDWDDRPRTIEEIQAMLQTRKDAALKRERALSYAFSHQIWRNPAPSVEEMDV 302
Query: 247 DPNNPQWGWSWLERWMAAK 265
D P+W ERWMA++
Sbjct: 303 D-GQPRWA----ERWMASR 316
>Os01g0708700 IQ calmodulin-binding region domain containing protein
Length = 441
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 105 REEQATIKIQTAFRGYXXXXXXXXXXXXXXXKSLVEGNSVKRQAASTLRCMQTLARVQSQ 164
R+E A ++IQTAFR + ++LV G V++Q A TL+CMQ L RVQ++
Sbjct: 85 RQEWAAVRIQTAFRAFLARRALRALRGIVRLQALVRGRRVRKQLAVTLKCMQALVRVQAR 144
Query: 165 IRSRRLKMSEENXXXXXXXXXXXXXXXXXMGEQ--WDDSTQSKEQIEASLISRQEAAVRR 222
R RR ++S + + W DS + + + + + R E A++R
Sbjct: 145 ARDRRARISADGLDSQDMLDERGGRVDHVKEAEAGWCDSQGTADDVRSKIHMRHEGAIKR 204
Query: 223 ERALAYAFSHQWKST--SRSVNPMFVDPNN------PQWGWSWLERWMAAKPWEGR 270
ERA YA SHQ S R +P ++ WS+LE WMA KPWE R
Sbjct: 205 ERARTYAQSHQRCSNHGGRPSSPAVSLKHHGNGATRSNHSWSYLEGWMATKPWESR 260
>Os01g0896200 Conserved hypothetical protein
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 152 LRCMQTLARVQSQIRSRRLKMSEENXXXXXXXXXXXXX---XXXXMGEQWDDSTQSKEQI 208
+RCMQ L RVQSQ+R+ R++ E G W+DS S++++
Sbjct: 1 MRCMQMLVRVQSQVRASRVEAMERRNRHHHAAMLRDAARWRAASQDGGIWEDSLLSRDEM 60
Query: 209 EASLISRQEAAVRRERALAYAFSHQ-WKSTSRSVNPMFVD---PNNPQWGWSWLER 260
+A + EA ++RERALAYA+SHQ K+T + + + D NP W W+ +ER
Sbjct: 61 DARTKRKVEAVIKRERALAYAYSHQLLKATPMAAHAILADLQSGRNPWW-WTPIER 115
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.310 0.122 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,963,048
Number of extensions: 197577
Number of successful extensions: 397
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 378
Number of HSP's successfully gapped: 13
Length of query: 304
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 204
Effective length of database: 11,814,401
Effective search space: 2410137804
Effective search space used: 2410137804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 156 (64.7 bits)